Details from NCBI annotation
| Gene Symbol |
Amph |
|
Gene Name
|
amphiphysin, transcript variant X5 |
| Entrez Gene ID |
101708603
|
Database interlinks
Part of NW_004624740.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
amphiphysin
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000005833, Guinea pig)
| Protein Percentage |
92.89% |
| CDS Percentage |
92.16% |
| Ka/Ks Ratio |
0.20953 (Ka = 0.0416, Ks = 0.1987) |
Gene Details
amphiphysin
External Links
Gene Match(Ensembl Protein ID:ENSP00000348602, Human)
| Protein Percentage |
89.51% |
| CDS Percentage |
88.42% |
| Ka/Ks Ratio |
0.16581 (Ka = 0.0581, Ks = 0.3501) |
Gene Details
amphiphysin
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000003345, Mouse)
| Protein Percentage |
86.79% |
| CDS Percentage |
84.54% |
| Ka/Ks Ratio |
0.15198 (Ka = 0.0803, Ks = 0.5286) |
Gene Details
amphiphysin (Amph), mRNA
External Links
| Protein Percentage |
86.62% |
| CDS Percentage |
83.31% |
| Ka/Ks Ratio |
0.15057 (Ka = 0.09, Ks = 0.5977) |
Sequence SequenceType object (2)
Length: 1923
bp
Location: 22399325..22615523
Strand: +
>XM_004840268.1
ATGGCCGACATCAAGTCCGGCATCTTCGCCAAGAACGTGCAGAAGCGGCTCAGCCGCGCGCAGGAGAAGGTCCTCCAGAAGCTGGGGAAAGCCGATGAGACAAAAGATGAGCAGTTTGAAGAATATGTCCAGAACTTCAAGAGGCAAGAGGCAGAGGGTACCAGACTGCAGCGAGAACTCCGAGGGTATTTAGCAGCCATCAAAGGCATGCAAGAGGCCTCCATGAAGCTCACTGAGTCCCTGCATGAAGTCTACGAACCAGATTGGTATGGGCGGGAAGACGTGAAAATGGTTGGTGAGAAATGTGATGTGCTATGGGAAGACTTCCATCAAAAACTAGTGGATGGGTCCTTGCTGACACTGGACACCTATCTGGGCCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTGGTGGACTATGACAGTGCCCGCCACCATCTGGAAGCCCTGCAAAGCTCCAAGAGGAAGGATGAGAGTCGGATCTCTAAGGCAGAAGAGGAATTTCAGAAAGCGCAGAAAGTGTTTGAAGAGTTTAATGTTGACTTACAAGAAGAGTTACCTTCATTGTGGTCAAGCCGAGTTGGATTTTATGTTAACACTTTCAAAAACGTTTCCAGTCTGGAGGCCAAGTTTCATAAGGAAATTGCAGTGCTTTGCCACAAGCTGTATGAAGTGATGACAAAACTGGGTGACCAGCATGCTGACAAGGCCTTCACCATCCAAGGCGCCCCCAGTGATTCAGGTCCTCTACGCATCGCAAAGACGCCGTCACCTCCTGAGGAGCCTTCACCCCTGCCCAGCCCAACAGCCAGTCCCAATCATACGCTAGCACCTGCGTCTCCTGCCCCAGCACGGCCCAGATCACCTTCACAGACAAGGAAAGGGCCACCTGTCCCACCTCTGCCAAAAGTCACCCCAACAAAGGAACTGCAGCAGGAGAATATCATCAGTTTCTTTGAGGACAACTTTGTTCCGGAAATCAATGTGACAACACCTTCACAGAATGAAGTCACTGAAGTGAAGAAGGAGGAGACTCTGCTGGATCTGGACTTTGACCCCTTCAAGCCAGAAGTGACACCTGCAGGTTCTGCTGGAATGACCCACTCACCCATGTCTCAGACATTGCCGTGGGACTTATGGACGACAAGCACTGATTTGGTACACCCGGCTTCTGGTGGTTCATTCAATGGATTCACCCAGCCCCAGGACACTTCCTTTACAATGCAGGCAGATCAGAGTATGATCTGCAGCTTGGTCGCACCTGGACCAGATGCCGATGTGGCAGTGGGGACCTTGGTGCCAGCCGAGGGGGTCTCTGTGGAAGAGACAGAGGAGGAGAAAGCAGCTGTTCCTGCCGGGGAAGGAGGAGGTCCAGAGGAGGCCACAGTTGAGACTGAAGTCACCGAGGTTTCGGACAGTGACAGACCTCAGGCAGCAGCAGAGATGGAAGCAGAAGCACCTCAGGAGAAAGTCATCCCTTCTGTGGTCATCGAGCCCGCCTCCAACAACGAAGGGAACGGAGAACACGAAGTAGCCGTGGAAGCAGAGACCCCAAAGGGCCCTGAGGATGTGGCTCCTGCGGGCCCCACGGGCAAGACGCCAGAGCTGGCCACGGAGCCCAAGCCGGGGGAGGACGCCCAGGCCACGCCTCCTGCAGGCCAGGCCTCCCAGGAGCTGCCCCCTGGCTTTCTCTACAAGGTGGAAGCACTGCATGATTTTGAGGCAGCAAATTCTGATGAACTTACCCTCCAAAGGGGTGACATGGTGCTGGTGGTTCCCTCCGATTCAGAAGCTGACCAGGATGCAGGCTGGCTGGTGGGAGTAAAGGAATCAGACTGGCTTCAGCACAGAGACCTGGCTGCCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGGCGCCTGGAGTAG
Related Sequences
Amph PREDICTED: amphiphysin isoform X5 [Heterocephalus glaber]
Length: 640
aa
View alignments>XP_004840325.1
MADIKSGIFAKNVQKRLSRAQEKVLQKLGKADETKDEQFEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWYGREDVKMVGEKCDVLWEDFHQKLVDGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSSRVGFYVNTFKNVSSLEAKFHKEIAVLCHKLYEVMTKLGDQHADKAFTIQGAPSDSGPLRIAKTPSPPEEPSPLPSPTASPNHTLAPASPAPARPRSPSQTRKGPPVPPLPKVTPTKELQQENIISFFEDNFVPEINVTTPSQNEVTEVKKEETLLDLDFDPFKPEVTPAGSAGMTHSPMSQTLPWDLWTTSTDLVHPASGGSFNGFTQPQDTSFTMQADQSMICSLVAPGPDADVAVGTLVPAEGVSVEETEEEKAAVPAGEGGGPEEATVETEVTEVSDSDRPQAAAEMEAEAPQEKVIPSVVIEPASNNEGNGEHEVAVEAETPKGPEDVAPAGPTGKTPELATEPKPGEDAQATPPAGQASQELPPGFLYKVEALHDFEAANSDELTLQRGDMVLVVPSDSEADQDAGWLVGVKESDWLQHRDLAAYKGLFPENFTRRLE