Sequence details NCBI ID: XM_004841302.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc8d
Gene Name leucine rich repeat containing 8 family, member D, transcript variant X3
Entrez Gene ID 101725484

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC8D ENSCPOG00000008295 (Guinea pig)

Gene Details

leucine rich repeat containing 8 family, member D

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007458, Guinea pig)

Protein Percentage 98.24%
CDS Percentage 95.8%
Ka/Ks Ratio 0.06133 (Ka = 0.0085, Ks = 0.1386)

LRRC8D ENSG00000171492 (Human)

Gene Details

leucine rich repeat containing 8 family, member D

External Links

Gene Match (Ensembl Protein ID: ENSP00000338887, Human)

Protein Percentage 97.09%
CDS Percentage 94.44%
Ka/Ks Ratio 0.0807 (Ka = 0.0147, Ks = 0.1818)

Lrrc8d ENSMUSG00000046079 (Mouse)

Gene Details

leucine rich repeat containing 8D

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113603, Mouse)

Protein Percentage 95.8%
CDS Percentage 86.44%
Ka/Ks Ratio 0.02912 (Ka = 0.0212, Ks = 0.728)

Lrrc8d ENSRNOG00000002121 (Rat)

Gene Details

leucine rich repeat containing 8 family, member D (Lrrc8d), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002888, Rat)

Protein Percentage 95.92%
CDS Percentage 86.52%
Ka/Ks Ratio 0.02863 (Ka = 0.0207, Ks = 0.7224)

Genome Location

Sequence Coding sequence

Length: 2577 bp    Location: 7922660..7822880   Strand: -
Raw sequence   
>XM_004841302.1
ATGTTTACCCTCGCAGAAGTTGCTTCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAACCATGGTGGGATGTGTTTATGGATTACCTGGCTGTTGTTATGTTGATGGTAGCCATCTTTGCAGGAACTATGCAACTTACCAAAGATCAGGTGGTCTGCTTGCCAGTGTTGCCATCTCCTGTAAGTTCAAAGACACACACGCCACCAGGAAATACAGATGTCACCACCGAAGTCCCGAAGATGGAAGCAGCCACTAACCAAGACCAAGATAGGCGGATAGCAAATGACATTTCCTTTGGTACATCTGCTGTGACATCTGACATACCTCTCAGAGCCACATATCCTCACCCAGATTCCACAGTTCCCAATCAGGAGGCAAGGAAAGAGAAGAAAGATCCAACAGGCCGAAAAACAAACTTGGATTTTCAGCAATATGTATTTATTAATCAAATGTGTTACCATCTGGCCCTTCCATGGTATTCTAAATACTTTCCATACCTTGCTCTTATCCATACTATTATTCTCATGGTCAGTAGCAACTTTTGGTTCAAATATCCCAAAACATGCTCAAAAGTAGAACATTTTGTTTCAATATTAGGAAAGTGCTTTGAATCTCCTTGGACTACTAAAGCATTGTCTGAGACAGCATGTGAAGACTCAGAGGAAAACAAACAGAGAATAACAGGTGCCCAGACTCTACCAAAGCATGTGTCTACCAGCAGTGATGAGGGGAGTCCCAGTGCCAGTACCCCAATGATCAACAAAACTGGCTTCAAGTTCTCAGCTGAAAAGCCTGTGATCGAAGTCCCCAGCATGACCATCCTGGACAAAAAAGATGGGGAACAGGCTAAAGCCCTGTTTGAGAAAGTCAGGAAGTTCCGTGCCCATGTGGAAGACAGTGACTTGATCTATAAACTCTATGTGGTCCAAACAGTTATCAAAACAGCCAAGTTCATTTTCATTCTCTGCTACACTGCAAACTTTGTCAACGCAATCAGCTTTGAGCACGTCTGCAAGCCCAAAGTTGAGCACCTGACTGGCTATGAGGTATTTGAGTGTACCCACAACATGGCGTACATGTTGAAAAAGCTTCTCATCAGTTATATTTCCATTATTTGTGTTTATGGTTTTATTTGCCTCTATACTCTGTTCTGGTTATTCAGAATACCTTTGAAAGAATATTCTTTTGAAAAAGTCAGAGAAGAGAGCAGTTTCAGTGACATTCCAGATGTCAAAAATGATTTTGCTTTCCTTCTACACATGGTAGACCAGTATGACCAGCTATATTCCAAGCGTTTTGGTGTGTTCTTGTCAGAAGTCAGTGAAAACAAACTTAGGGAAATTAGTCTGAACCACGAGTGGACATTTGAAAAACTCAGGCAGCACGTGTCACGCAATGCCCAGGACAAGCAGGAGTTGCACCTGTTCATGTTGTCAGGAGTGCCCGATGCTGTCTTTGACCTCACGGACTTGGATGTGCTAAAACTTGAACTGATTCCAGAAGCTAAAATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAAGAGCTTCACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACTGCTTTTAGCTTTCTCCGAGATCACTTGAGATGCCTTCACGTGAAGTTCACTGACGTGGCTGAAATCCCTGCCTGGGTGTATTTGCTCAAAAACCTTCGAGAGTTGTACTTGATGGGCAATTTGAACTCAGAAAACAATAAAATGATAGGACTTGAATCCCTCCGAGAGTTGCGACACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACATTACAGATGTGGCTCCACATCTTACAAAGTTAGTCATTCATAATGACGGCACTAAACTCTTGGTACTGAACAGCCTTAAGAAAATGATGAATGTCGCTGAGCTGGAACTCCAGAATTGTGAACTAGAGAGAATCCCACATGCTATTTTCAGCCTGTCTAATTTACAAGAACTGGATTTAAAGTCGAATAACATACGCACAATTGAGGAGATCATCAGTTTCCAGCATTTAAAACGACTGACTTGTTTAAAATTATGGCATAATAAAATTGTTACCATTCCTCCCTCCATTACCCATGTCAAAAACTTGGAGTCACTTTATTTCTCCAACAACAAGCTCGAATCTTTACCAGTGGCAGTATTTAGTTTACAGAAACTCAGATGCTTAGATGTAAGCTACAACAACATTTCAGTGATTCCAACAGAAATAGGATTGCTTCAGAACATGCAGCATTTGCATATCACTGGGAACAAAGTGGACATTCTGCCAAAACAATTGTTTAAATGCATGAAGTTGAGGACTTTGAATCTGGGGCAAAACTGCATCACCTCCCTCCCAGAAAAAATTGGTCAGCTCTCCCAGCTCACTCAGCTGGAGCTGAAGGGAAACTGCTTGGACCGGTTGCCAGCCCAGCTGGGCCAGTGTCGAATGCTCAAGAAAAGCGGGCTTGTTGTGGAAGATCACCTTTTTGACACCCTGCCACTAGAAGTCAAAGAAGCATTGAATCAAGACATAAATGTTCCCTTTGCAAATGGGATTTAA

Related Sequences

XP_004841359.1 Protein

Lrrc8d PREDICTED: leucine-rich repeat-containing protein 8D isoform X3 [Heterocephalus glaber]

Length: 858 aa      View alignments
>XP_004841359.1
MFTLAEVASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVVCLPVLPSPVSSKTHTPPGNTDVTTEVPKMEAATNQDQDRRIANDISFGTSAVTSDIPLRATYPHPDSTVPNQEARKEKKDPTGRKTNLDFQQYVFINQMCYHLALPWYSKYFPYLALIHTIILMVSSNFWFKYPKTCSKVEHFVSILGKCFESPWTTKALSETACEDSEENKQRITGAQTLPKHVSTSSDEGSPSASTPMINKTGFKFSAEKPVIEVPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDLIYKLYVVQTVIKTAKFIFILCYTANFVNAISFEHVCKPKVEHLTGYEVFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFRIPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHVSRNAQDKQELHLFMLSGVPDAVFDLTDLDVLKLELIPEAKIPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLRCLHVKFTDVAEIPAWVYLLKNLRELYLMGNLNSENNKMIGLESLRELRHLKILHVKSNLTKVPSNITDVAPHLTKLVIHNDGTKLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNLQELDLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVTIPPSITHVKNLESLYFSNNKLESLPVAVFSLQKLRCLDVSYNNISVIPTEIGLLQNMQHLHITGNKVDILPKQLFKCMKLRTLNLGQNCITSLPEKIGQLSQLTQLELKGNCLDRLPAQLGQCRMLKKSGLVVEDHLFDTLPLEVKEALNQDINVPFANGI