Details from NCBI annotation

Gene Symbol Upk3b
Gene Name uroplakin 3B
Entrez Gene ID 101720237

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UPK3B ENSCPOG00000024192 (Guinea pig)

Gene Details

uroplakin 3B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014341, Guinea pig)

Protein Percentage 88.56%
CDS Percentage 88.56%
Ka/Ks Ratio 0.15889 (Ka = 0.0644, Ks = 0.4051)

UPK3B ENSG00000243566 (Human)

Gene Details

uroplakin 3B

External Links

Gene Match (Ensembl Protein ID: ENSP00000441602, Human)

Protein Percentage 50.38%
CDS Percentage 61.11%
Ka/Ks Ratio 0.27671 (Ka = 0.4523, Ks = 1.6345)

Upk3b ENSMUSG00000042985 (Mouse)

Gene Details

uroplakin 3B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062312, Mouse)

Protein Percentage 80.0%
CDS Percentage 79.39%
Ka/Ks Ratio 0.13781 (Ka = 0.1264, Ks = 0.9173)

Upk3b ENSRNOG00000023686 (Rat)

Gene Details

Protein Upk3b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034111, Rat)

Protein Percentage 80.36%
CDS Percentage 79.64%
Ka/Ks Ratio 0.1337 (Ka = 0.1239, Ks = 0.927)

Genome Location

Sequence Coding sequence

Length: 828 bp    Location: 15101170..15106141   Strand: +
>XM_004840108.1
ATGGGGCTCCCCTGGAGGCAGCCTCACCCTGGGCTGCTGCTCCTCTGGGTGCTACCGTGGCTGCAGCCCAACTTGTGCCTGGAGCTGGTCCCCTACACTCCGCAGATCACAGCCTGGGATCTGGAAGGGAGGGTCACGGCCACCACATTCTCCCTGGAACAGCCTACCTGTATCTTCGATGGGCATGCCGGTGCCAACGACACCATCTGGCTGGTGGTGACCTTCAGCAATGCCTCCAGGGACTTCCAGAACCCACAGACCTTGGCCGAGATCCCCACCTCCCCACAGCTGCTGACCGATGGCCACTACATGACACTGCCCTTGTCCCCGGACCAGCTGCCCTGTGAGGACCTGCGGGGTGGCAGTGGAGGTGTCCGCTTGCTTCGAGTGGGCAATGACTTCAGCTGCCAACAGCAGCCCTACTGCAATGCTCCCCTCCCTGGCCCGGGACCCTACAGTGTGAAGTTCCTCGTGATGGACGTCAGTGGCTCTCCCAAGGCTGAGACCAAGTGGTCAGACCCCATTAGGCTTCGCCAAGGGGAGGCCCCGGGCTCCATTGACACGTGGCCGGGGCGGCGGAGTGGCTGCATGATCGTCATCACCTCCATCCTCGCCTCTCTGGCTGGCCTCCTGCTCCTGGCTTTCCTGGCAGCTTCCACGTTGCGCTTCTCCAGCCTATGGTGGCCTGAGGAGGTCCCCGAGCATCTTCGGATCGGCTCCTTCATGGGGAAGCGCTACATGACCCACCACATCCCGCCCAGTGAGGCCACCACACTGCCTGTGGGATGTGAGCAGGGCCTGGACCCCCTCCCTAGCCTCAGCCCTTAG

Related Sequences

XP_004840165.1 Protein

Upk3b PREDICTED: uroplakin-3b [Heterocephalus glaber]

Length: 275 aa      View alignments
>XP_004840165.1
MGLPWRQPHPGLLLLWVLPWLQPNLCLELVPYTPQITAWDLEGRVTATTFSLEQPTCIFDGHAGANDTIWLVVTFSNASRDFQNPQTLAEIPTSPQLLTDGHYMTLPLSPDQLPCEDLRGGSGGVRLLRVGNDFSCQQQPYCNAPLPGPGPYSVKFLVMDVSGSPKAETKWSDPIRLRQGEAPGSIDTWPGRRSGCMIVITSILASLAGLLLLAFLAASTLRFSSLWWPEEVPEHLRIGSFMGKRYMTHHIPPSEATTLPVGCEQGLDPLPSLSP