Sequence details NCBI ID: XM_004840550.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hip1
Gene Name huntingtin interacting protein 1
Entrez Gene ID 101716682

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HIP1 ENSCPOG00000006880 (Guinea pig)

Gene Details

huntingtin interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006204, Guinea pig)

Protein Percentage 94.54%
CDS Percentage 92.45%
Ka/Ks Ratio 0.10706 (Ka = 0.0291, Ks = 0.2717)

HIP1 ENSG00000127946 (Human)

Gene Details

huntingtin interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000336747, Human)

Protein Percentage 91.3%
CDS Percentage 87.85%
Ka/Ks Ratio 0.08572 (Ka = 0.0461, Ks = 0.5375)

Hip1 ENSMUSG00000039959 (Mouse)

Gene Details

huntingtin interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000059033, Mouse)

Protein Percentage 88.34%
CDS Percentage 84.98%
Ka/Ks Ratio 0.08408 (Ka = 0.0625, Ks = 0.743)

Hip1 ENSRNOG00000001448 (Rat)

Gene Details

huntingtin interacting protein 1 (Hip1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031153, Rat)

Protein Percentage 88.24%
CDS Percentage 85.11%
Ka/Ks Ratio 0.08619 (Ka = 0.0622, Ks = 0.7218)

Genome Location

Sequence Coding sequence

Length: 3039 bp    Location: 14607183..14460742   Strand: -
Raw sequence   
>XM_004840550.1
ATGGACCGGATGGCCAGCTCTATGAAGCAGGTGCCTAACCCGCTACCCAAGGTACTGAGTAGGCGCGGGGTCGGCGCGGGACCGGAGGCTGCGGAGCGGGAGAGCTTCGAGCGGACTCAGACTGTCAGCATCAATAAGGCCATTAATACGCAGGAAGTGGCCGTAAAGGAAAAACACGCCAGAACGTGCATCCTGGGTACCCACCATGAGAAAGGGGCTCAAACCTTCTGGTCTGTTGTCAACCGGCTGCCCCTCTCCAGCAACGCCATGCTCTGCTGGAAGTTCTGCCATGTGTTCCACAAGCTCCTCCGAGACGGACACCCAAACGTTCTGAAGGACTCCCTGAGATACAAAAATGAACTGAGTGACATGAGCAGGATGTGGGGCCACCTGAGCGAGGGCTACGGGCAGCTCTGCAGTATCTACCTCAAACTGCTGAGGACGAAGATGGAGTACCACACCAAAAATCCCAGGTTCCCAGGCAACCTTCAGATGAGTGACCGACAGCTGGACGAGGCTGGAGAAAGTGACGTTAACAACTTTTTCCAGCTAACAGTGGAGATGTTTGATTACCTGGAGTGTGAACTGAACCTCTTCCAAACTGTGTTCAACTCCTTGGACATGTCCCGCTCCGTGTCAGTGACCACAGCCGGGCAGTGCCGCCTCGCCCCACTGATCCAGGTCATCCTGGACTGCAGCCATCTCTATGACTACACTGTCAAGCTTCTCTTCAAACTCCACTCCTGTCTCCCAGCCGACACCCTGCAAGGCCACCGGGACCGCTTCATGGAGCAGTTCACGAAGCTGAAGGATCTGTTCCACCGCTCTAGCAACCTCCAGTACTTCAAGCGACTCATTCAGATCCCCCAGCTGCCTGAGAACCCACCCAACTTCCTACGAGCCTCAGCCCTGTCAGAACACATCAGCCCTGTGGTGGTCATCCCGGCTGAGGCCTCGTCCCCTGACAGCGAGCCAGTCTTGGAGAAGGATGACCTCATGGACATGGACGCCTCCCAGCAGAATTTATTTGATAACAAGTTTGATGACATCTTTGGCAGCTCATTCAGCAGTGATCCCTTCAATTTCAACAGTCAAAATGGTGTGAACAAGGATGAAAAGGACCACCTGATCGAGCGACTGAACAGAGAGATCAGCAGGCTGAGAGCCCAGCTAGAGAGCATGAAGACTGAGGTGTGTGCTGGGCTCTCACCTGCTTTCGTGCTTGCAACCGATGACTGCGAGTTCCTCCGGGCAGAGCTGGACGAGCTCAAGAAGCAGCGGGAAGACACAGAGAAGGCACAGCGGAGCCTGACAGAGATAGAGAGGAAGGCCCAGGCCAATGAGCAGCGGTATAGCAAGCTCAAGGAGAAGTACAGCGAGCTGGTTCAGAACCATGCTGACCTGCTGCGGAAGAATGCAGAGGTGACCAAACAGGTCTCCATGGCCAGGCAAGCACAGGCAGATTTGGAACGAGAGAAAAAAGAGCTTGAAGATTCCTTTGAGCGTACCCAGGAACAGCAGGAAGTTCTAGAGAGCTTGAAACAAGAGCTCGCCACCAGTAGGCAGGAGCTGCAGCTCCTCCACAGCAACCTGGAGACCTCTGCCAAGTCAGAAGCGAAATGCACAGTGCAGATCACCGAGCTAGAGAAGGAGCGGGACAGCTTGGCGAGTGCCGCGGCAGGTCAGGAGAAGGAATTGGCAGCCCTTCGAGAGCAGCTGCAGTGCTCCCAGCTCAAACTGGCCAGCACACAGGAGTCTATGTGCCAGCTTGCCAAAGACCAGCGGAAGGCGCTGCTGCTGCGGTCCAGGAAGGCTGTGGAGCACATGGTGCAGGAGGCGCTGAGCCAGCTTGAGGAGCCTGTGCTCATCAGCTGCGCGGGGTCCACAGATCACCTTCTCTCCAAGGTCAAATCTGTTTCCAGCTGCATCGAGCACCTGGAGAAGAGTCGGAGCCAGTACCTGGCCTGCCCAGAAGATATAGGTGACCTCCTGCACTCTGTCACCCTGCTCGGCCACCTGACCAGCGACATCATTGTTCACGGGAACAGCACCAGCCTCAGGGCCCCACCGGAGCCCGCGGACTCACTGACAGAGGCTTGTAAGGAGTACGGCAAGGAAACCCTCGCCTACCTGGCCTCGCTGGAGGAAGAGGCCACCCTCGAGAATGCCGACAGCATGGCCATGAGGAGCTGCCTGAGCAAGATCAAGGCCATTGGCGAGGAGCTGCTGCCTAGAGGCCTGGACATCAAGCAGGAGGAGCTGGGAGACCTCGTGGACAAGGAGATGGCCACCACTTCAGCTGCCATTGAAGCTGCCACAGCCCGGATCGAGGAAATGCTCAGCAAATCCAGAGCAGGAGACACAGGAGTCAAGTTGGAGGTGAACGAAAGGATCCTCGGTTCCTGTACCAGCCTAATGCAAGCCATCCAGGTCCTGATTGTGGCCTCAAAAGATCTCCAAAGGGAGATCGTGGAGAGCGGCAGGGGTACCGCATCCCCTAAGGAATTTTATGCCAAGAACTCTCGGTGGACAGAAGGACTCATCTCAGCCTCCAAAGCTGTGGGCTGGGGAGCCACCATCATGGTGGATGCTGCTGACCTAGTGGTCCAAGGCAGAGGGAAATTTGAGGAGCTGCTGGTGTGTTCCCATGAAATCGCTGCTAGCACAGCCCAGCTTGTGGCTGCATCCAAGGTAAAAGCTGATAAGGACAGCCCCAACCTTGCCCGGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCTACAGCAGGGGTGGTGGCCTCAACTATTTCTGGCAAATCACAGATTGAGGAGACAGACAATATGGACTTCTCAAGCATGACACTGACCCAGATCAAGCGCCAGGAGATGGATTCCCAGGTCAGGGTGCTGGAGTTGGAAAATGAGCTGCAGAAGGAGCGTCAGAAACTAGGAGAGCTTCGGAAAAAGCACTATGAGCTCGCTGGCGTGGCCGAGGGCTGGGAAGAAGGAACAGAAGCATCTCCACCTACGCTGCAAGAAGCAGTACTTGAAAAAGAATAG

Related Sequences

XP_004840607.1 Protein

Hip1 PREDICTED: huntingtin-interacting protein 1 [Heterocephalus glaber]

Length: 1012 aa      View alignments
>XP_004840607.1
MDRMASSMKQVPNPLPKVLSRRGVGAGPEAAERESFERTQTVSINKAINTQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSSNAMLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMFDYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFMEQFTKLKDLFHRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPVLEKDDLMDMDASQQNLFDNKFDDIFGSSFSSDPFNFNSQNGVNKDEKDHLIERLNREISRLRAQLESMKTEVCAGLSPAFVLATDDCEFLRAELDELKKQREDTEKAQRSLTEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQVSMARQAQADLEREKKELEDSFERTQEQQEVLESLKQELATSRQELQLLHSNLETSAKSEAKCTVQITELEKERDSLASAAAGQEKELAALREQLQCSQLKLASTQESMCQLAKDQRKALLLRSRKAVEHMVQEALSQLEEPVLISCAGSTDHLLSKVKSVSSCIEHLEKSRSQYLACPEDIGDLLHSVTLLGHLTSDIIVHGNSTSLRAPPEPADSLTEACKEYGKETLAYLASLEEEATLENADSMAMRSCLSKIKAIGEELLPRGLDIKQEELGDLVDKEMATTSAAIEAATARIEEMLSKSRAGDTGVKLEVNERILGSCTSLMQAIQVLIVASKDLQREIVESGRGTASPKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGRGKFEELLVCSHEIAASTAQLVAASKVKADKDSPNLARLQQASRGVNQATAGVVASTISGKSQIEETDNMDFSSMTLTQIKRQEMDSQVRVLELENELQKERQKLGELRKKHYELAGVAEGWEEGTEASPPTLQEAVLEKE