Details from NCBI annotation

Gene Symbol Chst12
Gene Name carbohydrate (chondroitin 4) sulfotransferase 12, transcript variant X2
Entrez Gene ID 101700717

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHST12 ENSCPOG00000024469 (Guinea pig)

Gene Details

carbohydrate (chondroitin 4) sulfotransferase 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019573, Guinea pig)

Protein Percentage 93.54%
CDS Percentage 93.62%
Ka/Ks Ratio 0.06964 (Ka = 0.0293, Ks = 0.4201)

CHST12 ENSG00000136213 (Human)

Gene Details

carbohydrate (chondroitin 4) sulfotransferase 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000258711, Human)

Protein Percentage 84.95%
CDS Percentage 87.3%
Ka/Ks Ratio 0.05976 (Ka = 0.068, Ks = 1.1378)

Chst12 ENSMUSG00000036599 (Mouse)

Gene Details

carbohydrate sulfotransferase 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041663, Mouse)

Protein Percentage 87.59%
CDS Percentage 85.92%
Ka/Ks Ratio 0.04043 (Ka = 0.057, Ks = 1.4101)

Chst12 ENSRNOG00000001252 (Rat)

Gene Details

carbohydrate (chondroitin 4) sulfotransferase 12 (Chst12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063932, Rat)

Protein Percentage 87.59%
CDS Percentage 86.63%
Ka/Ks Ratio 0.04722 (Ka = 0.0572, Ks = 1.2119)

Genome Location

Sequence Coding sequence

Length: 1260 bp    Location: 30503795..30499724   Strand: -
>XM_004840423.1
ATGACCAAGCCCCGGCTCTTCCGGCTGTGGCTGGCCCTGGGCTCTGTCCTCATGGTCCTGCTCATCATCGTGTACTGGGACAACGTGGGCACTGCCCACTTCTACCTGCACACCTCCTTGTCCAGACCTCACGCCCTGGCGCCCCTCCCCACCACCGGGCAGGGGGAGGACACGGAGTTCACCTCCGATGTGGACGAATTTCTAGATAAGTTGCTTAGTTCTGGTGCAAAGCAAAGTGACCTTTCCAAGAAAAAGACCGAGCAACCCCTGGTGCTGGCCTCCAGCAAGCCTGCACTGAGCCGCATGGAGGAGAGCGTGAGGGGCTACGACTGGTCCCCCCAGAACGCCCAGCAGCGCCCCGACGCAGGCCGGCAGCAGGCCGAGCGCAGACGCATGCTGCGCCACTTCTGCGCCAACTCCAGCCTGGCCTTCCCCACCAAAGAGCGCTCCTTCGACGACATCCCCAACTACGAGCTGAACCACCTCATCGTGGACGACCGCCACGGCGTCATCTACTGCTACGTGCCCAAGGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTGCTGAGCGAGAGCCTGCTGGACCGCGGCGCCCCCTACCGAGACCCGCTGGACATCCCGCGGGAGCGCGTGCACAACAGCAGCACGCACCTGACCTTCAACAAGTTCTGGCGCCGCTACGGCAGGTTCTCCAGGCACCTCATGAAGATCAAGCTGAAGAAGTACACCAAGTTCCTCTTCGTGCGCGACCCCTTCGTGCGGCTCATCTCGGCCTTCCGCAGCAAGTTTGAGCTGGAGAACGAGGAGTTTTACCGCAAGTTCGCGGCGCCTATGCTGCGGCTGTATGCCAACCTCACCAGCCTGCCCACCTCGGTGAGCGAGGCCTTCAGCGCCGGCCTCAAGGTCACCTTCGCCAACTTCATCCAGTATCTGCTGGACCCCCACACTGAGAAGCTGGCGCCCTTCAACGAGCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCAGATCGACTACGACTTTGTGGGGAAGCTGGAGACGCTGGACGAGGACGCCGCCCAGCTGCTGCAGCTGCTCAAGGTGGACGCTCAGGTCCACTTCCCCCCGAGCTACCGGAACAGAACTGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGATCCCCCTGGCCTGGCGGCGGCAGCTCTACAAACTCTACGAGGCGGACTTTGTTCTCTTTGGCTACCCCAAGCCCGAACATCTGCTCGGAGACTGA

Related Sequences

XP_004840480.1 Protein

Chst12 PREDICTED: carbohydrate sulfotransferase 12 isoform X2 [Heterocephalus glaber]

Length: 419 aa      View alignments
>XP_004840480.1
MTKPRLFRLWLALGSVLMVLLIIVYWDNVGTAHFYLHTSLSRPHALAPLPTTGQGEDTEFTSDVDEFLDKLLSSGAKQSDLSKKKTEQPLVLASSKPALSRMEESVRGYDWSPQNAQQRPDAGRQQAERRRMLRHFCANSSLAFPTKERSFDDIPNYELNHLIVDDRHGVIYCYVPKVACTNWKRVMIVLSESLLDRGAPYRDPLDIPRERVHNSSTHLTFNKFWRRYGRFSRHLMKIKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYRKFAAPMLRLYANLTSLPTSVSEAFSAGLKVTFANFIQYLLDPHTEKLAPFNEHWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLKVDAQVHFPPSYRNRTASSWEEDWFAKIPLAWRRQLYKLYEADFVLFGYPKPEHLLGD