Details from NCBI annotation

Gene Symbol Zkscan5
Gene Name zinc finger with KRAB and SCAN domains 5, transcript variant X4
Entrez Gene ID 101701573

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZKSCAN5 ENSCPOG00000004422 (Guinea pig)

Gene Details

zinc finger with KRAB and SCAN domains 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003990, Guinea pig)

Protein Percentage 54.26%
CDS Percentage 63.6%
Ka/Ks Ratio 0.45475 (Ka = 0.4557, Ks = 1.002)

ZKSCAN5 ENSG00000196652 (Human)

Gene Details

zinc finger with KRAB and SCAN domains 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000377725, Human)

Protein Percentage 84.84%
CDS Percentage 86.22%
Ka/Ks Ratio 0.18135 (Ka = 0.0805, Ks = 0.444)

Zkscan5 ENSMUSG00000055991 (Mouse)

Gene Details

zinc finger with KRAB and SCAN domains 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000082814, Mouse)

Protein Percentage 79.59%
CDS Percentage 78.72%
Ka/Ks Ratio 0.11576 (Ka = 0.1206, Ks = 1.0418)

Zkscan5 ENSRNOG00000000982 (Rat)

Gene Details

zinc finger with KRAB and SCAN domains 5 (Zkscan5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001300, Rat)

Protein Percentage 77.58%
CDS Percentage 78.17%
Ka/Ks Ratio 0.14705 (Ka = 0.1391, Ks = 0.9462)

Genome Location

Sequence Coding sequence

Length: 2112 bp    Location: 32944899..32970740   Strand: +
>XM_004840524.1
ATGATAATGACAGACTCCCGGGAAGTTACAGACTTGGACCCTCCAGTTGAGCCTTCGCAAGAGCAGGAAGATCTTCTAATAGTGAAGGTGGAAGAAGAAGACTGTACTTGGATGCAGGAGTACAATCCGCCAACGTTTGAGACTTTTTATCAGCGCTTCAAGCATTTCCAGTACCATGAGGCATCAGGACCCCGGGAGGCCCTGAGCCAGCTCCGGGTGCTCTGCTGTGAGTGGCTGAGGCCTGAGCTGCACACCAAGGAGCAGATCCTGGAGCTTCTGGTGCTGCAACAGTTCCTGAGCATCCTGCCTGAAGAGTTCCGGGCCTGGGTGAGAGAACACCACCCTGAAAGCGGAGAAGAGGCTGTGGCTGTGATAGAAAATATGCAGAGAGAACTTGAGGAACCAAGACAACAGATTGTGGCGTGTCCTGAAGTGCTTCCTCAGAAGATGGTGTCACCTGGAGCAGTGCAGGAGACCTTTGGTCACCAGTTCCTGTCCATGGATGCCCAGCCTGAACAAGAGCCACGGAAACCTCATGTTCTGGAGGAAAATGATTATGAGTCCAAGGACAACAATATGGAGCTCACAGCAAAGCAGATTTCTAATGAAGCCAGTTCACCCAACTCACATTGGGTGGCAGTAGGAAGCACTGAAAGAAATATTTCCCAGAGTCAAGAGTTTGCAGAAGTTAGTGACTTTAAGGGCATGGTACAAAGGTGGCAGGTAAATCCCACCATGGGGAAACTGAAGCAGAATCCTTCCCAGAAGAGAGATCTTAGCACTAGCAAAGATACTAACCGTAAGCAGAGCACAAATGGTGAGAGAGGGCACAGATGTAACGACTGTGGGAAATTTTTTCTTCAAGCCTCCAACTTTATTCAGCATCGGCGAATCCACACTGGAGAGAAACCATTTCAGTGTGGTGAATGTGGGAAGAGCTATAATCAGCGTGTGCACCTCACTCAGCACCAGAGAGTCCACACCGGCAGTGACAGAAGAAGTAGGAATACAAAACTGAATGTTAAGAACAAAATTTCAGAATTTTCAGAAGCAGACATGGAAGTACCAGAAAAAATCCAAAGGAATGCATCTGAAGTTCAAGGTTTTCAAGAAGGCTATGAACACCAAGGCAAGGCTGACAGAAAGCAGGGACTTCCTATGAAGGAGATACTAGGACAGCCCTCTTCAAAGAGGATTAATTGCAGTGAAGTCACTTACATCCACAAAAAACCCTCCACAGGAGAGAGACCACATAAATGCAATGAATGTGGAAAGAGTTTTATTCAGAGTGCACATCTTGTTCAACATCAACGAATTCACACTGGGGAGAAGCCATTTCGGTGTGATGAGTGTGGGAAAAGCTACAACCAACGTGTGCACCTCACTCAGCATCAGCGAGTTCACACAGGTGAGAAGCCCTACACCTGTCATTTATGTGGGAAAGCATTTCGAGTGAGGTCCCATCTCGTTCAGCACCAGAGTGTGCACAGTGGGGAGAGGCCTTTTAAGTGTAATGAATGTGGGAAAGGCTTTGGAAGGCGTTCACACCTTGCTGGACATCTGCGACTCCACTCCCGTGAGAAGTCCCATCAATGTCATGAATGTGGAGAAATCTTCTTTCAGTATGTCAGCCTAATCGAGCATCAGGTGCTCCATGTGGGTCAGAAAAATGAGAAAAATGGCATTTGTGAAGAAGCATACAGTTGGAACTTGACTGTGATTGAAGACAAAAAGATTGAGTTACAAGAGCAGCCTTATAAATGTGACATATGTGGAAGAGCCTTTAATTACAGTTCAGACCTTATTCAACATTATAGAACTCACACTGCAGAGAAAACCCATAAATGTGATATATGTAGAGGAAATATTGGCCAGTGTTCCCACATAAAACAACATCAAAAAATCTGTCCCAGTGCAAAGCCCCATCAGTGTAATGAATGTGGAAGAGGCTTCACTCTGAAGTCACATCTTAGTCAGCATCAGAGAATCCACACTGGTGAGAAACCTTTTCAGTGTAAAGAATGTGGAATGAGTTTCAGCTGGAGTTGTAGCCTCTTTAAGCATCTGAGAAGCCATGAGAGGACAGATACCATAAACACCTTATGTGCATAG

Related Sequences

XP_004840581.1 Protein

Zkscan5 PREDICTED: zinc finger protein with KRAB and SCAN domains 5 isoform X4 [Heterocephalus glaber]

Length: 703 aa      View alignments
>XP_004840581.1
MIMTDSREVTDLDPPVEPSQEQEDLLIVKVEEEDCTWMQEYNPPTFETFYQRFKHFQYHEASGPREALSQLRVLCCEWLRPELHTKEQILELLVLQQFLSILPEEFRAWVREHHPESGEEAVAVIENMQRELEEPRQQIVACPEVLPQKMVSPGAVQETFGHQFLSMDAQPEQEPRKPHVLEENDYESKDNNMELTAKQISNEASSPNSHWVAVGSTERNISQSQEFAEVSDFKGMVQRWQVNPTMGKLKQNPSQKRDLSTSKDTNRKQSTNGERGHRCNDCGKFFLQASNFIQHRRIHTGEKPFQCGECGKSYNQRVHLTQHQRVHTGSDRRSRNTKLNVKNKISEFSEADMEVPEKIQRNASEVQGFQEGYEHQGKADRKQGLPMKEILGQPSSKRINCSEVTYIHKKPSTGERPHKCNECGKSFIQSAHLVQHQRIHTGEKPFRCDECGKSYNQRVHLTQHQRVHTGEKPYTCHLCGKAFRVRSHLVQHQSVHSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSHQCHECGEIFFQYVSLIEHQVLHVGQKNEKNGICEEAYSWNLTVIEDKKIELQEQPYKCDICGRAFNYSSDLIQHYRTHTAEKTHKCDICRGNIGQCSHIKQHQKICPSAKPHQCNECGRGFTLKSHLSQHQRIHTGEKPFQCKECGMSFSWSCSLFKHLRSHERTDTINTLCA