Sequence details NCBI ID: XM_004840360.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Elfn1
Gene Name extracellular leucine-rich repeat and fibronectin type III domain containing 1, transcript variant X2
Entrez Gene ID 101710278

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ELFN1 ENSCPOG00000008029 (Guinea pig)

Gene Details

extracellular leucine-rich repeat and fibronectin type III domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016286, Guinea pig)

Protein Percentage 96.62%
CDS Percentage 93.07%
Ka/Ks Ratio 0.0351 (Ka = 0.0161, Ks = 0.46)

ELFN1 ENSG00000225968 (Human)

Gene Details

extracellular leucine-rich repeat and fibronectin type III domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000456548, Human)

Protein Percentage 90.91%
CDS Percentage 87.88%
Ka/Ks Ratio 0.03965 (Ka = 0.0435, Ks = 1.096)

Elfn1 ENSMUSG00000048988 (Mouse)

Gene Details

leucine rich repeat and fibronectin type III, extracellular 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053869, Mouse)

Protein Percentage 89.93%
CDS Percentage 85.07%
Ka/Ks Ratio 0.04219 (Ka = 0.0498, Ks = 1.1799)

Elfn1 ENSRNOG00000022767 (Rat)

Gene Details

extracellular leucine-rich repeat and fibronectin type III domain containing 1 (Elfn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035917, Rat)

Protein Percentage 90.06%
CDS Percentage 85.01%
Ka/Ks Ratio 0.03941 (Ka = 0.0478, Ks = 1.2116)

Genome Location

Sequence Coding sequence

Length: 2499 bp    Location: 27092242..27141459   Strand: +
Raw sequence   
>XM_004840360.1
ATGGCTGGGCGTGGGTGGGGTGTGCTGTGGGTGTGCTTGGCAGCGGCCGCCTTGCTGCATGCGGGCGGGCTGGCCCGTGGTGACTGCTGGCTGATCGAGGGCGACAAGGGCTTTGTGTGGCTGGCCATCTGCAGCCAGAACCAGCCCCCCTACGAGGCCATCCCGCAGCAGATCAACAGCACAATCGTGGACCTGCGGCTGAATGAGAACCGCATCCGCAGCGTGCAGTATGCCTCGCTGAGCCGCTTCGGCAACCTCACGTACCTCAACCTCACCAAGAACGAGATTGGCTACATCGAGGATGGGGCCTTCTCGGGCCAGTTCAACCTGCAGGTGCTGCAGCTGGGCTACAACCGGCTGCGCAACCTCACGGAGGGCATGCTGCGTGGCCTGGGCAAGCTGGAGTACCTCTACCTGCAGGCCAACCTCATCGAAGTGGTCATGGCCAGCGCCTTCTGGGAGTGTCCCAGCATTGTCAACATCGACCTGTCCATGAACCGCATCCAGCAGCTGAGTAGTGGCACCTTCTCGGGCCTGACCAAGCTCTCCGTGTGTGAGCTGTACAGCAACCCCTTCTACTGCTCCTGCGAGCTGCTGGGCTTCCTGCGCTGGCTGGCTGCCTTCACCAACACCACGCAGACCTACGACCGCATGCAGTGTGAGTCTCCACCCATCTACTCTGGCTACTTCCTCCTGGGCCAGGGCCGCCATGGCCACCGCAGCATCCTCAGCAAACTGCAGTCTGTCTGTACAGAGGACTCCTATGCAGCAGAGGTGGCCGGGCCTCGTCTGGTATCTGGCCGCTCACAGCCAGGCCGCTCACCACCACCACCACCACCAGAGCCGAGCTTGGGGAGCCGAGCCGATGTACCCTGCGGCGATGACGAGTGTTTCTCTGGTGACGGCACCACACCACTGGTGGCCCTGCCCACACTGGCCACCCAGGCTGAGGCTCGTCCCCTCATCAAGGTCAAGCAGCTGACCCAGAACTCGGCCACCATCACAGTGCAGCTGCCCAGCCCGTTCAACCGCATGTACACGCTGGAACATTACAACAACAGCAAGTCCTCCACCGTGTCCAGGCTGACACAGGCCCAGGAGGAGATCCGCCTCACCAACCTGTACACGCTAACCAACTACACCTACTGTGTGGTGTCCACTAGCTCAGGCACACACCACAACCACACCTGCCTCACCATCTGCCTGCCCAAGCCACCCAGCCCCCCGGGGCCTGTGCCCAGCCCTTCCACAGCCACCCATTATATCATGACCATCCTGGGCTGCCTCTTTGGCATGGTGCTGGTGCTGGGCGCTGTCTACTACTGCCTGCGCAGGCGGAGGCGCCAGGAGGAGAAGCACAAGAAGGTGGCCTCAGCAGCTGCGGCTGGCAGCCTCAAGAAGACCATTATCGAGCTCAAGTACGGACCCGAGATGGAGGCACCTGGTCTGGCCCCGCTGTCCCAGGGCCCGCTGCTGGGCCCCGAGGCTGTGACCCGCATCCCGTACCTGCCTGCCGCCACCAGCGAGGTAGAGCAGTACAAGCTAGTGGAGAGCGGGGAGACGCCCAAGGCCAGCAAGGGAAACTACATGGAGGTGCGCACGGGAGAACCAGAACGCAGGGACTGCGAGCTGGGCCGGAAAGGCCCTGAGACCCAAAGCTCGGTGGCTGAGATCTCCACCATCGCCAAAGAGGTGGACAAGGTCAACCAGATCATCAACAACTGCATCGATGCGCTCAAGTCTGAGTCCACCTCCTTCCAGGGTGCCAAGTCTGGGGCTGTGTCCACGGCTGAGCCCCAGCTGGTGCTGCTGTCTGAGCCACTGGCCACCAAGCACGGCTTCCTGTCACCCGTGTACAAGGATGCCTTCGGCCACGGCCTGCAGCGGCATCACAGCGTGGAGGCAGCAACTGGGCCCCCAAGGGCCAGCAGCTCATCCAGCGGCTCCACACGCAGCCCTCGGGCCTTCCGCACGGATCCCCCTGGAATGCACAAAGCCACGGCTGCCGAAGCCAAGTACATTGAGAAGAGCTCACCAGCAGCAGAGGCCATCCTCACTGTGACACCCGCAGCCGCTGTGCTTCGGGCCGAGGCCGAGAAGAGCCGCCAGTATGGCGAGCACCGGCACTCCTACCCCGGCTCCCACTCCGCCGCCGAGCCGCCTGTGCCCGCCCCGCCACCGCCGGCCCATGAGGGCCTGGGCGGCCGCAAGGCGTCCATCCTGGAGCCTTTGACCCGGCCTCGGCCCCGCGACCTCGCCTACTCCCAGCTGTCGCCACAATACCACAACCTGAGCTACGCGTCCAGCCCCGAATACCCCTGCAGGGCCTCGCAGAGTATCTGGGAGCGCCTCAGACTGAGCCGGCGGCGCCCCAAGGACGACGAGGAGTTCATGGCGGCCGGCCACGCCCTGCGCAAGAAGGTCCAGTTCGCCAAGGATGAGGACCTGCACGACATCCTGGACTACTGGAAGGGCGTGTCCGCCCAGCACAAGTCCTGA

Related Sequences

XP_004840417.1 Protein

Elfn1 PREDICTED: protein ELFN1 isoform X2 [Heterocephalus glaber]

Length: 832 aa      View alignments
>XP_004840417.1
MAGRGWGVLWVCLAAAALLHAGGLARGDCWLIEGDKGFVWLAICSQNQPPYEAIPQQINSTIVDLRLNENRIRSVQYASLSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGMLRGLGKLEYLYLQANLIEVVMASAFWECPSIVNIDLSMNRIQQLSSGTFSGLTKLSVCELYSNPFYCSCELLGFLRWLAAFTNTTQTYDRMQCESPPIYSGYFLLGQGRHGHRSILSKLQSVCTEDSYAAEVAGPRLVSGRSQPGRSPPPPPPEPSLGSRADVPCGDDECFSGDGTTPLVALPTLATQAEARPLIKVKQLTQNSATITVQLPSPFNRMYTLEHYNNSKSSTVSRLTQAQEEIRLTNLYTLTNYTYCVVSTSSGTHHNHTCLTICLPKPPSPPGPVPSPSTATHYIMTILGCLFGMVLVLGAVYYCLRRRRRQEEKHKKVASAAAAGSLKKTIIELKYGPEMEAPGLAPLSQGPLLGPEAVTRIPYLPAATSEVEQYKLVESGETPKASKGNYMEVRTGEPERRDCELGRKGPETQSSVAEISTIAKEVDKVNQIINNCIDALKSESTSFQGAKSGAVSTAEPQLVLLSEPLATKHGFLSPVYKDAFGHGLQRHHSVEAATGPPRASSSSSGSTRSPRAFRTDPPGMHKATAAEAKYIEKSSPAAEAILTVTPAAAVLRAEAEKSRQYGEHRHSYPGSHSAAEPPVPAPPPPAHEGLGGRKASILEPLTRPRPRDLAYSQLSPQYHNLSYASSPEYPCRASQSIWERLRLSRRRPKDDEEFMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS