Details from NCBI annotation

Gene Symbol Pcolce
Gene Name procollagen C-endopeptidase enhancer
Entrez Gene ID 101716440

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCOLCE ENSCPOG00000025385 (Guinea pig)

Gene Details

procollagen C-endopeptidase enhancer

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018419, Guinea pig)

Protein Percentage 89.69%
CDS Percentage 90.66%
Ka/Ks Ratio 0.18453 (Ka = 0.0513, Ks = 0.2779)

PCOLCE ENSG00000106333 (Human)

Gene Details

procollagen C-endopeptidase enhancer

External Links

Gene Match (Ensembl Protein ID: ENSP00000223061, Human)

Protein Percentage 85.52%
CDS Percentage 86.12%
Ka/Ks Ratio 0.16464 (Ka = 0.0785, Ks = 0.477)

Pcolce ENSMUSG00000029718 (Mouse)

Gene Details

procollagen C-endopeptidase enhancer protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031731, Mouse)

Protein Percentage 82.26%
CDS Percentage 82.05%
Ka/Ks Ratio 0.15955 (Ka = 0.1043, Ks = 0.6535)

Pcolce ENSRNOG00000025001 (Rat)

Gene Details

procollagen C-endopeptidase enhancer (Pcolce), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001887, Rat)

Protein Percentage 82.26%
CDS Percentage 81.48%
Ka/Ks Ratio 0.13849 (Ka = 0.1009, Ks = 0.7284)

Genome Location

Sequence Coding sequence

Length: 1425 bp    Location: 16480807..16476009   Strand: -
>XM_004840196.1
ATGCTGCCCGCTGCCCCAGCCTCCCTCCTGGGGCCCCTCCTCACAGCCTGGGCCCTGCTGCCTCTTGCCCAGGCCCAGACCCCCAACTACACCAGACCTGTGTTCCTGTGTGGAGGGGATGTGACAGGGGAGTCAGGTTACGTGGCAAGTGAGGGTTTCCCCAACCTCTACCCCCCCAGTAAGGAGTGCATCTGGACCATCACGGTCCCTGAGGCCCAGACTGTGTCCCTCTCCTTCCGAGTCTTTGACATGGAGCTGCACCCTGCCTGTCGTTACGATGCTCTGGAGGTCTTTGCTGGGCCTGGAACCTCGGGCAAGCGGCTGGGACGCTTCTGTGGGACCTTCCGGCCAGCACCCCTAGTCGCCCCTGGTAATCAGGTGACGCTGAGGATGACAGCAGACGAGGGCACAGGAGGACGAGGCTTCCTGCTGTGGTACAGCGGGCGGGCCACTTGGGGCAATGAGCACCAGTTTTGTGGGGGGCGGCTGGAGAAGGCACAGGGGACCCTCACCACGCCCAACTGGCCCGAGTCCGACTACCCCCCGGGCATCAACTGTAACTGGCACATCATCGCGCCCCTGGACCAGGTGATTCTGCTGACGTTCGGGAAGTTCGACCTGGAGCCCGATACCTACTGCCGCTACGACTCGGTCAGTGTGTTCAACGGAGCAATTAGCGACGACTCCAAGAGGCTGGGGAAGTTCTGCGGTGACACCGCCCCCGGCCCCATTTCCTCCGAAGGCAACGAGCTCCTGGTCCAGTTCGTCTCGGATCTCAGCGTCACCGCTGACGGCTTCTCCGCCTCCTACAAGACCCTGCCTCGGAACGCTGCTGACAAAGCGCCAGCCCCAAGCCCAGGAGGGGATGCCCAGCAGGGCACTCCCACTCTCGGCACCAACTCGGAGCCAGGAGCTGGACCCAAAGTCAAGCCACCCACCAAGCCCAAAGTTCAACCTGCAGAGAAGCCAGAAGCTTCACACAAGGCCCAGGGAATTCCAGTGAGCCCCAATGCCCCCACTGTCACCTGCCCAAAGCAGTACCGGAGAACAGGCACCTTGCAGAGCAACTTCTGTGCTAGTGATCTGGTGGTGACGGCAAAAGTGAAATCCATGGTTCGGGGGCCAGGCGAGGGCCTCACTGTCACTGTCAGTCTCATTGGTGTTTATAAAACTGGAGGACTGGACCTGCCCTCTCCACCCACTGGCACCTCCCTGAAATTTTACGTGCCCTGCAGGCAGTACCCGCCCATGAAGAAAGGAATCAGTTATCTGATGATGGGCCAGATGGATGAGAATAGAGGTCCCATCCTTCCACCAGAGAGCTTTGTGGTTGTCCACCGGCCTAACCAGGACCAGGTTCTCACCAACCTAAGCAACAGGAAATGCCTCTCCCAACCTGTTCTGGCTGTGGAATCCCAGGCCTGA

Related Sequences

XP_004840253.1 Protein

Pcolce PREDICTED: procollagen C-endopeptidase enhancer 1 [Heterocephalus glaber]

Length: 474 aa      View alignments
>XP_004840253.1
MLPAAPASLLGPLLTAWALLPLAQAQTPNYTRPVFLCGGDVTGESGYVASEGFPNLYPPSKECIWTITVPEAQTVSLSFRVFDMELHPACRYDALEVFAGPGTSGKRLGRFCGTFRPAPLVAPGNQVTLRMTADEGTGGRGFLLWYSGRATWGNEHQFCGGRLEKAQGTLTTPNWPESDYPPGINCNWHIIAPLDQVILLTFGKFDLEPDTYCRYDSVSVFNGAISDDSKRLGKFCGDTAPGPISSEGNELLVQFVSDLSVTADGFSASYKTLPRNAADKAPAPSPGGDAQQGTPTLGTNSEPGAGPKVKPPTKPKVQPAEKPEASHKAQGIPVSPNAPTVTCPKQYRRTGTLQSNFCASDLVVTAKVKSMVRGPGEGLTVTVSLIGVYKTGGLDLPSPPTGTSLKFYVPCRQYPPMKKGISYLMMGQMDENRGPILPPESFVVVHRPNQDQVLTNLSNRKCLSQPVLAVESQA