Details from NCBI annotation
| Gene Symbol |
Caln1 |
|
Gene Name
|
calneuron 1, transcript variant X3 |
| Entrez Gene ID |
101715866
|
Database interlinks
Part of NW_004624740.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
calneuron 1
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000006475, Guinea pig)
| Protein Percentage |
88.12% |
| CDS Percentage |
87.61% |
| Ka/Ks Ratio |
0.15916 (Ka = 0.0761, Ks = 0.4784) |
Gene Details
calneuron 1
External Links
Gene Match(Ensembl Protein ID:ENSP00000378690, Human)
| Protein Percentage |
88.12% |
| CDS Percentage |
84.8% |
| Ka/Ks Ratio |
0.1169 (Ka = 0.0802, Ks = 0.6861) |
Gene Details
calneuron 1
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000083193, Mouse)
| Protein Percentage |
87.36% |
| CDS Percentage |
82.5% |
| Ka/Ks Ratio |
0.08592 (Ka = 0.0831, Ks = 0.967) |
Gene Details
calneuron 1 (Caln1), mRNA
External Links
| Protein Percentage |
99.54% |
| CDS Percentage |
90.11% |
| Ka/Ks Ratio |
0.00305 (Ka = 0.002, Ks = 0.6556) |
Sequence SequenceType object (2)
Length: 798
bp
Location: 9049600..9588902
Strand: +
>XM_004840003.1
ATGAGAAAAAGGGGAATGGAGGAGCCCCCAAAGGGGGAGAGGAGCCACTGCCGAGAAGCCAGACCCCCAACTTTCCCACCTGGCAAGTCTCCCCCCAAACCCCAGGACCTAGGTTGTTTTGCAGCCCTCAGGGAAAAGATGCCGTTCCACCACGTGACTGCCGGCCTGTTGTACAAGGGGAATTACCTCAACCGCTCTCTCTCTGCTGGCAGTGACAGTGAGCAGCTGGCTAACATCTCTGTGGAGGAGCTCGATGAAATCCGAGAGGCCTTTCGAGTTCTGGACCGAGATGGGAATGGCTTCATCTCCAAGCAGGAGCTGGGCATGGCCATGCGCTCCCTGGGGTACATGCCGAGCGAGGTGGAGCTGGCCATCATCATGCAGCGCCTGGACATGGATGGGGATGGCCAGGTGGATTTTGATGAATTCATGACAATTCTTGGGCCCAAACTGGTATCTTCCGAAGGTCGTGATGGTTTTCTTGGAAACACAATAGACAGCATATTCTGGCAGTTCGACATGCAGAGGATAACGCTGGAAGAGCTGAAGCACATTCTCTACCATGCCTTCCGGGATCATTTAACAATGAAGGACATTGAGAACATCATCATCAACGAGGAGGAGAGCCTGAATGAAACCTCGGGGAACTGCCAAACAGAGTTCGAAGGAGTGCATTCCCAGAAGCAGAACAGACAGACCTGCGTCCGGAAGAGCCTCATATGCGCCTTCGCCATGGCCTTCATCATAAGCGTGATGCTGATCGCAGCCAATCAGATCCTGCGGAGCGGCATGGAGTAG
Related Sequences
Caln1 PREDICTED: calcium-binding protein 8 isoform X3 [Heterocephalus glaber]
Length: 265
aa
View alignments>XP_004840060.1
MRKRGMEEPPKGERSHCREARPPTFPPGKSPPKPQDLGCFAALREKMPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNETSGNCQTEFEGVHSQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME