Details from NCBI annotation

Gene Symbol Crot
Gene Name carnitine O-octanoyltransferase, transcript variant X2
Entrez Gene ID 101716437

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CROT ENSCPOG00000011375 (Guinea pig)

Gene Details

carnitine O-octanoyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010225, Guinea pig)

Protein Percentage 89.45%
CDS Percentage 89.91%
Ka/Ks Ratio 0.19583 (Ka = 0.0552, Ks = 0.2819)

CROT ENSG00000005469 (Human)

Gene Details

carnitine O-octanoyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSP00000413575, Human)

Protein Percentage 84.15%
CDS Percentage 83.93%
Ka/Ks Ratio 0.15426 (Ka = 0.0875, Ks = 0.5671)

Crot ENSMUSG00000003623 (Mouse)

Gene Details

carnitine O-octanoyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003720, Mouse)

Protein Percentage 83.66%
CDS Percentage 81.37%
Ka/Ks Ratio 0.134 (Ka = 0.0985, Ks = 0.7352)

Crot ENSRNOG00000006779 (Rat)

Gene Details

carnitine O-octanoyltransferase (Crot), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063856, Rat)

Protein Percentage 83.66%
CDS Percentage 80.5%
Ka/Ks Ratio 0.11945 (Ka = 0.0983, Ks = 0.8233)

Genome Location

Sequence Coding sequence

Length: 1839 bp    Location: 34696529..34730168   Strand: +
>XM_004839792.1
ATGGAAAACCAACTGGCTAAATCAACGGAAGAACGAACATTTCAGTACCAGGATTCTCTTCCATCACTGCCTGTTCCTTCACTTGAAGAATCATTAAAAAAATACCTTGAATCAGTAAAGCCATTTGCAAATGAAGAAGAATATAAGAAAACTGAAGAAATAGTTACAAAATTTAAAAATGGAATTGGAGGAAAATTGCAGCAGAAATTACTTGAAAGGGCAAAAGGAAAAAGAAATTGGCTGGAAGAGTGGTGGCTGAATGCGGCCTACCTGGACGTCCGGACGCCGTCACAGCTGAATGTCAACTTCGCAGGTCCTTCAGCCCATTTTGAGCACTACTGGCCTCCAGAGGAAGGTGCACAGTTAGACAGAGGAAGTATAATACTTTGGCATAATTTGAACTACTGGCAGCTATTGAGAAAAGAAAAAATGCCTGTTCATAAAGTTGGAGGTATTCCTCTAGATATGAATCAATTCCGGATGCTGTTTTCTACCTGCAAGGTTCCGGGAGTTACTAGAGATTCGATTATGAATTATTTTAGGACAGAGAGCGAGGGGCATTCCCCAAGCCACGTTGCAGTGCTGTGCCGAGGCCGAGTGTTTGTCTTTGACGCACTGCACGAAGGATGTCTGATCACCCCGCCGGAGCTGCTCAGACACCTGACGTACATCCACGAAAAGTGCCAGCGAGAGCCCCCGGGCCCTGGAGTTGCTGCACTGACCACTGAGGAGAGAACCCTGTGGGCCAAGGCACGAGAGTATCTGATCAGTCTGGATCCGGAGAACTTGGGTTCATTAGAAAGAATTCAGAGCAGCTTATTCGTGTATTCCATGGAGGACAGCAGTGCTCATGTCACACCGGAAGATTACTCCCAGATCCTTGCCATGGTCCTTACTGGAGATCCAACAGTACGCTGGGGTGACAAATCCTATAACTTGATTTCCTTTTCTAATGGAATCTTTGGCTGTAATTGTGATCATGCTCCTTACGATGCCATGGTCATGGTGAACGTCGCCCACTACGTGGATGAGAGGATTTTAGAGACAGAAGGAAGATGGAAGGGTTCAGAAAAAGTACAGGATATACCACTTCCAGAGGAGCTTGTGTTTACCGTGGATGAGAAGATATTAAATGACATCAAGCAAGCTAAAGCCCAGTTTCTTCAAGAGGCGTCTGATCTGCAAGTCGTGGCACCCGCCTTCACCTCTTTCGGCAAAAGGCTGACCAAGAAGCACTCTCTGCACCCCGACACATTCATCCAGCTCGCGCTGCAGCTGGCCTATTACAGACTGCACGGCCGCCCTGGCTGCTGCTATGAGACAGCGATGACGAGATATTTCTATCATGGCCGCACAGAAACGATGCGGTCGTGCACAGTGGAGGCCGTCAGGTGGTGCCAGTCCATGCAGGACCCTTCCGCCAGCCTTTTTGAGCAGCAGCAGCAGATGCTGGAGGCTTTTGCAAAGCATAATAAAATGATGAATGAATGTTCTGCCGGGAAAGGGTTTGACCGACACCTTTTGGGTCTTTCACTCCTAGCAAAGGAGGAGGGTCTCCCAGTCCTGGAGCTCTTCATGGACCCACTGTTCTCCAGAAGTGGAGGCGGCGGGAATTTTATTCTCTCGACAAGCCTGATTGGTTATCTACGAATCCAGGGAGTAGTGGTTCCCATGGTGCACAGCGGATATGGATTTTTCTACCACATCAGAGACGACAGGTTCATTGTGGCCTGCTCAGCCTGGAGGTCTTGTCTGGAGACGGATGCGGAAAAGCTCGTTGAGCACACTTTTCGTGCTTTCCATGACATGATGCGGCTGATGAACACTGCTCATCTTTAG

Related Sequences

XP_004839849.1 Protein

Crot PREDICTED: peroxisomal carnitine O-octanoyltransferase isoform X2 [Heterocephalus glaber]

Length: 612 aa      View alignments
>XP_004839849.1
MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVKPFANEEEYKKTEEIVTKFKNGIGGKLQQKLLERAKGKRNWLEEWWLNAAYLDVRTPSQLNVNFAGPSAHFEHYWPPEEGAQLDRGSIILWHNLNYWQLLRKEKMPVHKVGGIPLDMNQFRMLFSTCKVPGVTRDSIMNYFRTESEGHSPSHVAVLCRGRVFVFDALHEGCLITPPELLRHLTYIHEKCQREPPGPGVAALTTEERTLWAKAREYLISLDPENLGSLERIQSSLFVYSMEDSSAHVTPEDYSQILAMVLTGDPTVRWGDKSYNLISFSNGIFGCNCDHAPYDAMVMVNVAHYVDERILETEGRWKGSEKVQDIPLPEELVFTVDEKILNDIKQAKAQFLQEASDLQVVAPAFTSFGKRLTKKHSLHPDTFIQLALQLAYYRLHGRPGCCYETAMTRYFYHGRTETMRSCTVEAVRWCQSMQDPSASLFEQQQQMLEAFAKHNKMMNECSAGKGFDRHLLGLSLLAKEEGLPVLELFMDPLFSRSGGGGNFILSTSLIGYLRIQGVVVPMVHSGYGFFYHIRDDRFIVACSAWRSCLETDAEKLVEHTFRAFHDMMRLMNTAHL