Details from NCBI annotation

Gene Symbol Ssx2ip
Gene Name synovial sarcoma, X breakpoint 2 interacting protein, transcript variant X3
Entrez Gene ID 101716792

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SSX2IP ENSCPOG00000012045 (Guinea pig)

Gene Details

synovial sarcoma, X breakpoint 2 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010835, Guinea pig)

Protein Percentage 94.82%
CDS Percentage 94.21%
Ka/Ks Ratio 0.14861 (Ka = 0.0263, Ks = 0.1767)

SSX2IP ENSG00000117155 (Human)

Gene Details

synovial sarcoma, X breakpoint 2 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000340279, Human)

Protein Percentage 93.79%
CDS Percentage 92.32%
Ka/Ks Ratio 0.094 (Ka = 0.0288, Ks = 0.3063)

Ssx2ip ENSMUSG00000036825 (Mouse)

Gene Details

synovial sarcoma, X breakpoint 2 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101759, Mouse)

Protein Percentage 87.42%
CDS Percentage 84.48%
Ka/Ks Ratio 0.08576 (Ka = 0.063, Ks = 0.7343)

Ssx2ip ENSRNOG00000015425 (Rat)

Gene Details

synovial sarcoma, X breakpoint 2 interacting protein (Ssx2ip), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043877, Rat)

Protein Percentage 87.07%
CDS Percentage 83.85%
Ka/Ks Ratio 0.08827 (Ka = 0.0668, Ks = 0.7572)

Genome Location

Sequence Coding sequence

Length: 1839 bp    Location: 12822716..12860495   Strand: +
>XM_004841364.1
ATGGGAGATTGGATGACTGTTACAGAACCAGGTCTGTGTGCAGAAAGCAACAATATCTCTCAATATACCTCAGAAACAAAGATGTCTCCATCAAGTTTATACTTACAGCAAGTGCTATGTTCTTCAATACCTTTATCAAAAAATGTACACAGTTTTTTCAGTGCCTTCTGCACAGAAGAGAATATTGAACAAAGTATTTCATATCTTGATCAGGAATTGACTACTTTTGGGTTTCCTTCATTGTATGAAGAACCCAAAAGTAAAGAAGCAAAGAGAGAATTGAATATAGTTGCTGTTTTAAATTGTATGAATGAGCTACTTGTACTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAAACACAGAATCTGAAACTGGGAAGTGATATGGACCATCTTCAGAGCTGCTATGCAAAACTTAAGGAACAACTGGAAACTTCCAGGAGGGAAATTATTGGGCTTCAGGAGAGAGACAGACAGTTACAGTGCAAGAACAGGAATTTGCATCAGCTACTGAAAAATGAGAAGGATGAGGTACAAAAATTACAAAATATCATTGCAAGTCGAGCTACTCAGTATAATCATGATATGAAAAGAAAAGAGCGTGAATATAATAAATTAAAAGAACGTCTACATCAACTTGTTATGAACAAAAAGGATAAAAAAATAGCCATGGATGTTTTAAACTACGTGGGCAGAGCAGATGGAAAACGGGGCTCCTGGAGGACTGGTAAAACAGAAGCCAGGAACGAGGATGAAATGTATAAAATTCTCTTAAATGATTATGAATACCGTCAGAAACAAATCCTAATGGAAAATGCTGAACTTAAGAAGGTTCTTCAGCAAATGAAAAAGGAAATGATTTCTCTTCTTTCTCCCCAAAAGAAGAAACCTAGAGAAAGAGAAGATGAAAGTACAGGAACTGTTATCTCTGATGTTGAAGAAGATGCCGGGGAACTGAGTAGAGAGAGCATGTGGGACCTCTCCTGTGAAACTGTGAGAGAGCAACTTACAAACAGCATCAGAAAACAGTGGAGAATTTTGAAAAGTCATGTAGAAAAACTTGACAACCAAGTTTCAAAGGTACACTTGGAAGGTTTTAACGATGAAGATGTAATATCACGACAAGATCATGAACAAGAAACTGAGAAACTGGAGTTAGAAATTCAACAATGTAAAGAAATGATTAAAACGCAGCAGCAACTTTTACAGCAGTTCGCTACTGCATGTGATGATGATACCACTTCACTATTACGAGACTGCTATTTGTTGGAAGAAAAGGAACGCCTTAAAGAAGAATGGTCCCTTTTTAAAGAGCAAAAAAAGAATTTTGAGAGAGAAAGACGAAGCTTTACAGAAGCGGCTATTCGCCTAGGATTGGAGAGAAAGGCATTTGAAGAAGAACGAGCCAGTTGGTTAAAGCAACAGTTTTTAAATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCCCAGGAAGTTCTGATCAGGACAATCTTACAGTGCACTCAAGGCCACGGCAAAAGAAGCTTCACAGTGTGTCTCATGGGTCTGCAATTTGCACATCTAAAATGACTAAGTCTCTGCCTGCTTCTCCTACTTCAGACTTTTGCCAGACACGTTCCTATGTATCTGAACATAGTTCAGTCAATGTGCTGAATATAACTCCTGAAGAGATGAAACCAAATCAGGTCGGAAGAGAATGTAGCAATCAGACGTGGAGCGTGGCATCCAGGCCTAGATCACAGGAAGGTTGCTACAGCGGATGCTCTTTGACCTACACAAATTCTCATGTAGAAAAAGATGACTTACCTTAG

Related Sequences

XP_004841421.1 Protein

Ssx2ip PREDICTED: afadin- and alpha-actinin-binding protein isoform X3 [Heterocephalus glaber]

Length: 612 aa      View alignments
>XP_004841421.1
MGDWMTVTEPGLCAESNNISQYTSETKMSPSSLYLQQVLCSSIPLSKNVHSFFSAFCTEENIEQSISYLDQELTTFGFPSLYEEPKSKEAKRELNIVAVLNCMNELLVLQRKNLLAQENVETQNLKLGSDMDHLQSCYAKLKEQLETSRREIIGLQERDRQLQCKNRNLHQLLKNEKDEVQKLQNIIASRATQYNHDMKRKEREYNKLKERLHQLVMNKKDKKIAMDVLNYVGRADGKRGSWRTGKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKKKPREREDESTGTVISDVEEDAGELSRESMWDLSCETVREQLTNSIRKQWRILKSHVEKLDNQVSKVHLEGFNDEDVISRQDHEQETEKLELEIQQCKEMIKTQQQLLQQFATACDDDTTSLLRDCYLLEEKERLKEEWSLFKEQKKNFERERRSFTEAAIRLGLERKAFEEERASWLKQQFLNMTTFDHQNSENVKLFSAFPGSSDQDNLTVHSRPRQKKLHSVSHGSAICTSKMTKSLPASPTSDFCQTRSYVSEHSSVNVLNITPEEMKPNQVGRECSNQTWSVASRPRSQEGCYSGCSLTYTNSHVEKDDLP