Details from NCBI annotation

Gene Symbol Msh4
Gene Name mutS homolog 4 (E. coli)
Entrez Gene ID 101709577

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MSH4 ENSCPOG00000001103 (Guinea pig)

Gene Details

mutS homolog 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000998, Guinea pig)

Protein Percentage 93.54%
CDS Percentage 93.47%
Ka/Ks Ratio 0.17042 (Ka = 0.033, Ks = 0.1938)

MSH4 ENSG00000057468 (Human)

Gene Details

mutS homolog 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000263187, Human)

Protein Percentage 90.26%
CDS Percentage 90.4%
Ka/Ks Ratio 0.18535 (Ka = 0.0551, Ks = 0.2975)

Msh4 ENSMUSG00000005493 (Mouse)

Gene Details

mutS homolog 4 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005630, Mouse)

Protein Percentage 83.51%
CDS Percentage 80.48%
Ka/Ks Ratio 0.13253 (Ka = 0.105, Ks = 0.7924)

Msh4 ENSRNOG00000010431 (Rat)

Gene Details

mutS homolog 4 (E. coli) (Msh4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014106, Rat)

Protein Percentage 85.29%
CDS Percentage 82.47%
Ka/Ks Ratio 0.1154 (Ka = 0.0834, Ks = 0.7226)

Genome Location

Sequence Coding sequence

Length: 2808 bp    Location: 21167398..21099915   Strand: -
>XM_004841428.1
ATGCTAAGGCCGGACGTCTCGTCCACCACCCCCTCCGCCCCCGCTGCGTCTTCCTCATCGTCGGGAGGGGCTCCCCTACAGGGTCTGCGCCCCTTTCTCGGGCCCCAGGAGATTCCTGCCAGCCGCCGTTCCGCGCAGGCCTCGATCTCCTCCCAGCCGGGCTCTTCGGGGGGCGCGGGCGATCGCAGCAGCAGCAGCAGCACCGGGTGCCCGGGCTTCCCCGAGAGCTGCCCGGCGCCAGGTTCCTACTTTGGAAACAAAAGATCTTACGCAGCAAATGTAGTTACATCAAATTTTACTTTTGGTACCAGCTCATCTTCTGCACGAGAAACTAATTGTCCTCAAGTACTTAAAACTCCATTGTCTGCTGGAAATCCCCAGAGATCAGGTTACAAAAGTTGGACACCACAAATGGGACATTCAGCTACATCTTCCTCTTCAGTTTCTGCACATTCCCCATCAGTTATTGTGGCTGTGGTAGAAGGGAGAGGACTTGCCAGAGGTGAAATAGGAATGGCAAGTATTGACTTAAAATGCCCACAGATTATACTCTCCCAGTTTGCAGACAACACCACATATGCAAAGGTGATCACTAAACTCAAAATTTTATCACCTTTGGAAATCATAATGTCAAATACTGCTTGTGTTGTGGGAAATTCAACCAAGTTATTTACTCTTATCACAGAAAATTTCAAGAATGTTAACTTCACTACTATCCAAAGGAAATACTTCAATGAAACAAAAGGATTAGAGTACATTGAACAGCTGTGCATAGCAGAATTCAGCACTGTCCTATTGGAAGTTCAATCCAAGTATTACTGCCTTGCAGCTCTTGCAGCTTTGTTAAAATATGTTGAGTTTATTCAGAATTCAGTTTATGCACCAAAATCGCTGAAGATTTGTTTCCAGGGTAGTGAGCAGACAGCCATGATAGATTCAGCATCAGCCCAAAACCTTGAATTGTTAATTAATAATCAAGACAGTAGGAATAATCACACTCTCTTTGGTGTTCTAAATTATACTAAGACTCCCGGAGGGAGTAGAAGACTTCGTTCTAATATATTAGAGCCACTAGTTGATACTGAAACCATTAACATGAGATTAGATTGTGTTCAAGAACTACTTCAAGATGAGGGACTCTTTTTTGGCCTGAAATCAGTTATATCAAAATTCCTCGATACAGAACAGCTTCTTTCTGTTTTAGTCCAAATTCCAAAGCAAGACACGGTTAATGCAGCTGAATCAAAGATAACAAATTTAATATACCTAAAACATACCTTGGAACTTGTGGCTCCTTTAAAGACCTCTCTGAAGAACTGTAACACACCTTTATTAAAAGCTTACTATGGTTCCTTGGAAGACACAAGGTTCGAAATCATACTTGAAAAGATTAAAACAGTAATTAATGACGATGTAAGGTACATGAAAGGATACCTAAACATGAGGACTCAGAAGTGCTATGCAGTGAGGTCTAACATAAATGAATTTCTTGACATAGCTAGAAGGACATATACAGAGATTGTAGACGACATAGCAGGGATGATATCACAGCTTGCAGACAAATATAATCTCCCTCTAAGGACAAGTTTTAGCTCTGCTCGAGGATTTTTTATCCAGATGACTACAGATTCTGCAGTGCTACCCAGTGATCAGCTTCCTTCCGAATTTATCAAGATTTCTAAAGTGAAAAATTCTTACAGCTTTACATCAACAGATTTAATTAAAATGAATGAAAGATGCCAAGAGTCTTTGAGAGAAATTTATCACATGACTTATATGGTTGTGTGCAAACTGCTTAGTGAGATATATGAACACATTCACTGCTTATACAAACTCTCTGACACCGTGTCCATGCTGGATATGCTGCTGTCATTTGCTCATGCCTGCACTCTGTCTGACTATGTTCGGCCAGAGTTTACCGATACTTTAGCAATCAAACAGGGATGGCATCCCATTCTTGAAAAAATATCTGTGGAAAAACCAGTTGCTAATAATACCTATATAACAGAAGGCAGTAATTTTTTGATCATAACTGGACCAAATATGAGTGGGAAATCCACATATTTAAAGCAGATTGCTCTTTGTCAAATTATGGCCCAGATTGGATCCTATGTTCCAGCAGAATATTCTTCCTTTAGAATTGCTGAACAGATTTTTACAAGAATCAGCACTGATGATGATATTGAAACAAATTCATCAACATTTATGAAGGAAATGAAAGAGATAGCATACATTCTGCATAATGCCAATCACAAATCACTCATATTAATTGATGAACTTGGCAGAGGTACTAATACAGAAGAAGGCATTGGCATTTGTTATGCTGTTTGTGAATATCTGCTGAGCTTAAAGGCATTTACACTGTTTGCTACACATTTCCTGGAACTTTGTCATATCGATGTCCTGTATCCTAATGTAGAAAACATGCATTTTGAAGTTCAGCATGTAAAGAACACCTCAAGAAATAAAGAAGCAATTTTGTATACCTACAAACTTTCTAAGGGACTTACAGAAGAAAAAAATTATGGATTAAAAGCTGCAGAGGTGTCATCACTTCCACTGTCAATTGTCTTGGATGCCAAAGAAATCACAACTCAAATTACAAGACAAATTTTGCACAACCAAAGGAGTACCCCTGAGATGGAAAGACAGAGAGCTGTGTACCATCTAGCAACCAGACTTGTTCAAGCTGCTCGAAACTCTCGATTGGATCCAGACAGTTTACGAATGTATTTAAGTAAGCTCAAGAAGAAGTATGAAGAAGATCTTTCCAGGGCTGAACAAGTTTCAGAAAAGACTGAAGAATAA

Related Sequences

XP_004841485.1 Protein

Msh4 PREDICTED: mutS protein homolog 4 [Heterocephalus glaber]

Length: 935 aa      View alignments
>XP_004841485.1
MLRPDVSSTTPSAPAASSSSSGGAPLQGLRPFLGPQEIPASRRSAQASISSQPGSSGGAGDRSSSSSTGCPGFPESCPAPGSYFGNKRSYAANVVTSNFTFGTSSSSARETNCPQVLKTPLSAGNPQRSGYKSWTPQMGHSATSSSSVSAHSPSVIVAVVEGRGLARGEIGMASIDLKCPQIILSQFADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENFKNVNFTTIQRKYFNETKGLEYIEQLCIAEFSTVLLEVQSKYYCLAALAALLKYVEFIQNSVYAPKSLKICFQGSEQTAMIDSASAQNLELLINNQDSRNNHTLFGVLNYTKTPGGSRRLRSNILEPLVDTETINMRLDCVQELLQDEGLFFGLKSVISKFLDTEQLLSVLVQIPKQDTVNAAESKITNLIYLKHTLELVAPLKTSLKNCNTPLLKAYYGSLEDTRFEIILEKIKTVINDDVRYMKGYLNMRTQKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLADKYNLPLRTSFSSARGFFIQMTTDSAVLPSDQLPSEFIKISKVKNSYSFTSTDLIKMNERCQESLREIYHMTYMVVCKLLSEIYEHIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKISVEKPVANNTYITEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAEQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANHKSLILIDELGRGTNTEEGIGICYAVCEYLLSLKAFTLFATHFLELCHIDVLYPNVENMHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKNYGLKAAEVSSLPLSIVLDAKEITTQITRQILHNQRSTPEMERQRAVYHLATRLVQAARNSRLDPDSLRMYLSKLKKKYEEDLSRAEQVSEKTEE