Details from NCBI annotation

Gene Symbol Cops6
Gene Name COP9 signalosome subunit 6, transcript variant X2
Entrez Gene ID 101724377

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COPS6 ENSCPOG00000022041 (Guinea pig)

Gene Details

COP9 signalosome subunit 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015531, Guinea pig)

Protein Percentage 99.38%
CDS Percentage 94.63%
Ka/Ks Ratio 0.01864 (Ka = 0.0043, Ks = 0.2312)

COPS6 ENSG00000168090 (Human)

Gene Details

COP9 signalosome subunit 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000304102, Human)

Protein Percentage 99.07%
CDS Percentage 92.36%
Ka/Ks Ratio 0.01463 (Ka = 0.0056, Ks = 0.3836)

Cops6 ENSMUSG00000019494 (Mouse)

Gene Details

COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019638, Mouse)

Protein Percentage 98.76%
CDS Percentage 91.2%
Ka/Ks Ratio 0.01218 (Ka = 0.0056, Ks = 0.4638)

Cops6 ENSRNOG00000001346 (Rat)

Gene Details

COP9 signalosome subunit 6 (Cops6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001820, Rat)

Protein Percentage 98.14%
CDS Percentage 90.37%
Ka/Ks Ratio 0.01936 (Ka = 0.01, Ks = 0.5149)

Genome Location

Sequence Coding sequence

Length: 972 bp    Location: 16899296..16896631   Strand: -
>XM_004840222.1
ATGGCGGCGGCGGCTGCGACAAACGGGACCGGAGGGAGCAGCGGGATGGAGGTGGATACAGCAGTAGTCCCCAGCGTCATGGCCTCCGGAGTCACGGGTAGCGTTTCCGTCGCTCTTCATCCCCTTGTCATTCTCAACATCTCAGACCACTGGATCCGCATGCGCTCCCAGGAGGGGCGTCCTGTACAGGTGATTGGGGCTCTGATCGGGAAACAGGAGGGCCGAAATATCGAGGTGATGAACTCCTTTGAGCTGCTATCCCACACCGTGGAAGAGAAGATTATCATCGACAAGGAATATTATTACACCAAGGAGGAGCAGTTTAAACAGGTATTCAAGGAGCTGGAATTTCTGGGTTGGTATACCACAGGGGGGCCGCCTGATCCCTCCGACATCCACGTCCATAAGCAGGTGTGTGAGATAATTGAGAGCCCCCTTTTCCTTAAGTTGAACCCTATGACCAAGCACACAGATCTGCCTGTCAGCGTGTTTGAGTCTGTCATCGATATAATCAATGGAGAGGCTACAATGCTATTTGCTGAGCTCACGTATACCCTGGCTACAGAGGAAGCTGAACGCATTGGTGTAGACCATGTAGCCCGAATGACAGCAACAGGCAGTGGAGAGAACTCTACTGTGGCTGAACATTTGATAGCACAGCACAGCGCCATCAAGATGCTGCATAGCCGTGTCAAGCTTATCTTGGAATATGTCAAGGCCTCTGAAGCAGGAGAAGTCCCCTTCAACCATGAGATCTTGCGGGAGGCCTATGCTCTGTGTCACTGCCTCCCAGTGCTCAGCACAGACAAATTCAAGACAGACTTTTATGATCAATGCAATGATGTGGGCCTCATGGCTTACCTTGGCACCATCACCAAAACTTGCAACACCATGAACCAGTTTGTGAATAAATTCAACGTCCTCTACGACCGACAAGGCATCGGCAGGCGAATGCGAGGACTCTTCTTCTGA

Related Sequences

XP_004840279.1 Protein

Cops6 PREDICTED: COP9 signalosome complex subunit 6 isoform X2 [Heterocephalus glaber]

Length: 323 aa      View alignments
>XP_004840279.1
MAAAAATNGTGGSSGMEVDTAVVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF