Details from NCBI annotation

Gene Symbol Cacna2d1
Gene Name calcium channel, voltage-dependent, alpha 2/delta subunit 1, transcript variant X4
Entrez Gene ID 101708369

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CACNA2D1 ENSCPOG00000012138 (Guinea pig)

Gene Details

calcium channel, voltage-dependent, alpha 2/delta subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010913, Guinea pig)

Protein Percentage 97.05%
CDS Percentage 91.14%
Ka/Ks Ratio 0.03365 (Ka = 0.0139, Ks = 0.4136)

CACNA2D1 ENSG00000153956 (Human)

Gene Details

calcium channel, voltage-dependent, alpha 2/delta subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000349320, Human)

Protein Percentage 93.78%
CDS Percentage 87.85%
Ka/Ks Ratio 0.0527 (Ka = 0.031, Ks = 0.5886)

Cacna2d1 ENSMUSG00000040118 (Mouse)

Gene Details

calcium channel, voltage-dependent, alpha2/delta subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049457, Mouse)

Protein Percentage 93.32%
CDS Percentage 86.46%
Ka/Ks Ratio 0.04901 (Ka = 0.0341, Ks = 0.6954)

Cacna2d1 ENSRNOG00000033531 (Rat)

Gene Details

calcium channel, voltage-dependent, alpha2/delta subunit 1 (Cacna2d1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034572, Rat)

Protein Percentage 94.71%
CDS Percentage 87.17%
Ka/Ks Ratio 0.03884 (Ka = 0.0259, Ks = 0.667)

Genome Location

Sequence Coding sequence

Length: 3243 bp    Location: 30794124..30436662   Strand: -
>XM_004839768.1
ATGGCCTCAACGTGCATCCACTTAGCTATTAATATCTCTGTGTTTAGAGCGGTTGTTATTGGGCCCTGCTCAGAGGACTCTCTTCCTTCTTCCCTCTGCAGGATCAAGTCCTGGGTGGACCGGATGCAGGAAGACTTGGTCACGCTGGCGAAAACAGCAAGTGGCGTCACCCAGCTCGTTGACATTTATGAGAAATACCAAGACTTGTATACTGTGGAGCCAAATAATGCCCGCCAGCTGGTGGAGATTGCAGCCAGGGATATTGAGAAGCTCCTGAGCAACAGATCGAAAGCCCTGGAGCGCCTGGCTTTGAAAGCAGAGAAAGTGCAAGCAGCCCACCAGTGGCGGGAGGACTTTGCAAGCAATGAAGTTGTCTACTACAATGCTAAGGATGATCTTGATTCTGAAAAAAATGACAGTGAGCCAGGCAGCCAGAGGATTAAGCCTGTTTTTGTTGAAGACGCTAATTTTGGAAGACAAATATCCTACCAGCATGCAGCAGTCCATATTCCCACCGACATCTACGAGGGCTCAACAATAGTGTTGAATGAACTCAACTGGACAAGTGCCTTAGATGAAGTTTTCAAGAAAAACCGAGAGGAGGACCCTACCTTGCTGTGGCAGGTGTTTGGCAGTGCCACTGGCCTGGCCCGCTACTACCCAGCTTCTCCGTGGGTAGACAGTAGAACTCCAAACAAGATTGATCTTTATGATGTACGCCGGAGACCATGGTACATCCAAGGGGCAGCGTCTCCCAAGGACATGCTCATTCTGGTGGACGTGAGCGGGAGCGTCAGTGGCCTGACTCTGAAGCTGATCCGAACGTCTGTCTCTGAAATGCTGGAAACGCTCTCAGATGACGACTTCGTGAACGTAGCTTCCTTTAACAGCAATGCTCAGGATGTAAGCTGCTTTCAGCACCTGGTCCAAGCAAATGTAAGAAATAAGAAAGTGTTGAAAGACGCAGTGAATAACATCACAGCAAAAGGAATAACAGATTACAAGAAAGGCTTCAGTTTTGCTTTTGAACAGTTGCTTAATTATAACGTTTCCAGAGCCAACTGCAATAAGATCATCATGTTGTTCACGGATGGAGGAGAAGAGAGAGCACAGGAGATATTTACCAAATATAATAAAGACAAAAAAGTTCGCGTGTTCACATTTTCCGTGGGTCAGCACAACTACGACCGAGGACCCATCCAGTGGATGGCCTGCGAAAACAAAGGTTATTATTATGAAATTCCATCCATTGGAGCAATAAGGATTAATACTCAGGAATATCTGGACGTACTAGGAAGACCGATGGTTTTAGCGGGAGAAAAAGCTAGAAAAGTCCAGTGGACAAATGTGTACTTGGATGCGCTGGAACTGGGACTCGTCATTACTGGAACTCTTCCGGTCTTCAACAGAACCGGCCAGTCTGAAAATGAGACAAATTTAAAGAACCAGCTGATTCTTGGTGTGATGGGTGTCGATGTCTCTTTGGAAGACATTAAGAGACTGACACCACGCTTCACGCTATGCCCCAATGGCTATTATTTTGCAATTGATCCTAATGGTTATGTGTTGCTGCATCCAAATCTTCAGCCAAAGGAACCAGTCACTTTGGACTTCCTGGATGCAGAGCTGGAGAATGATATAAAAGTGGAGATTCGAAATAAAATGATAGACGGAGAAAGTGGAGAAAAAACTTTCAGAACTCTAGTAAAATCTCAAGATGAGAGATACATTGACAAAGGCAACAGGACCTACACGTGGACCCCAGTCAATGGGACAGACTACAGTTTGGCCTTGGTATTACCAACCTACAGTTTTTACTATATAAAAGCCAAAATAGAGGAGACAATAACTCAGGCCAGATATTCAGAAACCCTGAAACCAGATAACTTTGAGGAATCTGGCTACACATTCATAGCCCCAAGAGATTACTGCAATGACCTTAAACCATCTGATAACAACACTGAATTCCTTTTAAATTTCAATGAGTTTATTGACAGAAAAACTCCAAACAACCCATCATGTAATACAGATTTGATTAATAGAGTCTTGCTGGATGCAGGTTTTACAAATGAACTTGTCCAAAATTACTGGAGTAAGCAGAAAAACATCAAGGGAGTGAGAGCACGGTTTGTTGTGACTGATGGTGGGATTACCAGAGTTTATCCCAAAGAGGCTGGAGAAAATTGGCAAGAAAACCCAGAAACCTATGAGGACAGCTTCTACAAGCGGAGCCTGGATAATGATAACTATGTTTTCACAGCCCCCTACTTTAATAAAAGTGGACCTGGTGCCTATGAGTCAGGCATTATGGTAAGCAAAGCTGTAGAAATATATATCCAAGGAAAATTCCTTAAGCCTGCAGTTGTTGGAATTAAAATTGATGTGAATTCCTGGATAGAGAATTTCACCAAAGCCTCAATCAGGGATCCGTGTGCTGGTCCAATTTGTGACTGCAAAAGAAACAGTGATGTAATGGATTGTGTGATTCTAGATGATGGTGGATTTCTTTTGATGGCAAATCATGATGATTATACGAATCAGATTGGACGATTTTTTGGAGAGATCGACCCCAGCCTGATGAGACACCTGGTTAATATACCAGTGTATGCTTTTAACAAATCTTACGACTATCAGTCAGTGTGCGAGCCAGGTGCAGCCCCGAAGCAAGGAGCCGGACATCGCTCGGCACACGTGCCCTCCATAGCAGACGTGCTGCAGATCGGCTGGTGGGCCACCGCTGCTGCCTGGTCTATTCTCCAGCAGTTTCTCCTGAGTTTGACCTTTCCTGGGCTCCTGGAAGCAGTGGACGTGGAGGAGGAGGACTTCACAGCCTCCCTGTCCAAGCAGAGCTGCATCACTGAGCAAACCCAGTACTTCTTCTACAATGACAGCAAGTCCTTCAGCGGCATCCTGGACTGCGGGAACTGCTCCAGAATCTTTCACGTAGAAAAGCTTATGAACACCAACTTAATGTTCATAATGGTCGAGAGCAAAGGGTCCTGTCCCTGTGACACTCGGCTGCTCATCCAGGCGGAGCAGACGTCTGATGGTCCAAATCCTTGCGATATGGTTAAGCAACCCAGATACCGAAAAGGGCCAGATGTCTGCTTTGACAACAGTGAGATGGAGGATTATTCCGACTGTGGTGGTGTTTCTGGATTAAGATCCTCCCTGTGGTCTGTTCTCGGACTCCAGTTTCTACTCCTCTGGCTTGTATCTGGCAGCAGACACTACCTATTGTGA

Related Sequences

XP_004839825.1 Protein

Cacna2d1 PREDICTED: voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X4 [Heterocephalus glaber]

Length: 1080 aa      View alignments
>XP_004839825.1
MASTCIHLAINISVFRAVVIGPCSEDSLPSSLCRIKSWVDRMQEDLVTLAKTASGVTQLVDIYEKYQDLYTVEPNNARQLVEIAARDIEKLLSNRSKALERLALKAEKVQAAHQWREDFASNEVVYYNAKDDLDSEKNDSEPGSQRIKPVFVEDANFGRQISYQHAAVHIPTDIYEGSTIVLNELNWTSALDEVFKKNREEDPTLLWQVFGSATGLARYYPASPWVDSRTPNKIDLYDVRRRPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQDVSCFQHLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCNKIIMLFTDGGEERAQEIFTKYNKDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIRINTQEYLDVLGRPMVLAGEKARKVQWTNVYLDALELGLVITGTLPVFNRTGQSENETNLKNQLILGVMGVDVSLEDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKEPVTLDFLDAELENDIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLALVLPTYSFYYIKAKIEETITQARYSETLKPDNFEESGYTFIAPRDYCNDLKPSDNNTEFLLNFNEFIDRKTPNNPSCNTDLINRVLLDAGFTNELVQNYWSKQKNIKGVRARFVVTDGGITRVYPKEAGENWQENPETYEDSFYKRSLDNDNYVFTAPYFNKSGPGAYESGIMVSKAVEIYIQGKFLKPAVVGIKIDVNSWIENFTKASIRDPCAGPICDCKRNSDVMDCVILDDGGFLLMANHDDYTNQIGRFFGEIDPSLMRHLVNIPVYAFNKSYDYQSVCEPGAAPKQGAGHRSAHVPSIADVLQIGWWATAAAWSILQQFLLSLTFPGLLEAVDVEEEDFTASLSKQSCITEQTQYFFYNDSKSFSGILDCGNCSRIFHVEKLMNTNLMFIMVESKGSCPCDTRLLIQAEQTSDGPNPCDMVKQPRYRKGPDVCFDNSEMEDYSDCGGVSGLRSSLWSVLGLQFLLLWLVSGSRHYLL