Details from NCBI annotation

Gene Symbol Lrch4
Gene Name leucine-rich repeats and calponin homology (CH) domain containing 4, transcript variant X1
Entrez Gene ID 101717141

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRCH4 ENSCPOG00000006102 (Guinea pig)

Gene Details

leucine-rich repeats and calponin homology (CH) domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005505, Guinea pig)

Protein Percentage 93.48%
CDS Percentage 92.49%
Ka/Ks Ratio 0.18766 (Ka = 0.0371, Ks = 0.1976)

LRCH4 ENSG00000077454 (Human)

Gene Details

leucine-rich repeats and calponin homology (CH) domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000309689, Human)

Protein Percentage 90.18%
CDS Percentage 87.93%
Ka/Ks Ratio 0.14105 (Ka = 0.0568, Ks = 0.4028)

Lrch4 ENSRNOG00000001402 (Rat)

Gene Details

leucine-rich repeats and calponin homology (CH) domain containing 4 (Lrch4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001899, Rat)

Protein Percentage 87.1%
CDS Percentage 85.78%
Ka/Ks Ratio 0.16896 (Ka = 0.0756, Ks = 0.4473)

Genome Location

Sequence Coding sequence

Length: 2055 bp    Location: 16491837..16503116   Strand: +
>XM_004840198.1
ATGGCGGCGGCAGTAGCGGCGCCACTCGCCGCCGGGGGAGAGGAGACGGCGGCCACGACTTCAGTGCCAGGGTCTCCGGGTCTGCCTGGGAGCCGTAGCGCAGAGCGAGCCCTAGAGGAGGCCGTGGCCACTGGGACCCTGAACTTGTCTAACCGGCGCTTGAAGCACTTCCCCAGGGGTGCGGCCCGCAGCTACGACCTGTCAGACATCACCCAGGCTGACCTGTCCCGGAACCGGTTTCCTGAGGTGCCTGAGGCAGCGTGCCACTTGGTGTCCCTAGAGGGCCTGAGCCTCTACCACAACTGCCTGAGATGCCTGAACCCAGCCTTGGGGAATCTCACAGCCCTAACCTACCTCAACCTCAGCCGAAACCAGCTGTCATCACTGCCACCCTACATCTGCCAGCTGCCCCTTCGAGTGCTTATTGTCAGCAACAACAAGCTGGGAGCCCTGCCTCCTGACATTGGCACTTTGGGAAGCCTACGACAGCTTGATGTGAGCAGCAATGAGTTGCAGTCCCTCCCCATGGAGCTGTGTAGCCTCCGTTCCCTGCGGGATCTCAATGTTAGGAGGAACCAGCTCAGCACTTTGCCTGATGAGCTGGGGGAACTTCCTCTGGTCCGCCTGGATTTCTCCTGTAACCGTGTCTCCCGCATCCCGGTCTCCTTCTGCCGCCTCAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCCCTGCAAAGCCCACCTGCCCAGATCTGCCTGAAGGGGAAACTTCATATCTTCAAGTACTTATCAACAGAGGCTGGGCGGCGTGGGGCTGCTCTGGGGGACCTGGCCCCCTCCCGCCCCCCGAGTTTCAGTCCCTGCCCAGCTGAGGATCTATTTCCGGGTCGTCGGTATGATGGTGGGTTGGACTCAGGCTTCCACAGTGTTGACAGTGGCAGCAAAAGGTGGTCTGGAAATGAGTCAACAGATGAGTTTTCAGAGCTGTCGTTTCGGATCTCAGAGCTGGCCCGGGAACCTCGAGGGCCCAGGGAACGGAGAGAGGATGGCTCTGCGGATGGAGACCCCGAGCAGATTGACTTCATCGACAGCCATGACCCTGGGGAGGATGAAGAGCGAGGTGTAGCTGAGGAGCAGCGGCCTCCTGAATTAAGCCCTGCGGCAGGGGACGGGGAGCGGGGACCCAGCAGCAGGCATGAGGAGCCAGCAGGGGAGGAACGGCGGCGCCCGGACAGCTTGCAGCTGTGGCAAGAACGGGAGCGGCAGCAGCAACAGCAACAGCAGAGTGGGGCTTGGGGGACCCCCCGGAAAGACAGTTTCTTGAAGCTGGGCATCAGGGCCACGGGGGGCAGAGCCACCCCATCCACTCAGGCCACCCACAATGGGCCTCCCAAGCCCAGTGCCACCCCACTGGGAGCTTCAGGGGCACAGGGAGCCCCCACACCTGCTCCCGCCTCCCAGGAGCCCCTTCCTGTAGTTGGACCAGTGATAGCACCTGCTCCCCGGCCACATGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCCGCTCCTCCTCTCAGAGTGGCTCAGCCCCTTCCTCACCTGACTGTGTCTTGAGACCTCGGCCTCCCAGCCAGGTTTCAGATGAGAAGGAATTAATGTCTCAACTGCGCCAGATCCTTGAGTCAAGGCTGCAGCGGCCCCTGCCCGAGGACCTGGCTGAGGCTCTGGCCAACGGGGTCATCCTCTGTCAGCTGGCCAACCAGCTCCGGCCCCGCTGTGTGCCCTTCATCCACGTGCCCTCTCCTGCTGTGCCAAAGCTCAGTGCCCTCAAGTCTCGGAAGAATGTGGAGAGTTTCTTAGAAGCCTGTCGAAAAATGGGGGTGCCCGAGGCTGACCTGTGCTCGCCCTCGGATCTCCTCCAGGGCACCGCCCAGGGGCTTCGGACCACACTAGAGGCTGTGAGGCGGGTGGGGGGCAAGGCCCCCCCACCTGCCTGGCCCCCCTCTGGTCTGGGTGGCTTCGTCTTCTTCTACATGGTCCTCATGCTGCTGCTCTATGTCGTCTACACTCGGCTCCTGGGCTCCTAG

Related Sequences

XP_004840255.1 Protein

Lrch4 PREDICTED: leucine-rich repeat and calponin homology domain-containing protein 4 isoform X1 [Heterocephalus glaber]

Length: 684 aa     
>XP_004840255.1
MAAAVAAPLAAGGEETAATTSVPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKHFPRGAARSYDLSDITQADLSRNRFPEVPEAACHLVSLEGLSLYHNCLRCLNPALGNLTALTYLNLSRNQLSSLPPYICQLPLRVLIVSNNKLGALPPDIGTLGSLRQLDVSSNELQSLPMELCSLRSLRDLNVRRNQLSTLPDELGELPLVRLDFSCNRVSRIPVSFCRLRHLQVILLDSNPLQSPPAQICLKGKLHIFKYLSTEAGRRGAALGDLAPSRPPSFSPCPAEDLFPGRRYDGGLDSGFHSVDSGSKRWSGNESTDEFSELSFRISELAREPRGPRERREDGSADGDPEQIDFIDSHDPGEDEERGVAEEQRPPELSPAAGDGERGPSSRHEEPAGEERRRPDSLQLWQERERQQQQQQQSGAWGTPRKDSFLKLGIRATGGRATPSTQATHNGPPKPSATPLGASGAQGAPTPAPASQEPLPVVGPVIAPAPRPHGSIQRPNSFLFRSSSQSGSAPSSPDCVLRPRPPSQVSDEKELMSQLRQILESRLQRPLPEDLAEALANGVILCQLANQLRPRCVPFIHVPSPAVPKLSALKSRKNVESFLEACRKMGVPEADLCSPSDLLQGTAQGLRTTLEAVRRVGGKAPPPAWPPSGLGGFVFFYMVLMLLLYVVYTRLLGS