Sequence details NCBI ID: XM_004839770.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sema3e
Gene Name sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
Entrez Gene ID 101710144

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEMA3E ENSCPOG00000011802 (Guinea pig)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010615, Guinea pig)

Protein Percentage 87.68%
CDS Percentage 87.04%
Ka/Ks Ratio 0.10804 (Ka = 0.0595, Ks = 0.5511)

SEMA3E ENSG00000170381 (Human)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E

External Links

Gene Match (Ensembl Protein ID: ENSP00000303212, Human)

Protein Percentage 82.38%
CDS Percentage 77.86%
Ka/Ks Ratio 0.08725 (Ka = 0.1032, Ks = 1.1833)

Sema3e ENSMUSG00000063531 (Mouse)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073612, Mouse)

Protein Percentage 79.3%
CDS Percentage 77.02%
Ka/Ks Ratio 0.09485 (Ka = 0.1195, Ks = 1.2596)

Sema3e ENSRNOG00000006631 (Rat)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E (Sema3e), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008936, Rat)

Protein Percentage 79.02%
CDS Percentage 77.48%
Ka/Ks Ratio 0.10495 (Ka = 0.1206, Ks = 1.1495)

Genome Location

Sequence Coding sequence

Length: 2154 bp    Location: 31851602..31608498   Strand: -
Raw sequence   
>XM_004839770.1
ATGCTGCTGGATGAATACCAGGAACGGCTCTTCGTGGGGGGCAGGGACCTTCTGTACTCCCTCAGCCTGGAGCGAATCAGCGATGGCTACAGAGAGATCCACTGGCCCAGCTCAGCACTAAAAATAGAAGAATGCATAATGAAAGGGAAAGACGCAAGCGAGTGTGCAAATTTCGTGCGTGTTTTGCACCACTACAACAGGACACACCTCCTGACGTGTGGTACCGGGGCCTTCGATCCACTGTGCACCTTCATCCGAGTCGGCTATCATGCGGAGGAGCACTTGTTTCAACTGGAGTCTCACAGATGGGAGCGAGGAAGGGGCAGATGCCCCTTTGACCCCAGCTCCTCCTTCGTCTCCACCTTGATTGGTGCCGACCTCTTCACCGGCCTCTACGGGGACTACTGGGGTCGAGACGCTGCCCTCAGCCGCAGCCTGGGCCACCTGGGCCACATGCGCACCGAGCCAGATGATGAGCGGCTGCTGAAAGACCCCAAGTTCGTGGGCGCCTACATGATCCCAGACAACGAGGACCGCGAGGACGACAAGGTCTACTTCTTCTTCACCGAGCGCGCGCAGGAGGCCGAGGCGGAGCGCGGCACGCAGGCCCTTTTCGCCCGCGTGGGGCGGCTGTGCGTGAACGACGCGGGTGGGCAGAGGATCCTGGTGAACAAGTGGGCCACCTTCCTGAAAGCCAGGCTGGTGTGCTCCGTGCCCGGCGGGAACGGGATCGACACGCACTTCGATGAATTAGAGGATGTTTTTTTGCTGCATACCAGAGAAGATAAGAACCCGGTGATATTTGGACTGTTTAACACTACCAGCAACATCTTCAGAGGACATGCTATCTGTGTCTATCACATGTCCAGCATCCGGGCAGCCTTCAATGGGCCATATGCACACAGGGAAGGTCCTGAGTATCACTGGTCACTCTACGAAGGGAAAGTCCCCTACCCAAGGCCTGGTTCCTGTGCCAGCAAGGTGAACGGAGGAAGGTATGGGACCACCAAGGACTACCCCGACGACACCATTCGGTTTGCAAGGAGCCATCCACTAATGTATCATCCCATCAAACCCGCCCATAAAAAGCCAGTATTGGTGAAGACAGATGGAAAATACAACCTGAAACAGATAGCAGTGGACCGAGTGGAAGCCGAGGATGGCCAGTATGATGTCTTATTCATCGGGACAGATGCTGGAATTGTGCTCAAACTCATCACAATTTACAACCAAGAAACAGAATCTATGGAAGAAGTAATTCTAGAAGAACTTCAAATATTCAAGGATCCAGTTCCTATTATTTCTATGGAGATTTCTTCAAAGAGACAGCAGCTGTACGTCGGGTCCCCCTCCGCGGTGGCTCAGGTCCGGCTCCATCAGTGTGACGTCTACGGCCGCGCCTGCGCAGACTGCTGCCTGGCGCGGGACCCCTACTGCGCCTGGGACGGGGTCTCCTGCTCGCGCTACTTCCCCACGGGCACTCAGGCCAAGAGGCGGTTCCGTCGACAAGACATTCGGCATGGAAATGCAGCGCAGCAGTGTGTGGGGCAGCAGTTTGCTGGAGATGGTTTGGATAAAACCGAAGAGCACCTAGTTTATGGCATCGAGAACAACAGTACCCTGCTGGAATGCACCCCACGGTCTTTACAAGCCAAGGTCATCTGGCTAGTACAGAAAGGACATGACACAAGGAAAGAAGAGGTGCGGACGGACGACAGGGTGCTGAAGTTGGACCTGGGGCTGCTCTTCCTCCGGCTGCGCAGCTCAGACGCCGGGACCTACTTCTGCCAGGCCGTGGAGCACGGCTTCGTGCACACGGTGCGCAGCCTGGTGCTGGACGTGCTGGAGGAGCGCGGCGTGCACGTGATGTTCGGCAGGGACCCCCGCGAGGCTGGGCCCCACAGGGCGCGCTGCCCGGCCCCCAGCAGCCTGGCGCCCGCCGCCCGGCCCTGGTACAAGGAGTTCCTGCAGCTCCTCGGGTACAGCAACTTCCAGCGGGTGGAGGAGTACTGCGAGAAGGTGTGGTGCGGCAAGAGGAAGACAAGGAAGCTCAGGGTGTCGGCGTCCAAGTGGAAGCTCCCCGGGACCCCAGACAAGAGGCCGCGCGCCCCGCCCGAGCGCTACCGCCTGCCCCGGCACGCGAGGGGCTCCTGA

Related Sequences

XP_004839827.1 Protein

Sema3e PREDICTED: semaphorin-3E [Heterocephalus glaber]

Length: 717 aa      View alignments
>XP_004839827.1
MLLDEYQERLFVGGRDLLYSLSLERISDGYREIHWPSSALKIEECIMKGKDASECANFVRVLHHYNRTHLLTCGTGAFDPLCTFIRVGYHAEEHLFQLESHRWERGRGRCPFDPSSSFVSTLIGADLFTGLYGDYWGRDAALSRSLGHLGHMRTEPDDERLLKDPKFVGAYMIPDNEDREDDKVYFFFTERAQEAEAERGTQALFARVGRLCVNDAGGQRILVNKWATFLKARLVCSVPGGNGIDTHFDELEDVFLLHTREDKNPVIFGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHREGPEYHWSLYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDTIRFARSHPLMYHPIKPAHKKPVLVKTDGKYNLKQIAVDRVEAEDGQYDVLFIGTDAGIVLKLITIYNQETESMEEVILEELQIFKDPVPIISMEISSKRQQLYVGSPSAVAQVRLHQCDVYGRACADCCLARDPYCAWDGVSCSRYFPTGTQAKRRFRRQDIRHGNAAQQCVGQQFAGDGLDKTEEHLVYGIENNSTLLECTPRSLQAKVIWLVQKGHDTRKEEVRTDDRVLKLDLGLLFLRLRSSDAGTYFCQAVEHGFVHTVRSLVLDVLEERGVHVMFGRDPREAGPHRARCPAPSSLAPAARPWYKEFLQLLGYSNFQRVEEYCEKVWCGKRKTRKLRVSASKWKLPGTPDKRPRAPPERYRLPRHARGS