Sequence details NCBI ID: XM_004840144.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Plod3
Gene Name procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
Entrez Gene ID 101701075

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLOD3 ENSCPOG00000002777 (Guinea pig)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002522, Guinea pig)

Protein Percentage 91.58%
CDS Percentage 90.26%
Ka/Ks Ratio 0.11529 (Ka = 0.0466, Ks = 0.4041)

PLOD3 ENSG00000106397 (Human)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000223127, Human)

Protein Percentage 91.18%
CDS Percentage 88.01%
Ka/Ks Ratio 0.05913 (Ka = 0.0415, Ks = 0.7013)

Plod3 ENSMUSG00000004846 (Mouse)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004968, Mouse)

Protein Percentage 90.54%
CDS Percentage 86.22%
Ka/Ks Ratio 0.06336 (Ka = 0.047, Ks = 0.7425)

Plod3 ENSRNOG00000001417 (Rat)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (Plod3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001921, Rat)

Protein Percentage 90.15%
CDS Percentage 86.01%
Ka/Ks Ratio 0.06679 (Ka = 0.0509, Ks = 0.7622)

Genome Location

Sequence Coding sequence

Length: 2226 bp    Location: 16074142..16082139   Strand: +
Raw sequence   
>XM_004840144.1
ATGGCCTCGGGACCCTGGCTTCTGCTCCAGCCCGGGCTTCTGCTCCTGCTCCTTCTGCCTCTGCCTCCAGCGACCTGTGCCTCCGAACAGCCCCGGGCCAGCAACCCGGTCAACCCAGAGAAACTGCTGGTGATCACCGTGGCCACAGCCGAGACAGAGGGATACCGCAGGTTTCTGCAGACTGCGGAATTCTTCAACTACACTGTGCGGACCCTGGGTCTGGGCAAGGAGTGGCGAGGTGGTGATGTGGCTCGGACAGTTGGTGGAGGACAGAAGGTCAGGTGGCTCAAGAAGGAAATGGAGAAATATGCAGACCAGGAGGACATGATCATCATGTTTGTAGACAGCTATGATGTGATTCTGGCCGGCAGCCCCACGGAGCTGCTGAAGAAGTTTGTCCAGAGCAGCAGCCGCCTGCTTTTCTCTGCAGAGGGCTTCTGCTGGCCCGACTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGGCACGGGGAAGCGCTTCCTCAACTCTGGTGGGTTCATTGGCTTCGCTCCCACCATCCACCAAATTGTCCACCAGTGGAAGTACAAGGATGATGACGATGACCAACTGTTCTATACGCGACTCTACCTGGATCCAGGGCTCAGGGAGAAATTCAGCCTTAATCTGGATCATAAATCCCGGATCTTCCAGAACCTCAATGGGGCTTTAGATGAGGTGGTTTTAAAGTTTGACCGGAATCGGGTGCGCATCCGGAACGTGGCCTACGACACACTCCCTGTTGTGGTCCATGGAAACGGCCCCACCAAGCTCCAGCTCAACTACCTGGGCAACTATGTCCCCAATGGCTGGACTCCCCAGGGAGGCTGCGGCTTCTGCAACCGGGACCAGAGGACACTCCCGGGGGGGCAGCCTCCCCCCCGGGTGCTGCTGGCCGTGTTTGTGGAACAGCCTACCCCGTTTCTGCCCCGCTTCCTGCAGCGCCTGCTGCTCCTGGACTACCCCCCGGACAGGGTCACCCTCTTCCTGCACAACAGTGAGGTATACCACGAGCCTCACATCGCAGACTCCTGGCCACAGCTCCAGGACCACTTCGAATCTGTGAAGCTGGTGGGGCCAGAGGAGGACCTGAGCCCAGGCGAGGCGAGGGACATGGCCATGGACACCTGTCGGCAGGACCCAGAGTGTGAATTCTACTTCAGCCTGGATGCTGATGCTGTCCTCACCAACCAGCAGACCCTGCGCATCCTCATCGAGCAGAACAGGAAGGTGATCGCGCCCATGTTGTCGCGCCATGGCAAGCTGTGGTCCAACTTCTGGGGGGCCCTGAGCCCTGACGAGTACTACGCCCGCTCCGAGGACTACGTGGAGCTGGTGCAACGGAAGCGGCTGGGCGTGTGGAACGTGCCCTACATATCCCAGGCCTACCTGATCCAAGGGGAGACCCTGAGGACGGAGCTGCCCCAGAGGGAGGTGTTCTCGAGCAGCGACATGGACCCAGACATGGCCTTCTGCATGAACCTGCGGGACAGGGGCATCTTCCTGCACCTCAGCAATCAGCAGGAGTTTGGCCGGCTCCTGGCCACGTCCCGGTATGACACGGACCACCTGCACCCCGACCTCTGGCAAATCTTTGACAACCCTGTGGACTGGAAGGAGCAGTACATTCACGAGAACTACAGCCAGGCCTTGGATGGGAAGGATCTAGTGGAGCAGCCCTGTCCAGATGTGTACTGGTTCCCACTGCTGTCAGAACAGATGTGTGATGAGCTGGTGGAGGAAATGGAGAACTACGGCCAGTGGTCAGGCGGTCGGCATGAGGACTCGCGGCTGGCTGGGGGGTACGAGAACGTGCCCACTGTGGACATCCACATGAAGCAGGTGGGCTATGAGGACCAGTGGCTGCAGCTTCTGAGGACATACGTGGGGCCCATGACGGAGCACCTGTTTCCTGGCTACCACACCAAGACCAGGGCAGTGATGAACTTTGTGGTCCGCTACCGGCCAGACGAACAACCCTCACTGCGGCCACATCACGACTCGTCTACCTTCACCCTCAACGTGGCCCTCAACCACAAGGGCCTGGATTATGAGGGAGGGGGCTGCCGTTTCCTGCGCTACAACTGCATCATCTCGTCCCCGAGGAAGGGCTGGGGGCTCCTGCACCCCGGCCGCCTCACCCACTACCACGAGGGGCTGCCCACAACTCGGGGGACTCGCTACATCATGGTGTCCTTTGTGGATCCCTGA

Related Sequences

XP_004840201.1 Protein

Plod3 PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [Heterocephalus glaber]

Length: 741 aa      View alignments
>XP_004840201.1
MASGPWLLLQPGLLLLLLLPLPPATCASEQPRASNPVNPEKLLVITVATAETEGYRRFLQTAEFFNYTVRTLGLGKEWRGGDVARTVGGGQKVRWLKKEMEKYADQEDMIIMFVDSYDVILAGSPTELLKKFVQSSSRLLFSAEGFCWPDWGLAEQYPEVGTGKRFLNSGGFIGFAPTIHQIVHQWKYKDDDDDQLFYTRLYLDPGLREKFSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPQGGCGFCNRDQRTLPGGQPPPRVLLAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFLHNSEVYHEPHIADSWPQLQDHFESVKLVGPEEDLSPGEARDMAMDTCRQDPECEFYFSLDADAVLTNQQTLRILIEQNRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRLGVWNVPYISQAYLIQGETLRTELPQREVFSSSDMDPDMAFCMNLRDRGIFLHLSNQQEFGRLLATSRYDTDHLHPDLWQIFDNPVDWKEQYIHENYSQALDGKDLVEQPCPDVYWFPLLSEQMCDELVEEMENYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTEHLFPGYHTKTRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYNCIISSPRKGWGLLHPGRLTHYHEGLPTTRGTRYIMVSFVDP