Details from NCBI annotation

Gene Symbol Ptbp2
Gene Name polypyrimidine tract binding protein 2, transcript variant X2
Entrez Gene ID 101726224

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTBP2 ENSCPOG00000003762 (Guinea pig)

Gene Details

polypyrimidine tract binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003399, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 97.16%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1351)

PTBP2 ENSG00000117569 (Human)

Gene Details

polypyrimidine tract binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000412788, Human)

Protein Percentage 99.81%
CDS Percentage 96.99%
Ka/Ks Ratio 0.00592 (Ka = 0.0008, Ks = 0.1406)

Ptbp2 ENSMUSG00000028134 (Mouse)

Gene Details

polypyrimidine tract binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029780, Mouse)

Protein Percentage 99.81%
CDS Percentage 94.29%
Ka/Ks Ratio 0.0031 (Ka = 0.0009, Ks = 0.2748)

Ptbp2 ENSRNOG00000010827 (Rat)

Gene Details

polypyrimidine tract binding protein 2 (Ptbp2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015036, Rat)

Protein Percentage 99.81%
CDS Percentage 94.04%
Ka/Ks Ratio 0.00298 (Ka = 0.0009, Ks = 0.2877)

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location: 856017..783612   Strand: -
>XM_004841217.1
ATGGACGGAATTGTCACTGAGGTTGCTGTTGGTGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCAGTAGTCCAAACTCTAATATGAGCGGCATGGTAGTTACAGCCAATGGTAATGACAGCAAGAAATTTAAAGGAGAAGATAAAATGGACGGTGCTCCTTCTCGTGTACTTCACATTCGAAAATTACCTGGTGAAGTGACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAGGAAAAAACCAGGCATTTTTGGAACTAGCAACAGAGGAAGCCGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAACCAATTTATATCCAGTACTCTAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAAGCAGTTCTTCAAGCTGTGACTGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCACAGTTAGTGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTACTACCCTGTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCTTGCTGTACTCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAGAGTAGGGATTATACTCGACCTGATCTCCCATCTGGAGATGGACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGAGACATCCCTTTTAGCTGTTCCAGGAGCTCTCAGTCCTTTGGCTATTCCAAATGCTGCTGCAGCCGCTGCTGCAGCCGCTGCTGGCCGAGTGGGTATGCCCGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTTCGGTGTTTATGGAGATGTGCAGCGCGTGAAGATTTTGTACAATAAGAAAGACAGTGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTCTCTAAACATCAGACTGTACAACTACCTCGAGAGGGGCTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAGCCTGGATCCAAAAATTTTCAGAACATTTTTCCTCCTTCTGCCACCCTCCACCTATCTAATATCCCTCCTTCAGTAGCAGAAGAGGATCTCCGAACACTGTTTGCTAACACTGGGGGCACTGTGAAAGCATTTAAATTTTTTCAAGATCACAAAATGGCTCTTCTTCAAATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTGCATAATTATAACCTTGGTGAAAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAATTTAA

Related Sequences

XP_004841274.1 Protein

Ptbp2 PREDICTED: polypyrimidine tract-binding protein 2 isoform X2 [Heterocephalus glaber]

Length: 531 aa      View alignments
>XP_004841274.1
MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSGMVVTANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI