Details from NCBI annotation

Gene Symbol Amph
Gene Name amphiphysin, transcript variant X5
Entrez Gene ID 101708603

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AMPH ENSCPOG00000006478 (Guinea pig)

Gene Details

amphiphysin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005833, Guinea pig)

Protein Percentage 92.89%
CDS Percentage 92.16%
Ka/Ks Ratio 0.20953 (Ka = 0.0416, Ks = 0.1987)

AMPH ENSG00000078053 (Human)

Gene Details

amphiphysin

External Links

Gene Match (Ensembl Protein ID: ENSP00000348602, Human)

Protein Percentage 89.51%
CDS Percentage 88.42%
Ka/Ks Ratio 0.16581 (Ka = 0.0581, Ks = 0.3501)

Amph ENSMUSG00000021314 (Mouse)

Gene Details

amphiphysin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003345, Mouse)

Protein Percentage 86.79%
CDS Percentage 84.54%
Ka/Ks Ratio 0.15198 (Ka = 0.0803, Ks = 0.5286)

Amph ENSRNOG00000012490 (Rat)

Gene Details

amphiphysin (Amph), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017102, Rat)

Protein Percentage 86.62%
CDS Percentage 83.31%
Ka/Ks Ratio 0.15057 (Ka = 0.09, Ks = 0.5977)

Genome Location

Sequence Coding sequence

Length: 1923 bp    Location: 22399325..22615523   Strand: +
>XM_004840268.1
ATGGCCGACATCAAGTCCGGCATCTTCGCCAAGAACGTGCAGAAGCGGCTCAGCCGCGCGCAGGAGAAGGTCCTCCAGAAGCTGGGGAAAGCCGATGAGACAAAAGATGAGCAGTTTGAAGAATATGTCCAGAACTTCAAGAGGCAAGAGGCAGAGGGTACCAGACTGCAGCGAGAACTCCGAGGGTATTTAGCAGCCATCAAAGGCATGCAAGAGGCCTCCATGAAGCTCACTGAGTCCCTGCATGAAGTCTACGAACCAGATTGGTATGGGCGGGAAGACGTGAAAATGGTTGGTGAGAAATGTGATGTGCTATGGGAAGACTTCCATCAAAAACTAGTGGATGGGTCCTTGCTGACACTGGACACCTATCTGGGCCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTGGTGGACTATGACAGTGCCCGCCACCATCTGGAAGCCCTGCAAAGCTCCAAGAGGAAGGATGAGAGTCGGATCTCTAAGGCAGAAGAGGAATTTCAGAAAGCGCAGAAAGTGTTTGAAGAGTTTAATGTTGACTTACAAGAAGAGTTACCTTCATTGTGGTCAAGCCGAGTTGGATTTTATGTTAACACTTTCAAAAACGTTTCCAGTCTGGAGGCCAAGTTTCATAAGGAAATTGCAGTGCTTTGCCACAAGCTGTATGAAGTGATGACAAAACTGGGTGACCAGCATGCTGACAAGGCCTTCACCATCCAAGGCGCCCCCAGTGATTCAGGTCCTCTACGCATCGCAAAGACGCCGTCACCTCCTGAGGAGCCTTCACCCCTGCCCAGCCCAACAGCCAGTCCCAATCATACGCTAGCACCTGCGTCTCCTGCCCCAGCACGGCCCAGATCACCTTCACAGACAAGGAAAGGGCCACCTGTCCCACCTCTGCCAAAAGTCACCCCAACAAAGGAACTGCAGCAGGAGAATATCATCAGTTTCTTTGAGGACAACTTTGTTCCGGAAATCAATGTGACAACACCTTCACAGAATGAAGTCACTGAAGTGAAGAAGGAGGAGACTCTGCTGGATCTGGACTTTGACCCCTTCAAGCCAGAAGTGACACCTGCAGGTTCTGCTGGAATGACCCACTCACCCATGTCTCAGACATTGCCGTGGGACTTATGGACGACAAGCACTGATTTGGTACACCCGGCTTCTGGTGGTTCATTCAATGGATTCACCCAGCCCCAGGACACTTCCTTTACAATGCAGGCAGATCAGAGTATGATCTGCAGCTTGGTCGCACCTGGACCAGATGCCGATGTGGCAGTGGGGACCTTGGTGCCAGCCGAGGGGGTCTCTGTGGAAGAGACAGAGGAGGAGAAAGCAGCTGTTCCTGCCGGGGAAGGAGGAGGTCCAGAGGAGGCCACAGTTGAGACTGAAGTCACCGAGGTTTCGGACAGTGACAGACCTCAGGCAGCAGCAGAGATGGAAGCAGAAGCACCTCAGGAGAAAGTCATCCCTTCTGTGGTCATCGAGCCCGCCTCCAACAACGAAGGGAACGGAGAACACGAAGTAGCCGTGGAAGCAGAGACCCCAAAGGGCCCTGAGGATGTGGCTCCTGCGGGCCCCACGGGCAAGACGCCAGAGCTGGCCACGGAGCCCAAGCCGGGGGAGGACGCCCAGGCCACGCCTCCTGCAGGCCAGGCCTCCCAGGAGCTGCCCCCTGGCTTTCTCTACAAGGTGGAAGCACTGCATGATTTTGAGGCAGCAAATTCTGATGAACTTACCCTCCAAAGGGGTGACATGGTGCTGGTGGTTCCCTCCGATTCAGAAGCTGACCAGGATGCAGGCTGGCTGGTGGGAGTAAAGGAATCAGACTGGCTTCAGCACAGAGACCTGGCTGCCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGGCGCCTGGAGTAG

Related Sequences

XP_004840325.1 Protein

Amph PREDICTED: amphiphysin isoform X5 [Heterocephalus glaber]

Length: 640 aa      View alignments
>XP_004840325.1
MADIKSGIFAKNVQKRLSRAQEKVLQKLGKADETKDEQFEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWYGREDVKMVGEKCDVLWEDFHQKLVDGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSSRVGFYVNTFKNVSSLEAKFHKEIAVLCHKLYEVMTKLGDQHADKAFTIQGAPSDSGPLRIAKTPSPPEEPSPLPSPTASPNHTLAPASPAPARPRSPSQTRKGPPVPPLPKVTPTKELQQENIISFFEDNFVPEINVTTPSQNEVTEVKKEETLLDLDFDPFKPEVTPAGSAGMTHSPMSQTLPWDLWTTSTDLVHPASGGSFNGFTQPQDTSFTMQADQSMICSLVAPGPDADVAVGTLVPAEGVSVEETEEEKAAVPAGEGGGPEEATVETEVTEVSDSDRPQAAAEMEAEAPQEKVIPSVVIEPASNNEGNGEHEVAVEAETPKGPEDVAPAGPTGKTPELATEPKPGEDAQATPPAGQASQELPPGFLYKVEALHDFEAANSDELTLQRGDMVLVVPSDSEADQDAGWLVGVKESDWLQHRDLAAYKGLFPENFTRRLE