Sequence details NCBI ID: XM_004840457.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pms2
Gene Name PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
Entrez Gene ID 101712682

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PMS2 ENSCPOG00000000555 (Guinea pig)

Gene Details

PMS2 postmeiotic segregation increased 2 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000487, Guinea pig)

Protein Percentage 87.67%
CDS Percentage 90.58%
Ka/Ks Ratio 0.36669 (Ka = 0.0715, Ks = 0.1949)

PMS2 ENSG00000122512 (Human)

Gene Details

PMS2 postmeiotic segregation increased 2 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000265849, Human)

Protein Percentage 80.49%
CDS Percentage 84.24%
Ka/Ks Ratio 0.30172 (Ka = 0.1198, Ks = 0.397)

Pms2 ENSMUSG00000079109 (Mouse)

Gene Details

postmeiotic segregation increased 2 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000119875, Mouse)

Protein Percentage 77.51%
CDS Percentage 81.24%
Ka/Ks Ratio 0.26774 (Ka = 0.1399, Ks = 0.5224)

Pms2 ENSRNOG00000001040 (Rat)

Gene Details

postmeiotic segregation increased 2 (S. cerevisiae) (Pms2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061927, Rat)

Protein Percentage 72.46%
CDS Percentage 78.25%
Ka/Ks Ratio 0.28106 (Ka = 0.1781, Ks = 0.6337)

Genome Location

Sequence Coding sequence

Length: 2592 bp    Location: 31315259..31344868   Strand: +
Raw sequence   
>XM_004840457.1
ATGGAGCGACCTGGGGACGCTAGTACAGAACCTGCAAAAGCCATCAAAGCTATTGATGGGAAGTCAGTTCATCAGATTTGTTCTGGGCAAGTGGTACTGAGTCTCAGCACTGCTGTGAAGGAGTTGGTAGAAAATAGTGTGGATGCTGGTGCCACTAATATTGATCTAAGGCTTAAAGACTATGGGGTGGATCTCATTGAAGTTTCAGACAATGGATGTGGGGTAGAAGAAGAAAACTTTGAAGCCTTAGCTTTGAAACACCACACTTCTAAGATTCAAGAGTTTGCCGATCTCACTCTGGTTGAAACTTTTGGCTTTCGGGGGGAAGCTCTGAGCTCACTCTGTGCACTGAGTGATGTAACTATTTCTACGTGCCACATGTCTGCAAAGGTTGGGACTCGACTTGTGTTTGATCACAATGGGAAAATTGTCCAAAAAACCCCCTGTCCACGACCCAAAGGGACAACAGTCAGTGTACAGCAGTTATTTTATACACTACCTGTGCGCCATAAGGAATTTCAAAGGAATATTAAGAAGGAGTATGCCAGAATGGTCCAGGTCTTACATGCGTACTGTATCATTTCAGCAGGCATCCGTGTAAGTTGTACCAATCAGCTTGGACAAGGAAAGCGGCAGCCTGTGGTGTGCACAAGTGGCAGCACCAGCTTGAAGGAGAATATCGGCTCTGTGTTTGGGCAGAAGCAGTTGCAAAGCCTCCTTCCTTTTGTTCAGCTGCCCCCTAGTGAATCTGTCTGTGAAGAGTATGGCCTGAGCTGTTCCGACACGCTGCCTGATCTGTTTCATATCTCAGGCTTCGTCTCACGCGGCACGCATGGCGTTGGGAGGAGCGCAGCAGACAGACAGTTTTTCTTCATCAATCGGCGTCCTTGTGACCCAGCAAAGGTCTCTAGACTTGTGAATGAGGTCTACCACATGTATAATCGACATCAATATCCTTTTGTTGTTCTTAACATTTCTGTTGATTCAGAATGCGTTGATATCAATGTTACTCCAGATAAAAGGCAGATCTTACTACAAGAAGAGAAGCTTTTGTTGGCTATTTTAAAGACCTCTTTGATAGGAATGTTTGATGGTGATGTGAATAAACTTACTGTCAATCAGCAGCCACTGCTGGATAATGAAGGTAACTTAGTAAAGATGGATGCAGCAGAAATGGAAAAGCCTCAGCTGGAAAAGCAGACCAATTCCCTTTCGTTAAGGGCTCGAGGGGAAGAAAGAAGGGCCGTGTCCATTTCCAGGCTCCGAGAGGCCTTTTCTCTTAGTCACAGCACAGATACCAAGTCTTGGGGCCTGGAGACTGCAGATCGGAGATGGAATTCTCTGAGAGTGAACGGAGGTGCACCATCTTTTGATTCCCCAGATCCTGTCTCTGCCTGGGGCTTGCTGGGTCCTCAGGAAGAGGTGATAAGTCCCAAGAAGGGCTCTGGTGACTCTGTGGACAGAGCAGAAACAGAGGAGGACTTGGGGCACAGCAGCACCTCAGCTGGCTCCAAGGAAGGGTTCAGCACTCCAGAAGCCAGGAGTCAGTGTAGCAGTGACCAAGCAGCGAGCTCCCCGGAAGACAGATTTCCACAGGGAAGTGTGGACTCCTGTGAGCAACTGCTCGACACAGACCGGCACCCCTCTGGCATGAGATACCATTTAGACCAAGATATTGGATATAAATTTAGAGCTTTGCCTGTGCAGACTGATTTCTCATCCTCAGACACCAAGCGTTTTAAAAAGGAAGAAATTCCCTCAATTGCTGACATTCCTCAAAAGTTGGTTAGTACTCAGAACATGTCAGGGACTCAGGTTGATGTAGCTGTTAAAATTAGTAAGAAAATAGTGCCCCTTACCTTTTCTATGAGTACTTTAGCTAAACGAATCAATCAGTTACATCACCAAAAACAACAGAATGAAGGTGAACAGAATTACAGGAGATTTAGGGCAAAGATTTGCCCTGGAGAAAACCAAGCAGCGGAAGATGAACTAAGGAAAGAGATCAGTAAAACAATGTTTGCAGAAATGGAGATTGTAGGCCAGTTTAATTTGGGGTTCATAGTAACCAAGCTGAAGGAGGACATCTTCCTGGTGGACCAGCATGCCGCAGACGAGAAGTACAACTTCGAGATGCTGCAGCAGCACACAGCGCTCCAGGCGCAGAAGCTCATCGCACCTCAGACTCTCAACTTAACTGCCATCAATGAAGCTGTCCTGATAGAAAATTTGGAAATATTCAGAAAGAATGGGTTTGATTTTGTCATTGATGAAAGTGCTCCAGTCACTAAAAGGGCTAAATTGATTTCCTTGCCAACTAGTAAAAACTGGACCTTTGGACCCCAAGATATAGATGAACTGATCTTCATGCTAAGTGACAGCCCTGGAGTCATGTGCCGGCCCTCCCGAGTCAGACAGATGTTCGCCTCCAGAGCCTGCCGGAAGTCTGTGATGATTGGAACTGCTCTTAACACAAGCGAGATGAAGAAGCTTATTGTCCACATGGGCGAGATGGACCACCCCTGGAACTGTCCCCATGGAAGGCCAACCATGAGGCACATTGCCAATCTGGAAGTCATTTCTCAGAACTGA

Related Sequences

XP_004840514.1 Protein

Pms2 PREDICTED: mismatch repair endonuclease PMS2 [Heterocephalus glaber]

Length: 863 aa      View alignments
>XP_004840514.1
MERPGDASTEPAKAIKAIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCGVEEENFEALALKHHTSKIQEFADLTLVETFGFRGEALSSLCALSDVTISTCHMSAKVGTRLVFDHNGKIVQKTPCPRPKGTTVSVQQLFYTLPVRHKEFQRNIKKEYARMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSTSLKENIGSVFGQKQLQSLLPFVQLPPSESVCEEYGLSCSDTLPDLFHISGFVSRGTHGVGRSAADRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGMFDGDVNKLTVNQQPLLDNEGNLVKMDAAEMEKPQLEKQTNSLSLRARGEERRAVSISRLREAFSLSHSTDTKSWGLETADRRWNSLRVNGGAPSFDSPDPVSAWGLLGPQEEVISPKKGSGDSVDRAETEEDLGHSSTSAGSKEGFSTPEARSQCSSDQAASSPEDRFPQGSVDSCEQLLDTDRHPSGMRYHLDQDIGYKFRALPVQTDFSSSDTKRFKKEEIPSIADIPQKLVSTQNMSGTQVDVAVKISKKIVPLTFSMSTLAKRINQLHHQKQQNEGEQNYRRFRAKICPGENQAAEDELRKEISKTMFAEMEIVGQFNLGFIVTKLKEDIFLVDQHAADEKYNFEMLQQHTALQAQKLIAPQTLNLTAINEAVLIENLEIFRKNGFDFVIDESAPVTKRAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLIVHMGEMDHPWNCPHGRPTMRHIANLEVISQN