Sequence details NCBI ID: XM_004840024.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gtf2i
Gene Name general transcription factor IIi, transcript variant X10
Entrez Gene ID 101722019

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF2I ENSCPOG00000004071 (Guinea pig)

Gene Details

general transcription factor IIi

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003673, Guinea pig)

Protein Percentage 97.7%
CDS Percentage 94.22%
Ka/Ks Ratio 0.05058 (Ka = 0.0109, Ks = 0.2147)

GTF2I ENSG00000077809 (Human)

Gene Details

general transcription factor IIi

External Links

Gene Match (Ensembl Protein ID: ENSP00000322542, Human)

Protein Percentage 98.5%
CDS Percentage 92.12%
Ka/Ks Ratio 0.02126 (Ka = 0.0078, Ks = 0.3663)

Gtf2i ENSMUSG00000060261 (Mouse)

Gene Details

general transcription factor II I

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049625, Mouse)

Protein Percentage 97.19%
CDS Percentage 87.86%
Ka/Ks Ratio 0.02106 (Ka = 0.0135, Ks = 0.6428)

Gtf2i ENSRNOG00000001479 (Rat)

Gene Details

general transcription factor II I (Gtf2i), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002020, Rat)

Protein Percentage 97.44%
CDS Percentage 86.84%
Ka/Ks Ratio 0.01609 (Ka = 0.012, Ks = 0.743)

Genome Location

Sequence Coding sequence

Length: 2997 bp    Location: 13519122..13446832   Strand: -
Raw sequence   
>XM_004840024.1
ATGGCCCAAGTTGCAATGTCGACGCTGCCCGTTGAAGATGAGGAGTCCTCTGAGAGTAGGATGGTGGTGACCTTCCTCATGTCTGCCCTCGAGTCCATGTGCAAAGAACTGGCGAAGTCCAAGGCAGAAGTGGCCTGCATTGCAGTGTATGAAACAGATGTGTTTGTTGTTGGAACCGAAAGAGGACGTGCTTTTGTCAATACCAGAAAAGATTTTCAAAAAGATTTTGTAAAATACTGTGTTGAAGAAGAAGAAAAAGCCGCAGAAATGCATAAAATGAAATCTACAGCCCAGGCAAATCGGATGAGTGTGGATGCAGTGGAAATTGAAACACTTAGAAAAACCGTTGAGGACTATTTCTGCTTTTGCTATGGGAAAGCTTTAGGCAAGTCCACAGTGGTGCCTGTTCCATATGAGAAAATGCTGCGGGACCAGTCGGCTGTGGTAGTGCAGGGGCTTCCGGAAGGAGTTGCCTTTAAACACCCTGAAAATTATGATCTTGCCACCCTGAAGTGGATTTTGGATAACAAAGCAGGGATTTCATTTATCATTAAGAGACCTTTCCTAGAGCCAAAGAAACACCTAGGTGGTCGTGTAATGGTAACAGATGCTGACAGGTCAATACTGTCTCCAGGTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAACCCACAGAAGATTCTGGCATTTCCCTGGAAATGGCAGCTGTGACAGTAAAGGAGGAATCAGAAGATCCTGATTACTATCAATATAACATTCAAGCAGGCCCTTCTGAAACTGATGATGTTGATGAAAAACTCCCTCTTTCGAAGTCTTTACAAGGAAGTCATCATTCTTCAGAGGGCAACGAAGGAACAGAAATGGAAGTTCCAGCGGAAGATTCTACTCAACATGTCCCTTCAGAAACAAGTGAGGACCCTGAAGTTGAGGTGACTATTGAAGATGATGATTATTCTCCACCTACCAAGAGACCAAAGAGTAATGAGGCACCGCCGCCCCCAGTCCCAGAGCCTGCAAATGCTGGGAAGCGGAAAGTGCGGGAGTTCAACTTTGAAAAATGGAACGCTCGAATTACTGATCTACGTAAACAAGTTGAAGAGTTGTTTGAAAGAAAATATGCTCAAGCTATAAAAGCCAAAGGTCCGGTGACGATCCCATACCCTCTTTTCCAGTCTCATGTGGAAGATCTTTATGTTGAAGGACTTCCCGAAGGAATTCCTTTTAGAAGGCCATCTACATACGGAATTCCTCGCCTTGAGAGAATATTGCTTGCAAAGGAAAGGATTCGTTTTGTGATTAAGAAACATGAGCTTCTGAACTCAACACGTGAAGATTTACAGCTTGACAAACCAGCTTCAGGAGTAAAGGAAGAGTGGTATGCCAGAATCACTAAATTACGAAAGATGGTAGATCAACTTTTCTGCAAAAAATTTGCTGAGGCCTTGGGGAGCACAGAAGCCAAGGCTGTACCGTACCAAAAATTTGAGGCACATCCCAATGATCTTTATGTGGAAGGACTACCAGAAAACATTCCTTTCCGAAGTCCCTCGTGGTATGGAATCCCAAGGCTGGAAAAAATCATTCAAGTGGGCAATCGAATTAAATTTGTTATTAAAAGACCAGAGCTTCTGACTCACAGTACAACTGAGGTTACTCAGCCAAGAACAAACACGCCAGTCAAAGAAGACTGGAATGTCAGAATTACCAAGCTACGGAAGCAAGTAGAAGAGATTTTCAATTTGAAGTTTGCCCAAGCTCTCGGCCTCACAGAAGCAGTGAAAGTACCATACCCCGTGTTTGAGTCAAATCCTGAGTTCCTCTATGTAGAAGGCTTGCCAGAAGGAATTCCTTTTCGAAGCCCCACCTGGTTTGGAATTCCACGTCTAGAAAGGATTGTCCGTGGGAGTAATAAAATCAAGTTTGTTGTTAAAAAACCTGAGCTTGTTGTTTCCTACTTGCCTCCTGGCCTGGCTAGTAAAATTAACACTAAAGCACTGCAGTCCCCCAAAAGGCCCCGCAGCCCTGGGAGTAACTCAAAGGTCCCTGAGATCGAGGTCACTGTGGAAGGCCCTAATAACAACAATCCTCAGACCTCCACTGTCCGAACTCCTACACAGACTAATGGTTCTAATGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTCGAAGCCTGGAATGCCAAAATCACGGACCTGAAACAGAAAGTTGAAAATCTTTTCAATGAAAAATGTGGGGAAGCTCTCGGCCTTAAGCAAGCTGTGAAGGTGCCGTTCGCGTTGTTCGAGTCTTTCCCTGAAGACTTCTACGTGGAAGGCCTGCCCGAGGGGGTGCCCTTCCGCAGACCCTCCACTTTCGGCATTCCGAGGCTGGAGAAGATCCTCCGGAACAAGGCCAAAATTAAGTTCATCATTAAGAAGCCCGAAATGTTTGAGACCGCGATCAAGGAGAGCACCTCCTCCAAGAGCCCTCCCAGAAAAATAAATTCATCACCCAGCGTTAATACTACTGCATCAGGTGTTGAAGACCTTAACATCATTCAAGTAACAATTCCAGACGATGATAATGAAAGACTGTCAAAAGTTGAAAAAGCAAGGCAGCTAAGAGAACAAGTGAATGACCTCTTCAGTCGGAAGTTTGGTGAAGCTATCGGCATGGGTTTCCCGGTGAAAGTCCCCTACAGGAAAATCACAATCAACCCTGGGTGTGTGGTGGTGGACGGCATGCCTCCTGGGGTGTCGTTCAAAGCCCCCAGCTACCTGGAAATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAAATTCACAGTTATCAGACCATTTCCAGGACTTGTGATTAATAACCAGTTGGTTGATCAGAGTGAGTCAGAAGGCCCAGTGATTCAAGAATCAGCGGAGCCAAGCCAGTTGGAAGTTCCATCCACAGAGGAAATTAAAGAGACAGACGGAAGCTCTCACATCAAGCAAGAACCAGACCCCACGTGGTAG

Related Sequences

XP_004840081.1 Protein

Gtf2i PREDICTED: general transcription factor II-I isoform X10 [Heterocephalus glaber]

Length: 998 aa      View alignments
>XP_004840081.1
MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTAQANRMSVDAVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILDNKAGISFIIKRPFLEPKKHLGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQAGPSETDDVDEKLPLSKSLQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSPPTKRPKSNEAPPPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGLASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSTVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPSVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPSTEEIKETDGSSHIKQEPDPTW