Sequence details NCBI ID: XM_004840415.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Brat1
Gene Name BRCA1-associated ATM activator 1, transcript variant X2
Entrez Gene ID 101698169

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BRAT1 ENSCPOG00000002849 (Guinea pig)

Gene Details

BRCA1-associated ATM activator 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002591, Guinea pig)

Protein Percentage 87.52%
CDS Percentage 88.77%
Ka/Ks Ratio 0.23309 (Ka = 0.0714, Ks = 0.3063)

BRAT1 ENSG00000106009 (Human)

Gene Details

BRCA1-associated ATM activator 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000339637, Human)

Protein Percentage 74.54%
CDS Percentage 79.82%
Ka/Ks Ratio 0.22587 (Ka = 0.1604, Ks = 0.7102)

Brat1 ENSMUSG00000000148 (Mouse)

Gene Details

BRCA1-associated ATM activator 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036016, Mouse)

Protein Percentage 73.72%
CDS Percentage 77.62%
Ka/Ks Ratio 0.20613 (Ka = 0.1674, Ks = 0.8123)

Brat1 ENSRNOG00000001236 (Rat)

Gene Details

Protein Brat1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059762, Rat)

Protein Percentage 73.97%
CDS Percentage 77.66%
Ka/Ks Ratio 0.21605 (Ka = 0.1716, Ks = 0.7942)

Genome Location

Sequence Coding sequence

Length: 2478 bp    Location: 30296740..30284514   Strand: -
Raw sequence   
>XM_004840415.1
ATGGACCCCGAGTGCTCCCGCCTTCTCCCAGCTTTCTGTTCTGTGCTGGTGGATCCCAGGCAGGCGGTGGCAGATGACACCTGTTTGGAAAAGCTGCTGGATTGGTTTAAAACGGTGACTGAGGCTGGGTCCAGCCTGCTGCTGCTGCAGGAGAACCCTTGCCTGGTGGACCTGCTGTCTCATGTGCTGGACCTGAAGCCACAGGATGTGAGCCCCAGGGTCCTCTCCTTTTCCCTGCGCCTCGCCGGAATGTTTGCAGCCCAGGAAGACTGCTTTGAGTACCTTCAGCAGGGGCAGTTGCTGCTGGGGCTCTTTGGGGAGGCGGGACCCCTCAGCTGGGCTGTCTGGAGCGTCCCCACTGTGCGCAGCGGCTGGATCCAGGGCCTGAAATCCCTGGCACAGCACCCCGGGGGCCTGCACTTCCTGGGGGACAGCGGTGCGGTTGATGCCCTCTTCTCCCTGCAGGGAGATTCCAGCCTGTTTGTGGCCTCTGCTGCCAGTCAGCTCCTGGTGCATGTCCTAGCTTTGTCCATGCAAGACAAGGCCGAGGGGTCCCCTAGCCTGAAGGGCAGTGCCTGGCCCGCATGTGCCCAGAAGATTGTGGCCCATGTAGAAGCGTCCTTGTGCTCCACAACTGCCCTGCAAATCACTCAGGCCCTGAACGTCCTCACCACCACCTTTGGGCGCTGCCACAGCCCCTGGACAGAGGTCCTCTGGGGGCAGCTGAGTCCCCTGGTGGCCCACCTGTTGGACAGTGAACCCGTCCCAGCCACACACTCGCTGGTGGACCTCCTCCTCAGCGTGGCCCGTTCTCCTGTGTTTGCTTCTGCAGACTGTACCCTGTGGGAGACTATAGCCCGGATGCTGAGCTGCCTGAGCCCCATGCAAACTGGGCCTCTGGCCTTAGGGACCTTGAAACTTCAGCACTGTCCACAGGCACTGAGATCCCAAGCCTTCGGGGTCCTTCTCCAGCCCCTCGCCTGTATCCTGAGAGCCACTGCTCAGGCCCCTGGACCCCCAGGCCTGCTGGATGAGACTACCCAAGGTTGCTCCATGACGGTGGACACTCTACTGTCTTCTAAGTCGGCCTGTGTGGGGCTTCTGTGCCAGACCCTGGCCCACCTGGAGGAGCTGCAGCCACTGCCCCAGCACCCCTTGCCTTGGCCCCAGACACTCCTGGTGGAAGCTGTGGTGATCATCTTGCGGCTCTGCGATGGCTCAGCAGCCCCCAGCTCCAGTGAGGGGTGCCGCCTCTGTGGGACCCTGGCAGGCTGCATTCGGGTCCAGCGAGCAGCCCTTGGCTTCCTAGGGACACTGACTCTGGGCACAAGCAGCTGGGAGCTGGTGCCACAGGTGTTTGCCATCCTCTTGGAGACCCTCAAGAGCCCCGCCTCCAGCCCGACGGTTCTGAAGAAGGCCTTCCAGGCCGTACTCCACTGGCTCCTGGACTCACCCACGCCCCCTGGCTGTTCCGACCTCGGCCCACACACCCCACTGTTCCTCAGAGAGCTATTCCCTGTGCTGCAGAAGCACCTGTGCAGCCCCTGCTGGGAGGTGAGGGACTCGGCGCTAGAGTTCCTGACGCACCTGAGTATGTGCTGGGGAGGGGAGGCCAACTTCAGGGAGGTGCTCCTTGCTTCTGATGTACCCAAGCTCGCCTGGCAACTCCTGCGAGACCCTGAGAGCTACGTCCGTGCAAGCGCAGTGACCGCCATGGGGCAGCTTTCCAGCCAAGGCCTCCAGGCTGCCTCCGATAGCCCTGGGCATCCAGAGGTCCAGCAGGGCCTGGTTGGGGAGCTCCTGCATATCCTGTCCGTGGACTCGGAGGGGTTCCCGCGAAGGGCAGTCACCCGGGTCTTCACTGAGTGGCTGAGGAACAGCCATGCTGATGTGGTCCAGGACACGGAGTGGTTTGTGGCCACTGTGCTCCAGATGGTGAGCCGGGACCTGGACTGGGAAGTCCGGGCCCAGGGCCTGGAGCTGGTGCAGGTGTTCCTGGCCCAGACACTGGGGCAGCCCAACCCCTCCTGTCCCTATGCCGTGGCCCTCCCCAAGGTCACCCCACCCAGCCCACTCCCTGAGGTGCTGAGGACTCTCTGCCAGATGCAGATCTTTGACTTTGCCTTTCGTGCTTTGTTTGACTGTGATCGACCTGTGGCACAAAAGGCTTGTGACCTCCTCCTCTTTCTGAGGAACAAGAGTGCTCCCTGCAGTGGCCTGCAGGAGGCTGGGGACAGCTCTGATGTGGCCTCTGTGGAGGCCACCCTGGAGAGGTGGCAGGTGGGTGAGCAGGGCCAGCCCCTGGGGAGCCTAGAGCCCGAGGTGGTGCTGGCTGCCTTGAGGTCCATGGACCTGGAGGGCCTCCAGAGCAGGCTGGCTGAGAGCAGCGACCACGTGGAAAAGAGCCCCCAGTCGCTCTTGCAAGATGTCCTGGCCACAGTGGCCCTGCTGGAGGAGAATGTGGCCGACTGCTACTGA

Related Sequences

XP_004840472.1 Protein

Brat1 PREDICTED: BRCA1-associated ATM activator 1 isoform X2 [Heterocephalus glaber]

Length: 825 aa      View alignments
>XP_004840472.1
MDPECSRLLPAFCSVLVDPRQAVADDTCLEKLLDWFKTVTEAGSSLLLLQENPCLVDLLSHVLDLKPQDVSPRVLSFSLRLAGMFAAQEDCFEYLQQGQLLLGLFGEAGPLSWAVWSVPTVRSGWIQGLKSLAQHPGGLHFLGDSGAVDALFSLQGDSSLFVASAASQLLVHVLALSMQDKAEGSPSLKGSAWPACAQKIVAHVEASLCSTTALQITQALNVLTTTFGRCHSPWTEVLWGQLSPLVAHLLDSEPVPATHSLVDLLLSVARSPVFASADCTLWETIARMLSCLSPMQTGPLALGTLKLQHCPQALRSQAFGVLLQPLACILRATAQAPGPPGLLDETTQGCSMTVDTLLSSKSACVGLLCQTLAHLEELQPLPQHPLPWPQTLLVEAVVIILRLCDGSAAPSSSEGCRLCGTLAGCIRVQRAALGFLGTLTLGTSSWELVPQVFAILLETLKSPASSPTVLKKAFQAVLHWLLDSPTPPGCSDLGPHTPLFLRELFPVLQKHLCSPCWEVRDSALEFLTHLSMCWGGEANFREVLLASDVPKLAWQLLRDPESYVRASAVTAMGQLSSQGLQAASDSPGHPEVQQGLVGELLHILSVDSEGFPRRAVTRVFTEWLRNSHADVVQDTEWFVATVLQMVSRDLDWEVRAQGLELVQVFLAQTLGQPNPSCPYAVALPKVTPPSPLPEVLRTLCQMQIFDFAFRALFDCDRPVAQKACDLLLFLRNKSAPCSGLQEAGDSSDVASVEATLERWQVGEQGQPLGSLEPEVVLAALRSMDLEGLQSRLAESSDHVEKSPQSLLQDVLATVALLEENVADCY