Details from NCBI annotation

Gene Symbol Fubp1
Gene Name far upstream element (FUSE) binding protein 1, transcript variant X1
Entrez Gene ID 101700128

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FUBP1 ENSCPOG00000002757 (Guinea pig)

Gene Details

far upstream element (FUSE) binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018949, Guinea pig)

Protein Percentage 99.55%
CDS Percentage 96.34%
Ka/Ks Ratio 0.01849 (Ka = 0.0028, Ks = 0.1515)

FUBP1 ENSG00000162613 (Human)

Gene Details

far upstream element (FUSE) binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000359804, Human)

Protein Percentage 99.22%
CDS Percentage 93.37%
Ka/Ks Ratio 0.01112 (Ka = 0.0036, Ks = 0.3201)

Fubp1 ENSMUSG00000028034 (Mouse)

Gene Details

far upstream element (FUSE) binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130145, Mouse)

Protein Percentage 98.6%
CDS Percentage 90.91%
Ka/Ks Ratio 0.01551 (Ka = 0.0072, Ks = 0.464)

Fubp1 ENSRNOG00000043370 (Rat)

Gene Details

far upstream element (FUSE) binding protein 1 (Fubp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061544, Rat)

Protein Percentage 99.37%
CDS Percentage 90.92%
Ka/Ks Ratio 0.00566 (Ka = 0.0029, Ks = 0.504)

Genome Location

Sequence Coding sequence

Length: 2007 bp    Location: 19279533..19308579   Strand: +
>XM_004841401.1
ATGGCTGACTATTCAACAGTGCCTCCACCTTCCTCTGGCTCCGCTGGTGGTGGTGGCGGTGGCGGCGGTGGTGGAGGAGTTAACGATGCTTTCAAAGATGCGCTACAGAGAGCCCGGCAGATTGCAGCAAAAATTGGGGGTGATGCTGGTACATCATTGAATTCAAATGACTATGGTTATGGGGGACAAAAAAGGCCTTTAGAAGATGGAGATGGCTCTTGGACAAGTCCGAGCAGTACAACACACTGGGAGGGAATGCCCTCTCCTTTTAAAGATCAACCAGATGCTAAGAAAGTTGCTCCTCAAAATGATTCTTTTGGATCACAGTTACCACCGATGCACCAGCAGCAAAGCAGATCTGTGATGACAGAAGAATACAAAGTTCCAGATGGAATGGTTGGCTTTATAATTGGCAGAGGAGGTGAACAAATCTCACGCATTCAACAGGAATCTGGATGCAAAATACAGATAGCTCCTGACAGTGGTGGCCTTCCAGAAAGGTCTTGTATGTTAACTGGAACACCTGAATCTGTCCAATCAGCAAAACGGTTACTGGACCAGATTGTCGAAAAGGGCAGACCAGCCCCTGGCTTTCATCATGGCGATGGACCTGGAAATGCAGTTCAAGAAATCATGATTCCAGCTAGCAAGGCAGGATTAGTTATTGGAAAGGGAGGAGAGACTATTAAACAGCTGCAGGAACGGGCCGGAGTTAAAATGGTTATGATTCAAGATGGGCCTCAGAACACTGGTGCTGACAAACCTCTTAGGATTACAGGAGACCCATACAAAGTTCAACAAGCCAAGGAAATGGTGTTAGAGTTAATTCGTGATCAAGGTGGTTTCAGAGAAGTTCGAAATGAGTATGGGTCAAGAATAGGAGGAAATGAAGGGATAGATGTCCCCATTCCAAGATTTGCTGTTGGCATTGTAATAGGAAGAAATGGAGAGATGATTAAAAAAATACAAAATGATGCTGGTGTTCGAATTCAGTTTAAGCCAGATGATGGAACAACACCTGATAGAATAGCTCAAATAACCGGACCTCCAGATCGATGTCAACATGCTGCAGAAATTATCACAGATCTTCTTCGAAGTGTTCAGGCTGGTAATCCTGGTGGACCTGGACCTGGTGGTCGAGGAAGAGGTAGAGGTCAAGGCAACTGGAACATGGGGCCACCGGGCGGACTACAGGAATTTAATTTCATTGTGCCAACTGGGAAGACTGGATTAATCATAGGAAAAGGAGGTGAGACCATAAAAAGCATAAGCCAACAATCTGGTGCCAGAATAGAGCTTCAGAGAAATCCTCCACCTAATGCAGACCCTAACATGAAGCTATTTACAATTCGTGGTACTCCCCAGCAAATAGACTACGCTCGGCAACTCATAGAAGAAAAGATTGGTGGCCCTGTAAATCCTTTAGGGCCACCTGTACCCCATGGGCCCCATGGTGTCCCAGGCCCCCATGGGCCTCCTGGGCCTCCAGGGCCTGGAACTCCAATGGGACCGTACAATCCTGCACCTTATAATCCAGGACCACCTGGCCCAGCTCCTCATGGTCCTCCAGCCCCATATGCTCCCCAGGGGTGGGGGAATGCATATCCACATTGGCAGCAACAGGCTCCTCCTGATCCAGCCAAGGCAGGAACGGATCCAAATTCAGCAGCTTGGGCTGCTTATTATGCTCACTATTATCAACAACAAGCACAGCCACCACCTGCAGCACCTACAGGCGCACCAACTCCAACCCAGACGAATGGACAAGGTAACTATGGAGATCAACAGAATCCAGCTCCAGCTGGACAGGTGGATTATACCAAGGCCTGGGAAGAATACTACAAGAAAATGGGTCAAGCGGTTCCTGCGCCTGCTGGTGCGCCCCCCGGTGGCCAGCCTGATTACAGCGCAGCCTGGGCTGAGTACTATAGACAGCAGGCCGCCTACTATGCTCAAACAAGTCCCCAGGGCATGCCGCAGCACCCGCCTGCACCTCAGGGCCAATAA

Related Sequences

XP_004841458.1 Protein

Fubp1 PREDICTED: far upstream element-binding protein 1 isoform X1 [Heterocephalus glaber]

Length: 668 aa      View alignments
>XP_004841458.1
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGSQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPTGAPTPTQTNGQGNYGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ