Details from NCBI annotation

Gene Symbol Tmed5
Gene Name transmembrane emp24 protein transport domain containing 5, transcript variant X1
Entrez Gene ID 101708849

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMED5 ENSCPOG00000012192 (Guinea pig)

Gene Details

transmembrane emp24 protein transport domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010965, Guinea pig)

Protein Percentage 91.59%
CDS Percentage 92.33%
Ka/Ks Ratio 0.25641 (Ka = 0.0496, Ks = 0.1935)

TMED5 ENSG00000117500 (Human)

Gene Details

transmembrane emp24 protein transport domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000359305, Human)

Protein Percentage 94.76%
CDS Percentage 93.16%
Ka/Ks Ratio 0.14201 (Ka = 0.0294, Ks = 0.2071)

Tmed5 ENSMUSG00000063406 (Mouse)

Gene Details

transmembrane emp24 protein transport domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002837, Mouse)

Protein Percentage 87.34%
CDS Percentage 87.05%
Ka/Ks Ratio 0.20228 (Ka = 0.0763, Ks = 0.3772)

Tmed5 ENSRNOG00000000073 (Rat)

Gene Details

transmembrane emp24 protein transport domain containing 5 (Tmed5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000083, Rat)

Protein Percentage 88.21%
CDS Percentage 86.03%
Ka/Ks Ratio 0.14711 (Ka = 0.0706, Ks = 0.4798)

Genome Location

Sequence Coding sequence

Length: 690 bp    Location: 4508777..4535596   Strand: +
>XM_004841249.1
ATGGGCGACAAAATCTGGCTGCCCTTTTGTTTGTTCCTCCTGGTCGCTTTACCCCTAAGGCTGCTGCCGGGGGTGGCCGGCTTCACGCCTTCCTTAGACAGCGACTTTACATTTACCCTTCCGGCCGGACAGAAGGAGTGTTTCTACCAGTCCATGCCGCTGAAGGCCTCGCTGGAGATCGAGTACCAAGTTTTAGATGGAGCAGGATTAGATATTGATTTCCATCTTGCCTCTCCAGAAGGCAAAACTTTAGTTTTTGAACAAAGAAAATCAGATGGAGTTCACACTGTAGAAACTGAAGTTGGTGATTACATGTTCTGCTTTGACAATACATTCAGCACCATTTCTGAGAAAGTAATTTTCTTTGAATTAATCCTGGATAATATGGGAGAACAGGCACAAGAACAAGAAGACTGGAAGAAATATATTACCGGTACAGATATGTTGGAGATGAAACTGGAAGACATCCTGGAATCCATCAACAGCATCAAGTCCAGAGTAAGCAAAAGTGTTCATATACAAACTCTACTTAGAGCATTTGAAGCTCGTGATCGAAACATACAAGAAAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGTTAATTTAGTTGTCATGGTGGTGGTATCAGCCATTCAAGTTTATATGCTGAAGAGTCTATTTGAAGATAAAAGGAAAAGTAGAACTTAA

Related Sequences

XP_004841306.1 Protein

Tmed5 PREDICTED: transmembrane emp24 domain-containing protein 5 isoform X1 [Heterocephalus glaber]

Length: 229 aa      View alignments
>XP_004841306.1
MGDKIWLPFCLFLLVALPLRLLPGVAGFTPSLDSDFTFTLPAGQKECFYQSMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDMLEMKLEDILESINSIKSRVSKSVHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT