Sequence details NCBI ID: XM_004839962.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gbas
Gene Name glioblastoma amplified sequence, transcript variant X2
Entrez Gene ID 101702030

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GBAS ENSCPOG00000004556 (Guinea pig)

Gene Details

glioblastoma amplified sequence

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004106, Guinea pig)

Protein Percentage 90.87%
CDS Percentage 88.76%
Ka/Ks Ratio 0.15164 (Ka = 0.0571, Ks = 0.3768)

GBAS ENSG00000146729 (Human)

Gene Details

glioblastoma amplified sequence

External Links

Gene Match (Ensembl Protein ID: ENSP00000313050, Human)

Protein Percentage 85.46%
CDS Percentage 85.7%
Ka/Ks Ratio 0.21986 (Ka = 0.0909, Ks = 0.4132)

Gbas ENSMUSG00000029432 (Mouse)

Gene Details

glioblastoma amplified sequence

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000083211, Mouse)

Protein Percentage 84.48%
CDS Percentage 82.07%
Ka/Ks Ratio 0.11029 (Ka = 0.0861, Ks = 0.7804)

Gbas ENSRNOG00000023919 (Rat)

Gene Details

glioblastoma amplified sequence (Gbas), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030538, Rat)

Protein Percentage 84.84%
CDS Percentage 82.67%
Ka/Ks Ratio 0.12019 (Ka = 0.0851, Ks = 0.708)

Genome Location

Sequence Coding sequence

Length: 849 bp    Location: 8176697..8211984   Strand: +
Raw sequence   
>XM_004839962.1
ATGGCGACGCGAGTGCTGCGCGCCCAAGGAGCGGCCGCGGCCCGAGGCCTCCTGCGGACGGCCGCCCCCTGCAGCCTGCTGCCCGGGCTCCGGAAACTGACATCTTCCAGCAACAGACCTCGAGAAGACAGCTGGTTAAAATCCTTATTTGTCAGGAAAGTTGATCCAAGAAAAGATGCTCACTCCAATCTCCTAGCCAAAAAGGAAACGAGCAGTCTGTACAAGTTACAGTTTCACAATGTTAAACCGGAATGCCTAGAAGAATACAACAAAATTTGTCAAGAGATGTTACCAAAGGTTCATGAAGATAAACATTATCCTTGCACTTTGGTGGGAACTTGGAACACGTGGTATGGCGAGCAGGATCAAGCTGTCCACCTCTGGAGGTATGAAGGAGGCTACCCCGCCCTCATGGAGGTCATGAGTAAACTAAAAGGAAATGAGGAATTTGCGAATTTCCGTAAGGCAAGAAGCAACATGCTTCTCTCTCGGAAGAACCAGCTGCTCCTAGAGTTCAGTTTCTGGAATGAACCTGTCCCCCGGTCAGGACCTAACATCTATGAACTCAGGTCTTACCACCTCCGACCAGGAACCATGATTGAGTGGGGCAATTACTGGGCCCGTGCAATTCGTTTCCGACAAGACAATAATGAAGCAGTGGGAGGATTCTTCTCTCAGATTGGGCAGCTATACATGGTGCATCATCTTTGGGCTTACAAGGATCTGCAGAGCCGGGAGGACACGCGGAACTCAGCCTGGCACAAACCCGGCTGGGAGGAGCTGGTGTATTACACAGGTATAATTATGCAAAGGAAAGAATCCAGCAAAGAATCGCCAGAGAAGGAATAA

Related Sequences

XP_004840019.1 Protein

Gbas PREDICTED: protein NipSnap homolog 2 isoform X2 [Heterocephalus glaber]

Length: 282 aa      View alignments
>XP_004840019.1
MATRVLRAQGAAAARGLLRTAAPCSLLPGLRKLTSSSNRPREDSWLKSLFVRKVDPRKDAHSNLLAKKETSSLYKLQFHNVKPECLEEYNKICQEMLPKVHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALMEVMSKLKGNEEFANFRKARSNMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYHLRPGTMIEWGNYWARAIRFRQDNNEAVGGFFSQIGQLYMVHHLWAYKDLQSREDTRNSAWHKPGWEELVYYTGIIMQRKESSKESPEKE