Details from NCBI annotation

Gene Symbol Epdr1
Gene Name ependymin related protein 1 (zebrafish)
Entrez Gene ID 101714446

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EPDR1 ENSCPOG00000010396 (Guinea pig)

Gene Details

ependymin related 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009338, Guinea pig)

Protein Percentage 89.69%
CDS Percentage 91.33%
Ka/Ks Ratio 0.19082 (Ka = 0.0509, Ks = 0.2667)

EPDR1 ENSG00000086289 (Human)

Gene Details

ependymin related 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000199448, Human)

Protein Percentage 80.91%
CDS Percentage 81.97%
Ka/Ks Ratio 0.14616 (Ka = 0.1091, Ks = 0.7466)

Epdr1 ENSMUSG00000002808 (Mouse)

Gene Details

ependymin related protein 1 (zebrafish)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002885, Mouse)

Protein Percentage 77.13%
CDS Percentage 78.18%
Ka/Ks Ratio 0.13214 (Ka = 0.1335, Ks = 1.0099)

Epdr1 ENSRNOG00000018989 (Rat)

Gene Details

ependymin related 1 (Epdr1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025674, Rat)

Protein Percentage 78.48%
CDS Percentage 78.77%
Ka/Ks Ratio 0.12262 (Ka = 0.1225, Ks = 0.999)

Genome Location

Sequence Coding sequence

Length: 672 bp    Location: 23330148..23303102   Strand: -
>XM_004840277.1
ATGCCAGGGCGCGCCCCACCCTGCGAGGCCCAGTGCAGCCTGGCCGCCTGGCTCTGGGTCTGCGCGCTGGGCGGGCTGTGCGCGCTGGGCACCGCAGGGTCCCCCGGGACGCCGCGCCCCTGCCAGGCCCCGCAGCAGTGGGAGGGACGCCAGGTCCTGTTCCTGCAGAGCAGTGGACACAACAGCCGGGCGCTGCTGTCCTATGACGGCCCCAACCAGCGCGTGCGGGTGCTGGACGAGAAGAAGGCGCTTATCCCTTGCAAAAGATTATTTGAATATATTTTGCTCTATAAGGATGGAGTGATGTTCCAGATTGAACAAGCCACCAAGCAGTGCTCCAAGTTCCCCCTGACAACAGCCTGGGACCCTCTTGACATTCCGGACAACTCCACCTTTGAAGACCAGTACTCAATTGGAGGCCCTCAGGAGCAAATCACTGTCCAGGAGTGGTCCAACAGGAAGTCGGCGAGAACCTATGAAACCTGGATTGGTGTCTATACAGCCAAGGATTGTTATCCTGTCCAGGAAACCTTCATCCAAAATTACAGTGTAGTCCTGTCCATGCGGTTTTTCGATGTACAGCTGGGCATTAAAGACCCGTCTGTGTTCACTCCTCCGAGCACGTGCCACACGGCCCAGGCTGAGAGTATGAGCGAGGACTGTGCTTGGTGA

Related Sequences

XP_004840334.1 Protein

Epdr1 PREDICTED: mammalian ependymin-related protein 1 [Heterocephalus glaber]

Length: 223 aa      View alignments
>XP_004840334.1
MPGRAPPCEAQCSLAAWLWVCALGGLCALGTAGSPGTPRPCQAPQQWEGRQVLFLQSSGHNSRALLSYDGPNQRVRVLDEKKALIPCKRLFEYILLYKDGVMFQIEQATKQCSKFPLTTAWDPLDIPDNSTFEDQYSIGGPQEQITVQEWSNRKSARTYETWIGVYTAKDCYPVQETFIQNYSVVLSMRFFDVQLGIKDPSVFTPPSTCHTAQAESMSEDCAW