Details from NCBI annotation

Gene Symbol Gtf2ird1
Gene Name GTF2I repeat domain containing 1, transcript variant X2
Entrez Gene ID 101724499

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF2IRD1 ENSCPOG00000004421 (Guinea pig)

Gene Details

GTF2I repeat domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003989, Guinea pig)

Protein Percentage 93.45%
CDS Percentage 91.08%
Ka/Ks Ratio 0.06248 (Ka = 0.0289, Ks = 0.4631)

GTF2IRD1 ENSG00000006704 (Human)

Gene Details

GTF2I repeat domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000397566, Human)

Protein Percentage 92.05%
CDS Percentage 87.91%
Ka/Ks Ratio 0.0492 (Ka = 0.0375, Ks = 0.762)

Gtf2ird1 ENSMUSG00000023079 (Mouse)

Gene Details

general transcription factor II I repeat domain-containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000098217, Mouse)

Protein Percentage 83.26%
CDS Percentage 81.17%
Ka/Ks Ratio 0.08489 (Ka = 0.0907, Ks = 1.0684)

Genome Location

Sequence Coding sequence

Length: 2883 bp    Location: 13652070..13581752   Strand: -
>XM_004840026.1
ATGGCCTTGCTGGGGAAGCGCTGTGACCTCCCCGCCAACGGCTGCGGGCCTGACCGCTGGAACTCAGCCTTCACCCGCAAAGACGAGATCATCACCAGCCTGCTGTCTGCCTTAGACTCCATGTGCTCCGCGCTCTCCAAGCTAAATGCCGAGGTGGCCTGCATCGCCGTGCATGATGACAGCGCCTTCGTGGTGGGGACTGCCAAGGGCCGGATGTTCCTGAGCGCCAGGAAGGAGCTGCAGTCGGACTTCCTCAGGTTCTGCCGAGGGCCCTTGTGGAAGGATTCGGAGGCAGAGCACCCCAAGAAGGTGCTGCGGGGCGAGGGCGGCAGCCGGAGCGCCCCCCGGTCGTCCCTGGAGCGCGGCTCGGACGTGTACCTGCTGCGCAAGATGGTGGAGGAGGTGTTCGATGTCCTCTATAGTGAGGCCCTGGGCACGGCCAGTGTGGTGCCTTTGCCCTATGAGCGGCTGCAGCGGGAGCCGGGGCTTCTGGCCGTGCAGGGGCTGCCCGAGGGGCTGGCCTTCCGCCGGCCAGCTGAGTACGACCCCAAGGCACTCATGGCCATCCTGGAGCACAGCCATCGCATCCGCTTCAAGCTCAAGAGGCCTCTGGACGATGGTGGGCGGGACTCCAAGGCCCTAGTGGAGCTGAATGGCGTCTCCCTGCTGCCCAAGGCATCCCGGGACTGCGGCCTGCATGGCCAGGCCCCCAAGGTCCCCCCCCAGGACCTGCCCCCCACCGCTGCCTCCTCCTCCATGGCCAGCTTCCTCTACAGCCCTGGCCTGGCTGGCCATGCCGTCATCCGCGAGCTCAAGCAGGAGGCGCCAGCCTGTCCCCTCGCCCCCAGCGACCTGGGCCTGGGCCTTCCGCTGCCCGAGCCGAAGGTGCCTGGTGCCCAGGACCTCTCTGACTGCTGTGGACAGAAGCCCACAGGGCCCACTGGGCCTCTCATCCAGAATGTCCATGCCTCCAAGCGTATTCTGTTCTCCATCGTCCATGACAAGTCAGAGAAGTGGGACGCCTTCATCAAGGACACGGAGGACATCAACACGCTTCGGGAATGCGTGCAGATCCTGTTCAACAGCAGATATGCGGAAGCCCTAGGCCTGGACCACATGGTCCCCGTCCCCTACAGGAAGATCGCCTGCGACCCAGAGGCCGTGCAGATCGTGGGCATCCCAGACAAGATCCCCTTCAAGCGGCCCTGCACTTATGGGGTCCCCAAGCTGAAGCGCATCCTGGAGGAGCGACACAGCATCCACTTTGTCATTAAGAGGATGTTTGATGAGCGGATTTTCACAGGGAACAAGTTTACCAAAGACTCCACGAAGCTGGAGCCGGCCAGCCCGCCCGAGGACCCCTCTGCGGAGGCCTCCAGGGCCGGCCTCCTTGACCTGGCCGCCACCGCCTGGTCAGACAAGGGCAGCGTCTCCGAAGACTGTGGGGCAGGAACCTCCGGGGAGCTGGGCATGCTGCGGCCCATCAAAATTGAGCCTGAGGACCTGGACATCATTCAGGTCACCGTCCCAGACCCTTCGCCAGCCTCTGAGGATATGACAGACTCGCTGCCGGATCCCCTGCCCTCCGAGGACTCTGGCTACGGCATGGAGGTGGCGGCTGACAAAGGGCCCAGCGAGGACCCCCGGCCGGAGGAGCGGCCCGTGGAGGACAGCCACGGCGACGTAATCCGGCCGCTGCGGAAGCAGGTGGAGCTGCTCTTCAACACGCGATACGCCGAGGCCATCGGCATCTCGGAGCCAGTCAAGGTGCCCTACTCCAAGTTCCTGATGCACCCTGAGGAGCTGTTCGTGGTGGGGCTGCCTGAAGGCATCTCCCTGCGCCGGCCCAACTGCTTCGGCATCGCCAAGCTCCGAAAGATTCTGGAGGCCAGCGACAGCATCCAGTTTGTCATCAAGAGGCCAGAGCTGCTCACCGAGGGTGTCAAGGAGCCAGTCGCTGACAGCCAAGAGAGGGATTCCGGGGACCCCCTTGTGGACGAGAGCCTGAGGAGACAGGGCTTCCCAGAAAATTATGATGCCAGACTCTCGAGGATCGACATCGCCAACACTCTGCGGGAGCAGGTCCAGGACCTGTTCAATAAGAAATACGGGGAAGCTTTGGGTATCAAGTACCCAGTTCAGGTGCCCTACAAGCGGATCAAGAGCAACCCCGGCTCAGTGATCATTGAGGGGCTGCCCCCAGGAATCCCCTTCCGGAAGCCGTGCACTTTCGGCTCCCAGAACCTGGAGCGGATCCTTGCTGTGGCTGACAAGATCAAGTTCACGGTCACCAGGCCATTCCAAGGACTCATCCCGAAGCCTGATGAGGATGACGCCAACAGGCTGGGGGAGAAAGTGATCCTCCGGGAGCAGGTGAAGGAGCTCTTCAATGAGAAATACGGTGAGGCCCTGGGCCTGAACCGGCCCGTGCTGGTCCCTTACAAGCTGATTCGAGACAGCCCCGACGCCGTGGAGGTCACGGGCCTGCCAGACGACATCCCTTTCCGGAACCCCAACACCTATGACATCCACCGGCTGGAGAAGATCTTGAAGGCGCGGGAGCACATGCGCATAGTCATCATCAACCAGCTCCAACCTTGTACAGAAATCTCCACTGATGCCAAGGTGCCAGCCAGAGACAGCGTTCCCAAGCGCAAGAGAAAGAGGGCCTCCGAAGGCAACTCCGTGTCTTCCTCCTCCTCGTCTTCTTCCTCTTCATCCTCCAACCCGGAGTCCGTGGCGTCCACCAATCAGATTTCCCTCGTGCAGTGGCCGATGTACATGGTGGACTACACCGGCCTCAATGTGCAGCTGCCGGGAGCCCTCAATTACTGGACCTCAGCGCCCAACCAGGACCTCACAGAAAGACTAAAGGAAGTATAA

Related Sequences

XP_004840083.1 Protein

Gtf2ird1 PREDICTED: general transcription factor II-I repeat domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 960 aa     
>XP_004840083.1
MALLGKRCDLPANGCGPDRWNSAFTRKDEIITSLLSALDSMCSALSKLNAEVACIAVHDDSAFVVGTAKGRMFLSARKELQSDFLRFCRGPLWKDSEAEHPKKVLRGEGGSRSAPRSSLERGSDVYLLRKMVEEVFDVLYSEALGTASVVPLPYERLQREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLDDGGRDSKALVELNGVSLLPKASRDCGLHGQAPKVPPQDLPPTAASSSMASFLYSPGLAGHAVIRELKQEAPACPLAPSDLGLGLPLPEPKVPGAQDLSDCCGQKPTGPTGPLIQNVHASKRILFSIVHDKSEKWDAFIKDTEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVQIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFVIKRMFDERIFTGNKFTKDSTKLEPASPPEDPSAEASRAGLLDLAATAWSDKGSVSEDCGAGTSGELGMLRPIKIEPEDLDIIQVTVPDPSPASEDMTDSLPDPLPSEDSGYGMEVAADKGPSEDPRPEERPVEDSHGDVIRPLRKQVELLFNTRYAEAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASDSIQFVIKRPELLTEGVKEPVADSQERDSGDPLVDESLRRQGFPENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHMRIVIINQLQPCTEISTDAKVPARDSVPKRKRKRASEGNSVSSSSSSSSSSSSNPESVASTNQISLVQWPMYMVDYTGLNVQLPGALNYWTSAPNQDLTERLKEV