Details from NCBI annotation

Gene Symbol Taf6
Gene Name TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa, transcript variant X2
Entrez Gene ID 101726460

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TAF6 ENSCPOG00000005116 (Guinea pig)

Gene Details

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004602, Guinea pig)

Protein Percentage 99.56%
CDS Percentage 95.03%
Ka/Ks Ratio 0.01165 (Ka = 0.0022, Ks = 0.1854)

TAF6 ENSG00000106290 (Human)

Gene Details

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000399982, Human)

Protein Percentage 97.64%
CDS Percentage 90.25%
Ka/Ks Ratio 0.02562 (Ka = 0.0118, Ks = 0.46)

Taf6 ENSMUSG00000036980 (Mouse)

Gene Details

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106561, Mouse)

Protein Percentage 97.79%
CDS Percentage 89.38%
Ka/Ks Ratio 0.02244 (Ka = 0.0107, Ks = 0.4767)

TAF6 ENSRNOG00000001355 (Rat)

Gene Details

Transcription initiation factor TFIID subunit 6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001829, Rat)

Protein Percentage 97.79%
CDS Percentage 89.28%
Ka/Ks Ratio 0.02166 (Ka = 0.0106, Ks = 0.4911)

Genome Location

Sequence Coding sequence

Length: 2037 bp    Location: 16877651..16883657   Strand: +
>XM_004840229.1
ATGGCTGAAGAGAAGAAGCTGAAGCTCAGCAATACTGTGCTGCCTTCTGAGTCCATGAAGGTCGTGGCTGAATCAATGGGCATCGCTCAGATTCAGGAGGAAACCTGCCAGCTGTTGACAGATGAGGTCAGCTACCGAATCAAAGAGATTGCACAGGATGCTCTCAAGTTCATGCACATGGGAAAGCGACAAAAGCTCACCACCAGTGATATTGACTATGCACTGAAACTGAAGAATGTTGAGCCACTCTATGGCTTCCATGCTCAGGAATTCATTCCTTTCCGTTTTGCATCTGGTGGGGGCCGAGAGCTCTACTTCTATGAGGAGAAGGAGGTTGATCTAAGTGACATCATCAATACTCCTCTGCCTCGGGTGCCTCTGGATGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAAGGCTGCCAGCCAGCTATACCCGAGAATCCACCCCCAGCTCCCAAAGAGCAGCAGAAGGCTGAGGCCACAGAACCCCTGAAGTCAGCAAAGCCAGGCCAGGAGGAAGATGGACCCCTGAAAGGCAAAGGTCAAGGGGCCACCCCAGCTGACAGCAAAGGGAAAGAGAAGAAGGCACCACCCTTGCTGGAGGGGGCCTCTTTGCGCCTGAAGCCTCGCAGCATCCATGAGCTCTCAGTGGAGCAGCAGCTGTACTACAAGGAGATCACCGAAGCCTGTGTGGGGTCCTGTGAGGCCAAGAGAGCGGAAGCTCTGCAGAGCATTGCCACAGACCCAGGGCTCTATCAGATGCTGCCGAGGTTCAGTACCTTCATCTCCGAGGGGGTCCGCGTCAATGTGGTTCAGAATAACCTGGCCCTGCTCATCTATCTGATGCGCATGGTGAAGGCACTGATGGACAACCCTACGTTGTATCTAGAAAAATATGTGCATGAGCTGATTCCAGCTGTGATGACCTGCATCGTGAGCAGACAGCTGTGCCTGCGACCTGACGTGGACAATCACTGGGCGCTGCGGGACTTTGCGGCCCGCCTAGTGGCCCAGATCTGCAAGCATTTCAGCACAACCACTAACAACATCCAGTCCCGGATCACAAAGACCTTCACTAAGAGCTGGGTGGACGAGAAGACTCCCTGGACAACTCGTTATGGCTCCATTGCAGGCCTGGCAGAGCTGGGACATGATGTGATTAAGACTCTGATTCTGCCACGGCTGCAGCAGGAGGGGGAGCGGATCCGCAGCGTCCTGGATGGCCCAGTGCTGAGCAACATCGACCGCATTGGAGCTGACCATGTGCAGAGCCTCTTGCTGAAACACTGTGCACCTGTACTGGCTAAGCTGCACCCCCCGCCCGACAATCAGGATGCCTATCGGGCAGAATTTGGGTCCCTCGGGCCCCTCCTCTGCTCCCATGTGGTCAAGGCCCGGGCCCAGGCTGCTCTGCAGGCACAGCAGGTCAACAGGACCACACTGACCATCACCCAGCCCCGACCCACGCTGACCCTCTCTCAGGCCCCTCAGTCTGGCCCTCGGACCCCGGGCTTGCTGAAGGTCCCTGGCTCCATCGCACTGCCAGTCCAGACACTGGTGTCTGCTCGAGCTGCTGCCCCGCCTCAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCTCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCAGCCCCTGGCTCAGGCTCCACCACCACCTCTCCTGTCACTACCACAGTCCCCAGTGTGCAGCCCATTGTCAAGCTGGTCTCCACTGCCTCCACCGCACCCCCCAGCACAGCCCCCTCTGGGCCTGGCAGTGTCCAGAAGTACATCGTGGTCTCACTGCCCCCAACAGGAGATGGCAAAGGAGGCCCTCCCTCCCATCCTTCTCCAGTCCCTCCCACCTCATCCTCCCCCTCTCCACTTGGGGGCAGTGCCCTCTGTGGGGGGAAACAGGAAGCTGGGGACAGCCCTCCTCCAGCTCCAGGGACTCCGAAGGCAAATGGTTCCCAGCCCCCTGGACCTGGCTCCCCTCAGCCTGCTCTGTGA

Related Sequences

XP_004840286.1 Protein

Taf6 PREDICTED: transcription initiation factor TFIID subunit 6 isoform X2 [Heterocephalus glaber]

Length: 678 aa      View alignments
>XP_004840286.1
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPADSKGKEKKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLHPPPDNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQSGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTASTAPPSTAPSGPGSVQKYIVVSLPPTGDGKGGPPSHPSPVPPTSSSPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPPGPGSPQPAL