Sequence detailsNCBI ID: XM_004840502.1 (Coding sequence)  Best Hit

Details from NCBI annotation

Gene Symbol Arpc1b
Gene Name actin related protein 2/3 complex, subunit 1B, 41kDa, transcript variant X5
Entrez Gene ID 101725609

Database interlinks

Part of NW_004624740.1 (SequenceType object (1))

For more information consult the page for NW_004624740.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARPC1BENSCPOG00000020413 (Guinea pig)

Gene Details

actin related protein 2/3 complex, subunit 1B, 41kDa

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000020976, Guinea pig)

Protein Percentage 97.04%
CDS Percentage 92.29%
Ka/Ks Ratio 0.02842 (Ka = 0.0137, Ks = 0.4813)

ARPC1BENSG00000130429 (Human)

Gene Details

actin related protein 2/3 complex, subunit 1B, 41kDa

External Links

Gene Match(Ensembl Protein ID:ENSP00000389631, Human)

Protein Percentage 95.97%
CDS Percentage 88.98%
Ka/Ks Ratio 0.01627 (Ka = 0.0176, Ks = 1.081)

Arpc1bENSMUSG00000029622 (Mouse)

Gene Details

actin related protein 2/3 complex, subunit 1B

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000082822, Mouse)

Protein Percentage 94.89%
CDS Percentage 88.35%
Ka/Ks Ratio 0.02665 (Ka = 0.0251, Ks = 0.9406)

Arpc1bENSRNOG00000000991 (Rat)

Gene Details

actin related protein 2/3 complex, subunit 1B (Arpc1b), mRNA

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000001315, Rat)

Protein Percentage 95.43%
CDS Percentage 87.99%
Ka/Ks Ratio 0.02088 (Ka = 0.0229, Ks = 1.0989)

Genome Location

Sequence SequenceType object (2)

Length: 1119 bp    Location: 32808775..32818224   Strand: +
Raw sequence   
>XM_004840502.1
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCATGCCTGGAACAAGCACCGCACACAGATTGCCATCTGCCCCAACAACCATGAAGTGCACATCTACGAGAAGAGTGGGGTCAGCTGGAGCAAGGTGCATGAGCTCAAGGAGCACAACGGGCAGGTGACAGGCATCGACTGGGCCCCTGAGAGTAACCGCATCGTGACTTGTGGCACGGACCGAAACGCCTATGTGTGGACGCTGAAAGGCAGCACGTGGAAGCCTACACTTGTCATCCTTCGGATCAACCGTGCCGCCCGCTGTGTGCGCTGGGCTCCCAATGAGAACAAGTTTGCTGTGGGCAGCGGCTCCCGCGTCATCTCCATCTGCTATTTTGAGCAGGAGAATGACTGGTGGGTGTGTAAGCACATCAAGAAGCCCATCCGCTCCACCGTGCTCAGCCTGGACTGGCATCCCAACAACGTGCTCCTGGCCGCTGGCGCCTGCGACTTCAAGTGCAGGATCTTCTCAGCCTACATCAAGGAGGTGGAGGAGAGGCCAGCCCCCACCCCCTGGGGCTCCAAGATGCCCTTTGGGGAACTGATGTTTGAGTCCAGCAGCAGCTGCGGCTGGGTGCACGGCGTGTGTTTCTCAGCCAGCGGCAGCCGAGTGGCCTGGGTCAGCCATGACAGCACCGTGTGCCTTGCTGATGCCGAGAAGAAGATGGCCGTGGTGACCCTGGCCTCTGAGACGCTGCCGCTGCTGGCCCTCACCTTCATCACTGAGAACAGTCTGGTGGCAGCGGGCCACGACTGCTTTCCTGTGCTGTTCACCTACGATGGTGCTGCTGGGAAGCTCAGCTTCGGCGGGCGGCTGGATGTGCCCAAGCAGAACTCTCAGCGCGGCCTCACAGCCCGGGAGCGTTTCCAGAACCTCGACAAGAAGGCGAGCTCAGAGGGCGGCAAAGCTGCAGGCACCGGCCTGGACTCGCTGCACAAGAACAGTGTCAGCCAGATCTCCGTGCTCAGTGGGGGCAAGGCCAAGTGCTCGAAGTTCTGCACCACAGGCATGGACGGCGGCATGAGCATCTGGGATGTAAAGAGCCTGGAGTCAGCCTTGAAGGACCTCAAGATAAAATGA

Related Sequences

XP_004840559.1 SequenceType object (4)

Arpc1b PREDICTED: actin-related protein 2/3 complex subunit 1B isoform X5 [Heterocephalus glaber]

Length: 372 aa      View alignments
>XP_004840559.1
MAYHSFLVEPISCHAWNKHRTQIAICPNNHEVHIYEKSGVSWSKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWTLKGSTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGACDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADAEKKMAVVTLASETLPLLALTFITENSLVAAGHDCFPVLFTYDGAAGKLSFGGRLDVPKQNSQRGLTARERFQNLDKKASSEGGKAAGTGLDSLHKNSVSQISVLSGGKAKCSKFCTTGMDGGMSIWDVKSLESALKDLKIK