Details from NCBI annotation

Gene Symbol Rabgef1
Gene Name RAB guanine nucleotide exchange factor (GEF) 1, transcript variant X5
Entrez Gene ID 101713290

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000015358 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013844, Guinea pig)

Protein Percentage 97.96%
CDS Percentage 93.14%
Ka/Ks Ratio 0.0289 (Ka = 0.0092, Ks = 0.3171)

Rabgef1 ENSMUSG00000025340 (Mouse)

Gene Details

RAB guanine nucleotide exchange factor (GEF) 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026390, Mouse)

Protein Percentage 96.33%
CDS Percentage 87.78%
Ka/Ks Ratio 0.02201 (Ka = 0.0166, Ks = 0.7545)

Rabgef1 ENSRNOG00000000895 (Rat)

Gene Details

RAB guanine nucleotide exchange factor (GEF) 1 (Rabgef1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001196, Rat)

Protein Percentage 96.13%
CDS Percentage 87.44%
Ka/Ks Ratio 0.02265 (Ka = 0.0177, Ks = 0.7791)

Genome Location

Sequence Coding sequence

Length: 1479 bp    Location: 8624205..8688734   Strand: +
>XM_004839998.1
ATGAGCCTTAAGTCTGAACGCCGAGGAATTCATGTGGATCAGTCAGAGCTGCTGTGCAAGAAAGGATGTGGTTACTACGGCAACCCTGCTTGGCAAGGCTTCTGCTCCAAGTGCTGGAGGGAGGAGTACCAGAAAGCCAGGCAAAAGCAGATCCAGGAGGATTGGGAGCTGGCAGAGCGGCTTCAGCGGGAGGAGGAAGAGGCCTTTGCCAGCAGTCAGAGCAGCCAGGGAGCCCAATCTCTCACATTTTCTAAGTTTGAAGAAAAGAAAACCAACGAGAAGACCCGAAAGGTTACCACAGTGAAGAAATTCTTCAGTGCTTCTTCCAGGGTCGGATCTAAGAAGGCAGAAATTCAGGAAGCAAAAGCTCCTAGTCCTTCCATTAACCGGCAAACCAGCATTGAAACGGATAGAGTGTCTAAGGAGTTCATAGAATTTCTCAAGACCTTCCACAAGACAGGCCAAGAAATCTATAAACAGACCAAGATGTTTTTGGAAACAATGCATTACAAAAGGGACCTAAGCATTGAAGAACAGTCGGAGTGTACTCAGGACTTTTACCAGAGTGTAGCTGAGAAGATGCAGACTCGCGGGAAAGTGCCTCCAGAAAAAGTTGAGAAGATAATGGATCAGATTGAAAAGTACATCATGACCCGTCTCTATAAATACGTATTCTGTCCAGAAACTACTGATGATGAAAAGAAAGATCTTGCCATTCAAAAGAGGATCAGAGCGCTGCACTGGGTCACACCTCAGATGCTTTGTGTCCCTGTTAATGAAGAAATTCCAGAAGTTTCTGATATGGTGGTGAAAGCGATCACAGACATCATCGAGATGGACTCGAAGCGCGTGCCCCGAGACAAGCTGGCCTGTATCACCAGGTGCAGCAAGCACATCTTCAACGCCATCAAGATTACCAAGAATGAGCCTGCATCCGCAGACGACTTCCTGCCCACGCTCATCTACATTGTGCTGAAGGGCAACCCGCCCCGCCTGCAGTCCAACATCCAGTACATCACACGCTTCTGTAACCCGAGCCGGCTGATGACCGGAGAGGATGGCTACTACTTCACCAACCTGTGCTGTGCTGTGGCTTTCATTGAAAAATTGGATGCCCAGTCTCTGAATTTAAGCCAGGAGGATTTTGATCGCTACATGTCTGGCCAGACCTCTCCCAGGAAGCAGGAACCTGAGAGCTGGTCCCCGGACGCCTGCCTGGGCGTTAAGCAGATGTATAAGAACTTAGATCTCCTGTCTCAGTTGAATGAACGGCAGGAAAGGATCATGAGTGAAGCTAAGAAACTTGAAAAAGACCTAATAGATTGGACAGATGGAATTGCAAAAGAGGTGCAAGACATTGTTGAAAAATACCCACTTGAAATTAAGCCTGCAACCCAGCCATTAGCAGCTATAGACTCTGAAAATGTTGAGAACGACAAACTTCCTCCACCATTGCAACCACAAGTGTATGCAGGATGA

Related Sequences

XP_004840055.1 Protein

Rabgef1 PREDICTED: rab5 GDP/GTP exchange factor isoform X5 [Heterocephalus glaber]

Length: 492 aa     
>XP_004840055.1
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQKARQKQIQEDWELAERLQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQEAKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKMFLETMHYKRDLSIEEQSECTQDFYQSVAEKMQTRGKVPPEKVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQEPESWSPDACLGVKQMYKNLDLLSQLNERQERIMSEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPATQPLAAIDSENVENDKLPPPLQPQVYAG