Sequence details NCBI ID: XM_004840420.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lfng
Gene Name LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, transcript variant X2
Entrez Gene ID 101699763

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LFNG ENSG00000106003 (Human)

Gene Details

LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSP00000222725, Human)

Protein Percentage 90.62%
CDS Percentage 88.11%
Ka/Ks Ratio 0.03944 (Ka = 0.0411, Ks = 1.0416)

Lfng ENSMUSG00000029570 (Mouse)

Gene Details

LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031555, Mouse)

Protein Percentage 86.6%
CDS Percentage 84.27%
Ka/Ks Ratio 0.07489 (Ka = 0.0692, Ks = 0.9246)

Lfng ENSRNOG00000001250 (Rat)

Gene Details

LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (Lfng), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001682, Rat)

Protein Percentage 87.94%
CDS Percentage 84.81%
Ka/Ks Ratio 0.06646 (Ka = 0.0625, Ks = 0.9406)

Genome Location

Sequence Coding sequence

Length: 1122 bp    Location: 30403982..30395825   Strand: -
Raw sequence   
>XM_004840420.1
ATGCTCAAGCGCTGCGGCCGGCGCCTACTGCTGGGGCTGGCGGGCGCGCTGCTCGCTTGCCTTCTGGTGCTCACGGCTGATCCGCCACCGCCTCGGGTGCCCGCCGAGGGCGGCCGGCGTGCGCTACACAGCCTGGTGGCTCCAGCGCCTGGTTTGGAGGCAGCGGCAGCGCCCGAAACACTCGCCCGTGAGGTGCACAGCCTGTCCGAGTACTTCAGCCTGCTAACCCGCGCGCGCAGGGATGCAGGCCTGCCGCCCGCTGGCGCTCCCCGTCCCTCCTATGGTCACCCGCGCGCCCCGGCCGAGCCTCTGGCGCCCCGCGATGTCTTCATCGCGGTCAAGACCACCAGGAAGTTTCACCGCGCGCGCCTCGACCTGTTGCTGGAGACCTGGATCTCGCGCCACAAGGAGATGACTTTCATCTTCACCGACGGGGAGGACAAACTGCTGGCCAGGCACACGGGCAACGTGGTCAACACCAACTGCTCAGCTGCCCACAGCCGCCAGGCGCTGTCCTGCAAGATGGCTGTGGAGTACGACCACTTCGTTGAGTCTGGGAGGAGATGGTTCTGCCACGTGGACGATGACAACTACGTCAACCTGCGGGCCCTGCTTCGGCTGCTGGCCAGCTACCCGCACACCCAGGACATCTACATCGGCAAGCCCAGCCTGGACAGGCCCATCCAGGCTACCGAGCGCATCAGCGAGAACAGGGTGCGTCCTGTCCACTTCTGGTTTGCCACCGGTGGGGCTGGCTTCTGCATCAGCCGAGGGCTGGCACTGAAGATGAGCCCGTGGGCCAGTGGTGGCCACTTCATGAGCACTGCGGAGCGCATCCGGCTGCCAGACGACTGCACTGTGGGCTACATTGTGGAAGCTCTGCTAGGCGTACCCCTCATCCGCAGTGGCCTCTTCCACTCACACCTGGAGAACCTGCAGCAGGTGCCTGCCTCCGAGCTCCATGAGCAGGTGACCCTGAGCTACGGCATGTTTGAGAACAAGCGGAACGCGGTCCATGTGAAGGGCCCCTTCTCAGTGGAGGCTGACCCGTCCAGGTTCCGCTCCATCCACTGCCACCTGTACCCGGACACACCCTGGTGTCCTCACACCGCCATCTTCTAG

Related Sequences

XP_004840477.1 Protein

Lfng PREDICTED: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like isoform X2 [Heterocephalus glaber]

Length: 373 aa      
>XP_004840477.1
MLKRCGRRLLLGLAGALLACLLVLTADPPPPRVPAEGGRRALHSLVAPAPGLEAAAAPETLAREVHSLSEYFSLLTRARRDAGLPPAGAPRPSYGHPRAPAEPLAPRDVFIAVKTTRKFHRARLDLLLETWISRHKEMTFIFTDGEDKLLARHTGNVVNTNCSAAHSRQALSCKMAVEYDHFVESGRRWFCHVDDDNYVNLRALLRLLASYPHTQDIYIGKPSLDRPIQATERISENRVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTVGYIVEALLGVPLIRSGLFHSHLENLQQVPASELHEQVTLSYGMFENKRNAVHVKGPFSVEADPSRFRSIHCHLYPDTPWCPHTAIF