Sequence details NCBI ID: XM_004840176.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gigyf1
Gene Name GRB10 interacting GYF protein 1, transcript variant X3
Entrez Gene ID 101710640

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GIGYF1 ENSCPOG00000013604 (Guinea pig)

Gene Details

GRB10 interacting GYF protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012247, Guinea pig)

Protein Percentage 96.44%
CDS Percentage 93.5%
Ka/Ks Ratio 0.07621 (Ka = 0.0175, Ks = 0.2299)

GIGYF1 ENSG00000146830 (Human)

Gene Details

GRB10 interacting GYF protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000275732, Human)

Protein Percentage 93.38%
CDS Percentage 89.71%
Ka/Ks Ratio 0.06769 (Ka = 0.0314, Ks = 0.4635)

Gigyf1 ENSMUSG00000029714 (Mouse)

Gene Details

GRB10 interacting GYF protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031727, Mouse)

Protein Percentage 92.91%
CDS Percentage 88.63%
Ka/Ks Ratio 0.07125 (Ka = 0.0358, Ks = 0.5024)

Gigyf1 ENSRNOG00000001410 (Rat)

Gene Details

GRB10 interacting GYF protein 1 (Gigyf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001912, Rat)

Protein Percentage 92.79%
CDS Percentage 88.61%
Ka/Ks Ratio 0.07464 (Ka = 0.0364, Ks = 0.4884)

Genome Location

Sequence Coding sequence

Length: 3108 bp    Location: 16411564..16421070   Strand: +
Raw sequence   
>XM_004840176.1
ATGGCAGCAGAGACGCTCAACTTTGGGCCTGAGTGGCTGAGGGCCCTTTCCAGTGGAGGCAGTGTGGCCTCACCACCCCCCTCCCCTGCCATGCCCAAGTACAAGTTGGCTGACTACCGCTACGGGCGAGAGGAGATGCTGGCCCTCTACATCAAGGAGGACAAGGTCCCTGAAGAACTTCAGGACAAGGAGTTTGCTGCGGTTTTGCAGGAGGAGCCGCTGCAGCCACTGGCTCTGGAGCCTCTGACCGAGGAGGAGCAGAGGAACTTCTCCCTGTCAGTGAACAGCGTGGCTGTGCTGAGGTTGATGGGAAAAGGGGCTGCTCCCCCCCTGGCTGGCACCTCCCGTGGCAGGGGCAGCACGAGAAGCCGAGGCCGTGGCCGTGGTGACAGTTGCTTTTACCAAAGAAGCATTGAAGAAGGCGATGGAGCCTTTGGACGAAATCCCCGGGAGATCCAGCGAAGCCAGAGCTGGGATGACAGAGGTGAGAGGCGGTTTGAGAAGCCGGCAAGGAGGGATGGAGCGAGATCTGGGTTTGAGGAGGGAGGGGCTGGCCCAAGGAAGGAGCACACCCGCTCAGACAGTGAGAACTGGCGCTCACTTCGAGAGGAGCAGGAGGAGGAGGAAGAGGGCAGCTGGAGACTTGGGGCAGGACCCCGGCGAGATGGTGATCGCTGGCGCTCCACTAGTCCTGATGGCGGCCCCCGCTCTGCTGGCTGGCGGGAACATGGGGAGCGGCGTCGAAAGTTTGACTTTGATATGCGAGGGGAGCGAGGAGGGTGTGGTGAAGAGGAGGGGCGGGGTGGGGGAGGCAGCTCTCACCTCCGGAGGTGCCATGGGCCTGATGGCTTTGACGACGACAAGGACGGACTCCCAGAGTGGTGCCTCAATGATGAGGATGAAGAGATGGGCACCTTCGATGCCTCTGGGGCCTTCTTGCCTCTCAAGAAGGGCCCCAAGGACCCCATTCCTGAGGAGCAAGAGCTCGACTTCCAGGGCCTGGAGGAGGAGGAGGAAGAGCCTTCAGAAGGGCTGGATGAGGAGCGACCTGAGGCCGGTGGGAAGGAGCTGCCCCCACTGCCTCCTCCAGAGAAGTCCAGCTCTCCGTCCCCACTGCCCACCTTGGGCCCACTCTGGGGCACGAATGGGGAGAGTGACGAAGCTGTGGAGAAGGAACTTCCTGCAGCTGAAGATGACATGCGGAGAATCCAGCTGAGCCCTGGTGTTGGCTCACCCCCTGCGCCCCCTGGAGATCTGGAAGATGAAGAAGGTTTGAAGCATCTGCAGCAGGAGGCAGAGAAGCTGGTGGCCTCCCTGCAGGACAGCTCCCTGGAGGAGGAGCAGTTCACGGCCGCCATGCAGACCCAGGGCCTGCGCCACTCCACAGCTGCCACTGCCCTTCCCCTCAGCCATGGCGCTGCCCGCAAGTGGTTCTATAAGGACCCGCAGGGGGAGATCCAAGGCCCCTTCACAACCCAGGAAATGGCAGAATGGTTCCAGGCCGGCTACTTCTCCATGTCCCTGCTGGTGAAGCGGGGCTGTGATGAGGGCTTCCAGCCTCTGGGAGAAGTGATCAAGATGTGGGGCCGTGTGCCCTTTGCCCCGGGTCCCTCGCCACCCCCACTGCTGGGAAACATGGACCAGGAGCGGCTAAAGAAGCAGCAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTCCTTCAGCTGGTTGGCAGCCGCCAGCTCCCGCCGTGTTCGCTCCGGGAAAAGGCAGCTATGGGGGACCTGGCACCGCCGCAGCAGCAACAGCTTACTACATTTCTGCAGCAGCTCCAGGCTCTCAAACCTTCCAGAGGTGGGGACCAGAACCTGCTTCCGACAATTAGCCGGTCCATGTCGGTGCCGGATTCAAGCCCCCTCTGGGATGTACATACCTCAGCCTCATCACAGTCTGGTGGTGAGGCCAGTCTTTGGGACATACCAATTAACTCTTCGACTCAGGGTCCAATCCTAGAACAGCTCCAGCTGCAGCATAAATTCCAGGAGCGCAGAGAAGTGGAGCTCAGGGCGAAGCGGGAGGAGGAGGAGCGCAAGCGCCGAGAGGAAAAGCGCCGGCAGCAGCAGCAAGAAGAGCACAAGCGTCGCCAGGAGGAGGAGGAGCTCTTTCGGCGCAAGCAGGTGCGGCAGCAAGAGCTGCTCCTGAAGCTGTTGCAGCAGCAGCAGCAGCAACAGGCATCAGCCGCAGTCCCTGTGCCGCCTGCACCCAGCTCACCACCCCCACTCTGGGCTGGCCTGGCTAAGCAGGGCCTGTCCATGAAGACGCTGCTGGAGCTGCAGCTGGAGGGTGAGCGGCAGCTGCACAAGCCGCCTGTGCCCCGGGAGCCGCCAAGGGCCCAGGCCCCCAACCACCGCTCGCAGCTTGGGGGCCTGGGCGCTGCCCCCCTGAACCAATGGGTTTCTGAGGCCGGGCCACTGTGGGGCGGGCCTGACAAGAGTGGGGGCAGTGGCGGTGGCAGCCTGGGGCTCTGGGAGGATCCCCTCAAGAGCAGTGGAAGCCTGGCCCGTGGCCTCGGCCTGAAGAACAGTCGGAGCAGCCCGTCCCTCAGTGACTCCTACAGCCATCTGTCAGGTCGCCCTGTTCGCAAAAAGACAGAGGAAGAAGAGAAGCTATTGAAGCTGCTGCAGGGCATCCCCAGGCCCCAGGACGGCTTCACCCAGTGGTGTGAGCAGATGCTACACACCCTGAGCACCACGGGCAGCCTGGACGTGCCCATGGCTGTCGCAATCCTCAAGGAGGTGGAGTCCCCCTATGATGTCCATGATTATATCCGTTCCTGCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAGTTCCTGGAGCGGAGGGCTAAGCAGAAAGCCAGCCAGCAGCGGCAGCATCAGCAACAGGTGTGGCTGAGCAGTGCCTCCCTGCAGACAGCCTTTCAGGCCAACCACAGCACCAAACTTGGCCCTGGAGAGGGCACCAAGGCCAAGAGGCGGGCACTGATGCTGCACTCCGACCCCAGCATCTTGGGGTACTCCTTGCACGGACCTTCTGGTGAGATCGAGAGCGTGGATGACTACTGA

Related Sequences

XP_004840233.1 Protein

Gigyf1 PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 1 isoform X3 [Heterocephalus glaber]

Length: 1035 aa      View alignments
>XP_004840233.1
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYIKEDKVPEELQDKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAAPPLAGTSRGRGSTRSRGRGRGDSCFYQRSIEEGDGAFGRNPREIQRSQSWDDRGERRFEKPARRDGARSGFEEGGAGPRKEHTRSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSTSPDGGPRSAGWREHGERRRKFDFDMRGERGGCGEEEGRGGGGSSHLRRCHGPDGFDDDKDGLPEWCLNDEDEEMGTFDASGAFLPLKKGPKDPIPEEQELDFQGLEEEEEEPSEGLDEERPEAGGKELPPLPPPEKSSSPSPLPTLGPLWGTNGESDEAVEKELPAAEDDMRRIQLSPGVGSPPAPPGDLEDEEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQTQGLRHSTAATALPLSHGAARKWFYKDPQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNMDQERLKKQQELAAAALYQQLQHQQFLQLVGSRQLPPCSLREKAAMGDLAPPQQQQLTTFLQQLQALKPSRGGDQNLLPTISRSMSVPDSSPLWDVHTSASSQSGGEASLWDIPINSSTQGPILEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQEEHKRRQEEEELFRRKQVRQQELLLKLLQQQQQQQASAAVPVPPAPSSPPPLWAGLAKQGLSMKTLLELQLEGERQLHKPPVPREPPRAQAPNHRSQLGGLGAAPLNQWVSEAGPLWGGPDKSGGSGGGSLGLWEDPLKSSGSLARGLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGFTQWCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRAKQKASQQRQHQQQVWLSSASLQTAFQANHSTKLGPGEGTKAKRRALMLHSDPSILGYSLHGPSGEIESVDDY