Details from NCBI annotation

Gene Symbol Cux1
Gene Name cut-like homeobox 1, transcript variant X7
Entrez Gene ID 101725475

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CUX1 ENSCPOG00000008564 (Guinea pig)

Gene Details

cut-like homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007696, Guinea pig)

Protein Percentage 96.61%
CDS Percentage 93.37%
Ka/Ks Ratio 0.08211 (Ka = 0.0183, Ks = 0.2225)

CUX1 ENSG00000257923 (Human)

Gene Details

cut-like homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000353401, Human)

Protein Percentage 91.63%
CDS Percentage 87.11%
Ka/Ks Ratio 0.07926 (Ka = 0.0467, Ks = 0.5894)

Cux1 ENSMUSG00000029705 (Mouse)

Gene Details

cut-like homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004097, Mouse)

Protein Percentage 89.42%
CDS Percentage 85.47%
Ka/Ks Ratio 0.09875 (Ka = 0.0597, Ks = 0.6041)

Cux1 ENSRNOG00000001424 (Rat)

Gene Details

Homeobox protein cut-like 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001928, Rat)

Protein Percentage 89.47%
CDS Percentage 84.93%
Ka/Ks Ratio 0.09382 (Ka = 0.0603, Ks = 0.6431)

Genome Location

Sequence Coding sequence

Length: 4302 bp    Location: 15664095..15312096   Strand: -
>XM_004840128.1
ATGGCGGCCAATGTGGGATCGATGTTTCAATATTGGAAGCGCTTTGATTTACAACAGCTGCAGAGAGAACTCGATGCTACTGCAACAGTTTTGGCAAACCGGCAAGATGAGAGTGAGCAGTCCAGAAAACGGCTCATTGAGCAGAGCCGAGAGTTCAAGAAGAACACTCCAGAGGATTTGCGCAAGCAGGTAGCACCACTGCTGAAGAGCTTCCAGGGGGAGATTGATGCATTGAGTAAAAGAAGCAAAGAAGCCGAGGCAGCCTTCTTGAATGTCTACAAGAGATTAATTGATGTTCCAGACCCAGTGCCAGCCCTGGATCTGGGGCAGCAACTGCAGCTCAAGGTGCAGCGCCTACACGACATCGAGACAGAAAACCAGAAACTTAGGGAAACTCTTGAAGAATACAACAAGGAATTTGCTGAAGTGAAAAATCAAGAGGTTACGATAAAAGCACTTAAAGAGAAAATCCGAGAATATGAACAGACTCTGAAGAGCCAAGCCGAGACAATTGCTCTCGAAAAAGAACAAAAGTTGCAGAATGATTTTGCAGAGAAAGAGAGAAAGCTACAGGAGACACAGATGTCAACCACCTCAAAGCTGGAAGAGGCCGAGCATAAACTTCATTCTCTGCAAACAGCCCTGGAAAAAACTCGAACAGAATTATTTGACCTGAAAACCAAATATGATGAAGAAACTACTGCAAAGGCCGACGAGATTGAAATGATCATGACGGACCTTGAAAGAGCAAACCAGAGGGCAGAGGTGGCACAGAGAGAGGCAGAGACCTTAAGGGAGCAGCTCTCGTCAGCCAACCACTCCCTCCAGCTGGCCTCACAGATCCAGAAGGCGCCGGATGTGGAGCAGGCCATAGAGGTGCTGACCCGCTCCAGCCTGGAAGTTGAGTTGGCCGCCAAGGAGCGGGAGATTGCCCAGCTGGTGGAGGACGTGCAGAGGCTCCAGGCCAGCCTCACAAAGCTACGAGAGAACTCAGCCAGCCAGATCTCCCAGCTCGAACAGCAGCTGAGCACCAAGAACAGCACACTCAAACAACTGGAAGAAAAACTCAAAGGCCAGGCTGACTATGAAGAGGTGAAGAAAGAGCTGAACATCTTGAAGTCCATGGAGTTTGCACCATCCGAAGGAGCTGGGACACAGGAAGCAGCCAAGCCCCTGGAGGTACTACTACTGGAGAAGAACCGCTCACTGCAGTCTGAGAATGCTGCACTGCGCATCTCCAACAGCGACCTGAGCGGTCCCTACAGCACAAATTCCATATCTTCCCCAACTCCATTACAACAAAGCCCAGATGTAAATGGCATGGCCCCATCTCCCAGTCAGTCCGAAAGTGCTGGGAGCGTCTCCGAGGGCGAGGAGATAGACACTGCAGAAATCGCCCGGCAGGTCAAAGAGCAGCTGATCAAGCACAATATTGGACAGCGCATTTTCGGACATTATGTCTTGGGACTGTCACAAGGGTCTGTGAGCGAGATCCTGGCCCGGCCAAAGCCCTGGAATAAACTGACTGTCCGAGGTAAAGAGCCATTCCACAAGATGAAGCAGTTCCTCTCCGACGAGCAGAACATCTTGGCCCTGCGCAGCATCCAAGGCAGACAAAGAGAGAATCCAGGCCAGAGCCTGAACAGACTATTTCAGGAAGTACCGAAACGAAGAAATGGGTCTGAAGGTAACATCACCACACGGATCCGAGCCTCAGAGACGGGTTCTGATGAAGCAATCAAGTCCATCCTGGAACAAGCCAAGAGGGAGCTCCAAGTTCAGAAAACTGCAGAGCCAGCCCAGCCATCTTCCACATCCAGCCCTGGGAACTCTGATGATGCCATCCGCTCCATCCTGCAGCAAGCCCGTCGGGAAATGGAAGCCCAGCAGGCTGCCCTTGAACCTGCCTTAAAACCAGCCCCACTGTCCCAGCCTGACGTCACCCTCCTGGCCCCCAAGCTCCTGTCTGCCTCACCCATGCCCACCGTGTCCAGTTACTCTCCTCTCACTGTCTCCCTGAAGAAAACACCGTCAGCCCCCGAAGCCACTGCCTCATCCCTGCCCAACACCCCAGCCCTCAAAAAAGAGGCCCAGGACGTGCCTGTCCTGGACCCACAGGGCATGGCAGATGCTGCACAAGGGGTCTTGAGGCACGTGAAGAGTGAGCTGGGCCGTGGGGGTGGGTGGAAGGACCACTGGTGGAGTCCTGTGCAGCCCGAAAGGAGAAACCCCACCTCCTCTGAAGAGACAAAGGGTGAAGAGGCCACAGGTGGAAAAGAAAAGGGCAGTGGTGCCAGCCAGCCTCGGGCCGAGCGCAGCCAGCTTCAGGGACCCTCGTCAGAGTACTGGAAAGAGTGGCCCAACGCTGAATCTCCGTATTCCCAGAGCTCAGAACTGAGCCTGACTGGAGCTAGCCGCAGCGAGACACCCCAGAACAGCCCTCTGCCTTCCTCCCCGATCGTGTCCATGACGAAGCCCACCAAGCCCTCCGTCCCTCCACTGACCCCCGAACAGTATGAGATCTACATGTACCAAGAGGTGGACACCATCGAGCTCACCCGACAGGTTAAAGAGAAGCTGGCTAAGAACGGTATCTGCCAGAGGATCTTCGGGGAGAAGGTGCTGGGCCTTTCCCAGGGTAGCGTCAGTGACATGCTGTCGCGGCCGAAGCCATGGAGCAAGCTAACCCAGAAAGGCCGAGAGCCCTTCATCAGGATGCAGCTCTGGCTAAATGGCGAGCTGGGCCAGGGAGTGCTGCCTGTCCAAGGACAACCACAAGGGCCAGTCCTCCATTCAGTGACGTCGCTGCAGGACCCTTTACAGCAGGGCTGTGTGAGCTCAGAAAGCACTCCAAAGACCTCTGCCAGCTGCAGCCCTGCCCCCGAGTCCCCAATGAGTTCCAGCGAATCTGTGAAGAGTTTGACTGAGCTGGTCCAGCAGCCCTGTCCCCCCATCGAGACCAGTAAGGATGGCAAGCCACCAGAACCCAGCGACCCGCCAACTTTGGACTCCCAACCCACAACCCCACTGCCTCTCTCTGGACACTCAGCCCTCAGCATCCAAGAACTTGTAGCCATGTCTCCAGAGCTGGACACCTATGGCATAACAAAGAGGGTCAAGGAGGTGCTGACAGACAACAACCTTGGTCAGCGCTTGTTTGGGGAGACCATCCTAGGGCTCACCCAAGGCTCTGTGTCCGACCTCCTTGCCCGCCCAAAGCCCTGGCATAAGCTCAGCCTGAAGGGACGGGAGCCTTTTGTCCGGATGCAAGTGTGGCTCAATGACCCCAACAATGTGGAGAAGCTGATGGACATGAAGCGGATGGAGAAGAAAGCCTATATGAAGCGGAGACACAGCTCAGTCAGTGATAGCCAGCCCTGCGAGCCCCCACCTGTGGGCATTGACTACAGCCAGGGAGCCAGCCCGCAGCCACAACACCAGCTAAAGAAACCCCGCGTGGTGCTGGCCCCCGAGGAGAAGGAAGCCCTGAAACGAGCCTATCAGCAGAAGCCATACCCATCCCCCAAAACCATCGAGGAGCTCGCCACCCAGCTCAACTTGAAGACCAGCACCGTCATCAACTGGTTCCATAACTACAGGTCTCGGATCCGCAGGGAACTGTTCATTGAGGAAATTCAGGCCGGAAGCCAGGGCCAGGCTGGCGCCAGCGACTCGCCATCAGCCCGGAGCGGCCGCCCTGCACCCAGCTCGGAGGGCGACAGCTGCGACGGAGTGGAGGCGGCTGAGGGCCCAGGCGCCACCGTCACCGCCACTGCCGACGCGGAGGAGCCGGGCGGCCCCACAGCCGCCACCAAGTCTCAGGGAGGGCCAGGCACAGCGGAGCGCGAAGAAAGGCCACCACCGCCATCGGGGACCCCGGGGACGCCCGTCCCAGACGACGCCGCCGCTGCCGAGGACGCGGGCCGGGCCGGGCCGCCACCGCCCCCGCCCCTCGAGGGCCCCGCCGAGCTCCCGGCGCCCGTGCCAAACCCCGCCACTGCTGCCGCCGCCGCCACCGGGGAGGACGCCGCTACCTCAGCTGCCGCCACCAGGGGTCCTGCCTCGCCGGGCACGAGTGCGGGCACGGGCACGAGCACAGGCACGAGCGCGGGAGGGACCGCACCCGCGGCTGCGCGCAGGCCCCGCTCGCTGCAGAGCCTCTTCGGCCTGCCTGAGGCGGCGAGCACCCGGGACCCGCACGACAACCCCGTGCGCAAGAAGAAGGCGGCCAATTTGAACAGCATCATCCACCGCCTGGAGAAGGCCGCCAGCCGCGAGGAGCCCATCGAATGGGAGTTCTGA

Related Sequences

XP_004840185.1 Protein

Cux1 PREDICTED: homeobox protein cut-like 1 isoform X7 [Heterocephalus glaber]

Length: 1433 aa      View alignments
>XP_004840185.1
MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKSQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLHSLQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSTKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQEAAKPLEVLLLEKNRSLQSENAALRISNSDLSGPYSTNSISSPTPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTSSPGNSDDAIRSILQQARREMEAQQAALEPALKPAPLSQPDVTLLAPKLLSASPMPTVSSYSPLTVSLKKTPSAPEATASSLPNTPALKKEAQDVPVLDPQGMADAAQGVLRHVKSELGRGGGWKDHWWSPVQPERRNPTSSEETKGEEATGGKEKGSGASQPRAERSQLQGPSSEYWKEWPNAESPYSQSSELSLTGASRSETPQNSPLPSSPIVSMTKPTKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQPQGPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIETSKDGKPPEPSDPPTLDSQPTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQVWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPPVGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRPAPSSEGDSCDGVEAAEGPGATVTATADAEEPGGPTAATKSQGGPGTAEREERPPPPSGTPGTPVPDDAAAAEDAGRAGPPPPPPLEGPAELPAPVPNPATAAAAATGEDAATSAAATRGPASPGTSAGTGTSTGTSAGGTAPAAARRPRSLQSLFGLPEAASTRDPHDNPVRKKKAANLNSIIHRLEKAASREEPIEWEF