Sequence details NCBI ID: XM_004839740.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Phtf2
Gene Name putative homeodomain transcription factor 2, transcript variant X2
Entrez Gene ID 101699054

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHTF2 ENSCPOG00000003576 (Guinea pig)

Gene Details

putative homeodomain transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003230, Guinea pig)

Protein Percentage 92.7%
CDS Percentage 88.93%
Ka/Ks Ratio 0.11608 (Ka = 0.0435, Ks = 0.3751)

PHTF2 ENSG00000006576 (Human)

Gene Details

putative homeodomain transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000400958, Human)

Protein Percentage 93.71%
CDS Percentage 90.85%
Ka/Ks Ratio 0.09522 (Ka = 0.0312, Ks = 0.3275)

Phtf2 ENSMUSG00000039987 (Mouse)

Gene Details

putative homeodomain transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000114087, Mouse)

Protein Percentage 91.3%
CDS Percentage 86.08%
Ka/Ks Ratio 0.07939 (Ka = 0.0459, Ks = 0.5784)

Phtf2 ENSRNOG00000013517 (Rat)

Gene Details

putative homeodomain transcription factor 2 (Phtf2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059716, Rat)

Protein Percentage 91.4%
CDS Percentage 85.75%
Ka/Ks Ratio 0.08041 (Ka = 0.0467, Ks = 0.5808)

Genome Location

Sequence Coding sequence

Length: 2244 bp    Location: 26965855..27070808   Strand: +
Raw sequence   
>XM_004839740.1
ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGTGCATATGATCAACAAATATGGGAAAAATCTGTTGAACAAAGAGAAATCAAGGGGTTAAGGAATAAACCAAAGAAAACAGCACATGTGAAGCCAGACCTCATAGATGTTGATCTGGTAAGAGGGTCTGCGTTTGCTAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTAACTAGAAAAGGAATTGTTCGAGTTGTATTTTTTCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAGGTCATCTTTTTCTGGCTCCTTGTCCTTTACCTTCTTCAAGTTGCCGCAGTAGTATTGTTCTGGTCCACTTCCAGCCCGCACAGCATACCTCTGACAGAAGTGGTTGGGCCCATATGGCTGATGCTGCTCTTGGGAACGGTGCACTGCCAGATTGTCTCAACGCGAACACCCAAGCCACCTCTCAGTACCAGTGGTAAAAGAAGAAGGAAGCTGAGGAAAGCAGCTCACTTGGAGGTGCACAGGGAAGGGGATGGCTCCAGCACGACAGACAACACACAGGGGGGCACGGCCCCGAGCCGCCGGCCGAGCAGCTCCTGCGGCGTGGGCGCCGTCCTCAGGGATCTCTGGCATGCCGCTTTCCTCCTGTCCCGATCAACGAAAACAAAGAATTCAATTGATAAATCAACAGAGACTGACAATGGCTACGTGTCCCTTGATGGGAAGAAGACTGTTAAAAGCAGTGAAGATGGAATACAAAATCATGAACCTCAGTGTGAATCTGTCCGTCCCGAAGAGACCACCTGGATCCCAGCAACACCGAGGAGCGTTCCTAGCAAAGATACCCAAAGGACAGTAACAAATGTCTCTGATGAAGTGTCCAGTGAGGAAGGTCCTGAAGCAGGATATTCACCCCGGCGACACATGGACAGGACTTCTGAAAGCACCCTTCGGAATAGAAAATCACCCCATTACAAGAAGCAGTATCCTAATGAGGATGCCCCTAAATCGGGTACTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGACCACAAGGCCAGAATCTGAAACAGAAGATGTATTATGGGAAGACTTGTTACATTGTGCAGAATGCCGTTCGTCTTGTACCAGTGAGACAGATGTGGAAAATCCTCAGATTAACCCATGTGTGAAAAAAGAATATAGAGACGACCCTTTTCATCAGAGTCACTTGCCCTGGCTCCACAGTGCTCACCCGGGATTAGAAAAGATAAGCGCTATTGTGTGGGAAGGCAACGACTGTAAAAAGGCGGACATGTCTGTGCTCGAGATCAGTGGAATGATCATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTTTGGAAATGCAGTCTCTCTAATCCTGGGCTTAACACCATTTGTTTTCCGGCTTTCTCAAGCCACAGACTTGGAACAACTCACAGCACACTCTGCTTCAGACCTTTATGTGATTGCATTTGGTTCTAATGAAGACATTATGGTTCTCTCTATGGTTATAATAAGTTTTGTGGTTCGTGTGTCTCTCGTATGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGCGATTGCTTTTTGCAAAACTCTTTGGACATTTAACATCTGCAAGGAGGGCTCGAAAATCTGAGGTTCCTCATTTCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTATCTCTCCGTTCCTATCTTAAGCGTCGAGGTCCACAGAGATCCGTTGATGTAATAGTCTCATCTGCCTTCTTGCTGACTATCTCAGTTGTATTTATCTGTTGTGCTCAGCTGCTTCACGTGCATGAGATCTTCCTTGATTGCCACTACAACTGGGAACTGGTCATCTGGTGCATCTCCTTAACACTCTTCCTCTTAAGATTTGTTACCCTGGGATCAGAAACAAGTAAGAAGTATAGCAATACCTCAATATTACTTACTGAACAGATCAACCTCTACTTGAAAATGGAGAAGAAACCTAACAAAAAGGAGGAACTGACACTAGTGAATAATGTTTTAAAACTGGCTACTAAACTACTAAAGGAATTGGACAGCCCGTTTAGATTATATGGGCTTACAATGAATCCGCTGCTTTATAACATCACCCAGGTTGTTATCCTCTCAGCTGTTTCTGGTGTTATCAGTGACTTGCTTGGATTTAATTTGAAGCTGTGGAAGATTAAATCATAA

Related Sequences

XP_004839797.1 Protein

Phtf2 PREDICTED: putative homeodomain transcription factor 2 isoform X2 [Heterocephalus glaber]

Length: 747 aa      View alignments
>XP_004839797.1
MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAVVLFWSTSSPHSIPLTEVVGPIWLMLLLGTVHCQIVSTRTPKPPLSTSGKRRRKLRKAAHLEVHREGDGSSTTDNTQGGTAPSRRPSSSCGVGAVLRDLWHAAFLLSRSTKTKNSIDKSTETDNGYVSLDGKKTVKSSEDGIQNHEPQCESVRPEETTWIPATPRSVPSKDTQRTVTNVSDEVSSEEGPEAGYSPRRHMDRTSESTLRNRKSPHYKKQYPNEDAPKSGTSCSSRCSSSRQDSETTRPESETEDVLWEDLLHCAECRSSCTSETDVENPQINPCVKKEYRDDPFHQSHLPWLHSAHPGLEKISAIVWEGNDCKKADMSVLEISGMIMNRVNSHIPGIGYQIFGNAVSLILGLTPFVFRLSQATDLEQLTAHSASDLYVIAFGSNEDIMVLSMVIISFVVRVSLVWIFFFLLCVAERTYKQRLLFAKLFGHLTSARRARKSEVPHFRLKKVQNIKMWLSLRSYLKRRGPQRSVDVIVSSAFLLTISVVFICCAQLLHVHEIFLDCHYNWELVIWCISLTLFLLRFVTLGSETSKKYSNTSILLTEQINLYLKMEKKPNKKEELTLVNNVLKLATKLLKELDSPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS