Details from NCBI annotation

Gene Symbol Ddx56
Gene Name DEAD (Asp-Glu-Ala-Asp) box helicase 56, transcript variant X1
Entrez Gene ID 101717253

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DDX56 ENSCPOG00000003359 (Guinea pig)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 56

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003036, Guinea pig)

Protein Percentage 92.49%
CDS Percentage 90.9%
Ka/Ks Ratio 0.11705 (Ka = 0.038, Ks = 0.3247)

DDX56 ENSG00000136271 (Human)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 56

External Links

Gene Match (Ensembl Protein ID: ENSP00000258772, Human)

Protein Percentage 91.76%
CDS Percentage 86.45%
Ka/Ks Ratio 0.07889 (Ka = 0.0469, Ks = 0.595)

Ddx56 ENSMUSG00000004393 (Mouse)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 56

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004507, Mouse)

Protein Percentage 89.56%
CDS Percentage 83.82%
Ka/Ks Ratio 0.08236 (Ka = 0.0615, Ks = 0.7472)

Ddx56 ENSRNOG00000004670 (Rat)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 56 (Ddx56), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006642, Rat)

Protein Percentage 89.83%
CDS Percentage 84.3%
Ka/Ks Ratio 0.08646 (Ka = 0.0621, Ks = 0.7182)

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location: 7563715..7572139   Strand: +
>XM_004839909.1
ATGGCGGACCTGGAGAGTCTGGGCTTCGAACACATGGGCCTGGATCCACGGCTCTTGCAGGCCATCGCCGACCAGGGCTGGTCGCGGCCCACGCTGATTCAAGAAAAGGCCATTCCGCTGGCGCTGGAGGGGAAGGACCTGCTGGCTCGGGCGCGGACGGGCTCCGGGAAGACGGCCGCGTACGCTATCCCGATGCTGCAGCTGCTGCTCCACCGGAAGGCGACAGGTCCTGTGGTGGAACAGGCTGTGAGAGGCCTTGTCCTTGTTCCTACCAAGGAGCTGGCACGGCAGGCCCAGTCCATGATTCAGCAGCTTGCTGCCTATTGTGCTCGAGATGTGCGGGTGGCCAATGTGTCAGCTGCTGAAGACTCAGCCTCACAGAGAGCTGTGCTGATGGAGAAGCCAGATGTAGTCGTGGGGACCCCGTCCCGCATATTAAACCACTTGCAGCAGGACACCCTGAAACTGCGCGACTCCCTGGAACTGCTGGTGATGGATGAAACTGATCTTCTGTTTTCTTTTGGCTTTGAGGAAGAACTGAAGAATCTTCTCTGTCACTTGCCCCGGATTTACCAGGCTTTTCTTATGTCAGCTACTTTTAACGAAGATGTGCAGGCCCTGAAGGAACTGGTACTGCATAACCCGGTTACCCTCAAGTTACAGGAGTCCCAGCTGCCAGGGCCAGACCAGTTACAGCAGTTTCAGGTGGTCTGTGAGACTGAGGAAGACAAGTTCCTGCTGCTCTATGCCCTGCTAAAGCTGTCGTTGATTCGGGGCAAGTCCCTGCTCTTCGTCAACACTCTGGAGCGGAGTTACCGGCTCCGCCTCTTCCTGGAGCAGTTCAGCATCCCTACCTGTGTGCTCAATGGTGAGCTTCCGCTGCACTCCAGGTGCCACATCATCTCTCAGTTCAACCAAGGCCTCTACGATTGTGTCATAGCAACAGATGCTGAAGTCCTCGGGCCCCCGGGCAAGGGCAAGCAGTGGGGCCGAAAGTCCAAAGGAGACAAGGCCTCCGACCCAGAGGCAGGTGTGGCCCGGGGCATAGACTTCCACCATGTGTCTGCAGTGCTAAACTTTGACCTTCCCCCCACTCCTGAGGCCTACATCCACCGGGCTGGGAGAACAGCTCGAGCCAACAACCCAGGCATAGTGTTGACCTTCGTGCTGCGGGAGGAGCAGTTGCAGTTGGGGAAGATCGAGGAGCTTCTCAGTGATGAGGGGTCGGCTCCTGTCCTGCTTCCCTACCAGTTCCACATGGAGGAGATTGAGGGCTTCCGTTATCGCTGCAGGGATGCCATGCGCTCGGTGACGAAGCAGGCCATCCGGGAGGCGAGGCTGAAGGAGATCAAGGAGGAGCTGTTGCACTCTGAGAAGCTCAAGACGTACTTTGAGGACAACCCCCGGGACCTGCAGCTGCTGCGGCATGACCTGCCCCTGCACCCCGCGGTGGTGAAGCCACATCTGGGCCACGTCCCTGACTACCTGGTCCCCCCGGCTCTCCGTGGCCTTGTTGGCACTCACAGGAAGCGGAAGAAGCTGTTCTCTGGCAAGAAGGCTAAGAAGGTGAAGACCCAGAATCCGCTGCGCAGCTTCAAGCACAGAGGGAAGAAACCCAGACCGGCAGCATCGCCATCCTGA

Related Sequences

XP_004839966.1 Protein

Ddx56 PREDICTED: probable ATP-dependent RNA helicase DDX56 isoform X1 [Heterocephalus glaber]

Length: 546 aa      View alignments
>XP_004839966.1
MADLESLGFEHMGLDPRLLQAIADQGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDVRVANVSAAEDSASQRAVLMEKPDVVVGTPSRILNHLQQDTLKLRDSLELLVMDETDLLFSFGFEEELKNLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLHSRCHIISQFNQGLYDCVIATDAEVLGPPGKGKQWGRKSKGDKASDPEAGVARGIDFHHVSAVLNFDLPPTPEAYIHRAGRTARANNPGIVLTFVLREEQLQLGKIEELLSDEGSAPVLLPYQFHMEEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPDYLVPPALRGLVGTHRKRKKLFSGKKAKKVKTQNPLRSFKHRGKKPRPAASPS