Details from NCBI annotation

Gene Symbol Syde2
Gene Name synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
Entrez Gene ID 101714114

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYDE2 ENSCPOG00000001552 (Guinea pig)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001404, Guinea pig)

Protein Percentage 86.76%
CDS Percentage 90.43%
Ka/Ks Ratio 0.33677 (Ka = 0.0723, Ks = 0.2148)

SYDE2 ENSG00000097096 (Human)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000340594, Human)

Protein Percentage 83.07%
CDS Percentage 88.52%
Ka/Ks Ratio 0.39366 (Ka = 0.0927, Ks = 0.2354)

Syde2 ENSMUSG00000036863 (Mouse)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041897, Mouse)

Protein Percentage 75.43%
CDS Percentage 78.16%
Ka/Ks Ratio 0.20529 (Ka = 0.1477, Ks = 0.7195)

Syde2 ENSRNOG00000026186 (Rat)

Gene Details

Protein Syde2-ps1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031789, Rat)

Protein Percentage 71.77%
CDS Percentage 75.51%
Ka/Ks Ratio 0.23247 (Ka = 0.1825, Ks = 0.785)

Genome Location

Sequence Coding sequence

Length: 3588 bp    Location: 12299731..12344698   Strand: +
>XM_004841353.1
ATGCACGACCTGCCCCCGGACTCCGGCTCGCGGCGGGGCGGCGGGGGCTCGGCGGATCGGGGCGGCACCTCGGAAGCCCGGGTTGCGGGCCTGCCGCCTTTTCCCCGCGGCGCCGCGAACAGCCCCGTCTGCCGCCGGGACCTGGAGCTGGGAGGCGGAGACCGATCCGGGCAACAGGTGTCCCCGCCCTGGTCTCCTCCGCGGGAGTCGGGGTACGGCCGGTTGCGCTGTCCTCGGATGCCGCTGTCCCGCAGCAGAAGCCTCGAGAGTCTCCAGGTGGGTGCCAAGCTGCCTCCCTTGCAGCGGTGGCCGAGCGACAGCTGGATCAGGTGGGGCGCTCGCGAGGACCGGGAAGAGCCCCCGCCACGTGGAGGCGGGATGGACGGCTGGAGCTGGGGCGGCAGCGCCCGGGCGACGGAGCCCGCCGGCCTCCTGCGTCCCTGCACCCACGGCCCCGGGTGCTCCTCGAGAAGCCCGTTCAGGGATCCTGCGCAGTCCTCTGTGATATTCAGCGGCAAAGACAGCTGCCAGGAGGAGCCCCCCTTCCTCAGACCGCCTGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGTCGCCTGCTGTCCCTGGGAATGAAGGGTCGCACCCGAGGGCCAGCCTCAAAAGTCCCGGGAGCTCGGGCAGCCTCTGCAAATCCGAGCACCCTGAAAGTGCATGGAAACCCTGACCTCTCGGTGCCTCCAGACGAAAGAATCACGCTGACAGAATTATTTGAAGATGTCTATGGGTCTTCAATGAAGAAAAGAGAACTTGAAGATCTGAAGGATAATGTAGAATTCAGAGGTCATAAGCCACTTAACAACATCACTGTTTCAAAAAAACGCAACTGGCTCTATCAGAGTAGTCTGAGAGCTCTTAATCTGGAAGAAGAAAATAAAAAATACCAAAATAGAAGCAATTTATCCATCTCATCTGTGACTCCATCTTACCATCAGCTATCACAGCCTTTTCTTAAATCATCTGAAGAATATTGTACATATATGGTATGTAATGCTACAAGCTCTTCATTATCAAGAAACTGTTCTTTAGATTTTAATGAGGACAATGATGCAGATGATGAAGGAGAAATATGGTACAATCCTATTCCCGAGGATGATGACCTTGGCATGTCAAGTGCCTTGAGTTTTGGAGTGGCAAACACTGCTGTTTTAAAGCTTCCTGTCTCCAGTTTGCACATACCCTCTGGTAGTGACCTAATGAAAGCAGCGCAGTATACTGAAGATTTATTGTGCTCTTCTGAACACATGGGTGATATTCAGAGTATGGAGTTAAATGAAATGAATCCTATAAATTCCATCCATTCCACAGAATTTATACCACAGCACAAGCAAAGGCTAGGACACAAGACACAAGAAGGTATAATGGTGGAGGACAGTCCTGTGTTGAAACCTCCTTTTGCAGGTCCTGGGATCTTAGCCGCTGCAAATAGGACTGAATTGGGAGTTATAGAACCATCTTCACCAAGCCCTACCCCTATTAAAAAAGGCAGTTCAATTAATTGGTCTTTACCAGATAAAATAAAATCTCCACGAACTGTGAGGAAACTTTCCATGAAAATGAAAAAGTTGCCAGAATTTAGTCGAAAGCTAAGTGTTAAGGGAACTTTGAATTATATACACAGCCCAGATAGTACTCCTTCCTTGTCTAAATATAACTGTAGAGAAGTTCATCATGCTGTTATTCTACCTTCTGGGAATACTACCACAGCTGCTAAGAGGAATGTTATAAGCCGGTACCATCTTGATACTACTGTGTCTTCTCAGCACAGCTACCAGAAGAAAACTTTGAATTCAAAGTATTCTTGCCAAGGTGGTTATCTCAGTGATGGAGACTCACCTGAACTTATAACTAAATCTAGCAAACATGGACCTGAAAACAAATTTGGAAAAGGAAAAGAAATCATTCCAAGTAGTTGTAACAAAAATGAAATAGACATAGATGCTTTTAGACATTATAGCTTTTCTGATCAACCTAAGTGTTCACAGTACATATCTGGGCTCATGAGTGTGCATTTCTATGGTGCTGAGGATTTAAAACCCCCTCGGATAGATTCAAAAGATGTCTTTTGTGCAATTCAGGTAGATTCAGTAAACAAAGCAAGAACAGCTTTGCTCACATGTCGGACAACGTTTTTAGACATGGATCACACTTTCAACATAGAAATTGAAAATGCACAACATTTGAAATTAGTAGTATTCAGTTGGGAGCCCACTCCAAGAAAAAATCGAGTGTGTTGTCATGGAACTGTTGTTCTCCCCACCTTGTTCAGAGTGACAAGGACACATCAATTGGCTGTCAAACTTGAACCAAGAGGTCTTATTTATGTGAAAGTGACTCTTATGGAACAGTGGGAGAATTCTCTTCTCAGACTAGATAAAAATCGAGCTTCAGTAATGTTTGGTGTTGACATTCAAAAAGTTGTAGAAAGAGAAAATGTAGGATTGATGGTGCCACTCCTGATACAGAAATGTATTGTGGAAATTGAAAACAGAGGTTGTCAGGTAGTAGGCCTGTATCGATTATGTGGTTCAGCAGCAGTCAAGAAAGAACTTCGAGAGGCTTTTGAGAGGGATAGCAAAGCTGTTGGTCTTTGTGAAAACCAGTATCCAGATATAAATGTAGTAACAGGTGTTCTTAAGGATTACTTAAGAGAGCTTCCATCTCCTCTGATAACAAAGCAGCTTTATGAGGCTGTACTAGATGCAATGGTAAAAAGTCCTTTGAAAATGTCATCAAATGGTTGTGAGAATGATCCATGTGATTCTAAGTACACTGTTGATCTGTTGAATTGTCTGCCAGATGTTGAGAAGGCAACCCTAAAGATGTTGTTGGATCATTTGAAATTAGTGGCTTCTTACCATGAAGTGAATAAGATGACCTGTCAGAATTTGGCTGTGTGCTTTGGACCAGTGTTACTAAGCCAGAGACAAGAGACTTCTACCCATAACAACAGAGTCTTTACTGATTCAGAGGAACTTGCAAGTGCTTTGGATTTTAAAAAACATATTGAAGTTCTTCACTACTTACTCCAGCTCTGGCCAGTGCAACATTTAACTATCAGAGAATCAGCAAACAGTTTGTTCCCAGAGCAGTCATCTTCTCTGAACTATTTGAGGCGGAAAAAAGAACGACCTTACATGTTAAATTTGAGTAGTACCGATTCATCAGGAGTACTTAGGCCAAGGCAAACCAGATTAGACAGCCCACTTAGCAATCGTTATGCAGGAGACTGGAGTGGCTGTGGAGAAAACTACTTTTTAAATAAAAAAGAAAATTTAAATGATGTGGATTATGATGATGTACCTTCAGAAGACAGAGAAAACAGAGAAGATTATAGCAAAATGGATGGACCAGAAATAATGATCGAACAGCCAATTTCCACATCCAGAGAGTGCACATTTCAGTCATATTTGACAGTGCAGACAATTGAGTCTACAGTGGATCAAAAAGTTAATCTCAAAGATCTACAAGAAAGTATTGATACTTTGATTGGCAATCTGGAACGTGAGCTCAACAAAAACAAGCTTAACATGAGTATTTGA

Related Sequences

XP_004841410.1 Protein

Syde2 PREDICTED: rho GTPase-activating protein SYDE2 [Heterocephalus glaber]

Length: 1195 aa      View alignments
>XP_004841410.1
MHDLPPDSGSRRGGGGSADRGGTSEARVAGLPPFPRGAANSPVCRRDLELGGGDRSGQQVSPPWSPPRESGYGRLRCPRMPLSRSRSLESLQVGAKLPPLQRWPSDSWIRWGAREDREEPPPRGGGMDGWSWGGSARATEPAGLLRPCTHGPGCSSRSPFRDPAQSSVIFSGKDSCQEEPPFLRPPAVTVKKLQKWMYKGRLLSLGMKGRTRGPASKVPGARAASANPSTLKVHGNPDLSVPPDERITLTELFEDVYGSSMKKRELEDLKDNVEFRGHKPLNNITVSKKRNWLYQSSLRALNLEEENKKYQNRSNLSISSVTPSYHQLSQPFLKSSEEYCTYMVCNATSSSLSRNCSLDFNEDNDADDEGEIWYNPIPEDDDLGMSSALSFGVANTAVLKLPVSSLHIPSGSDLMKAAQYTEDLLCSSEHMGDIQSMELNEMNPINSIHSTEFIPQHKQRLGHKTQEGIMVEDSPVLKPPFAGPGILAAANRTELGVIEPSSPSPTPIKKGSSINWSLPDKIKSPRTVRKLSMKMKKLPEFSRKLSVKGTLNYIHSPDSTPSLSKYNCREVHHAVILPSGNTTTAAKRNVISRYHLDTTVSSQHSYQKKTLNSKYSCQGGYLSDGDSPELITKSSKHGPENKFGKGKEIIPSSCNKNEIDIDAFRHYSFSDQPKCSQYISGLMSVHFYGAEDLKPPRIDSKDVFCAIQVDSVNKARTALLTCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNRVCCHGTVVLPTLFRVTRTHQLAVKLEPRGLIYVKVTLMEQWENSLLRLDKNRASVMFGVDIQKVVERENVGLMVPLLIQKCIVEIENRGCQVVGLYRLCGSAAVKKELREAFERDSKAVGLCENQYPDINVVTGVLKDYLRELPSPLITKQLYEAVLDAMVKSPLKMSSNGCENDPCDSKYTVDLLNCLPDVEKATLKMLLDHLKLVASYHEVNKMTCQNLAVCFGPVLLSQRQETSTHNNRVFTDSEELASALDFKKHIEVLHYLLQLWPVQHLTIRESANSLFPEQSSSLNYLRRKKERPYMLNLSSTDSSGVLRPRQTRLDSPLSNRYAGDWSGCGENYFLNKKENLNDVDYDDVPSEDRENREDYSKMDGPEIMIEQPISTSRECTFQSYLTVQTIESTVDQKVNLKDLQESIDTLIGNLERELNKNKLNMSI