Details from NCBI annotation

Gene Symbol Ptpn12
Gene Name protein tyrosine phosphatase, non-receptor type 12, transcript variant X2
Entrez Gene ID 101697685

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPN12 ENSCPOG00000005099 (Guinea pig)

Gene Details

protein tyrosine phosphatase, non-receptor type 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004587, Guinea pig)

Protein Percentage 84.43%
CDS Percentage 85.67%
Ka/Ks Ratio 0.24941 (Ka = 0.0964, Ks = 0.3863)

PTPN12 ENSG00000127947 (Human)

Gene Details

protein tyrosine phosphatase, non-receptor type 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000248594, Human)

Protein Percentage 85.35%
CDS Percentage 85.95%
Ka/Ks Ratio 0.15375 (Ka = 0.0774, Ks = 0.5032)

Ptpn12 ENSMUSG00000028771 (Mouse)

Gene Details

protein tyrosine phosphatase, non-receptor type 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030556, Mouse)

Protein Percentage 82.79%
CDS Percentage 83.14%
Ka/Ks Ratio 0.15195 (Ka = 0.0937, Ks = 0.617)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040891, Rat)

Protein Percentage 61.58%
CDS Percentage 71.39%
Ka/Ks Ratio 0.3309 (Ka = 0.27, Ks = 0.816)

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location: 26747850..26828537   Strand: +
>XM_004839737.1
ATGGAGCAAGTGGAGATCCTGAGGAGATTCATCCAGAGGGTCCAGGCCATGAAGAGTCCGGACCACAATGGGGAGGACAACTTCGCCCGGGACTTCATGCGATTAAGAAGATTGTCTACCAAATATAGGACAGAAAAGATATATCCCACAGCCACTGGAGAAAAAGAAGAAAATGTTAAAAAGAACAGATATAAGGACATACTGCCATTTGATCACAGCAGAGTTAAGTTGACTTTAAAGACTCCTTCTCAAGATTCAGATTATATCAATGCAAATTTTATTAAGGGTGTCTATGGGCCAAAAGCATATGTGGCAACCCAAGGACCTTTAGCAAATACAGTAATAGATTTTTGGAGGATGATATGGGAGTACAACGTTGTAATTATTGTGATGGCTTGCCGGGAATTTGAGATGGGCAGGAAAAAATGTGAACGCTATTGGCCTTTGTATGGGGAAGACCCTATAACGTTTGCACCGTTTAAGATTTCTTGTGAAGATGAACAAGCGAGAACAGACTACTTCATCAGGACACTGTTACTTGAATTTCAAAATGAATCTCGTAGGCTGCATCAGTTTCATTATGTGAACTGGCCAGACCATGATGTCCCGTCATCATTTGATTCCATCCTGGATATGATAAGCTTAATGAGGAAATACCAAGAGCATGAAGATGTGCCGATTTGTATTCACTGCAGTGCAGGCTGTGGAAGGACGGGCGCCATCTGTGCCATCGATTATACCTGGAACTTACTAAAAGCGGGGAAAATACCAGAGGAATTTAATGTATTTAATTTAATACAAGAAATGAGAACACAACGACATTCTGCAGTTCAAACAAAGGAGCAGTATGAGCTTGTTCATAGAGCTATTGCACAACTGTTTGAAAAACAGCTTCAATTGTATGAAATTCATGGAGCCCAGAAAATTACTGATGAAGGGAATGAAATTACCACTGAAAACACGGTCAGCTCCATAGATACTGAAAAGCAAGATTCTCCTCCTCCAAAGCCCCCACGGACTCGCAGTTGTCTTGTGGAAGGAGATGCGAAGGAAGAAATCCTGCAGCCTCCAGAGCCCCACCCAGTGCCGCCCATCCTGACACCTTCTCCCCCGTCCTCCTTCCCGACGGTCACCACGGTGTGGCAGGACAACGACAGATACCACCCCAAGCCAGTGTTGCACATGGTTTCCTCGGAGCAACATTCGACAGACCTCAACAGAAACTACAATAAATCAGCAGACCTTCCAGGGAGAAACGAATCACCCATTGAACAGATAGATAAAAAACTGGAACGAAATTTAAGTTTTGAGATTAAGAAGGTCCCTCTTCAAGAGGGACCAAAAAGTTTTGATGGGAACACACTCTTGAATAGGGGACATGCATTTAAGATAAAATCTGCTTCATCCTGTACAGCTGATAAAATATCTAAGTCCCCTGAGTTAAGCGCAGGGGATGTGAAAGCCGATGACATCTCCCCGAACTCCTGTGTGGACTGCAGCACCCCACAGCTCAGCGCAGCCCCTGTGTCTCTCCCTGAGGAGCCCAGGCTGAGCGCAGACACACCCCCAAGACCAGACCGCCTGCCCCTCGACAGGAAGGGACACGCGGCGTGGTCGTTCCACGGACCCGAAAATGCCACCCCTGCCCCTGCAGCCTCTGAAGACAGATCCCCAGATAGCCACTGTCCAGCCCTGAAACCTCTGAGCTCAAGCCCCAACCCCCCCATACCAGGCGAAGCCCAGGACCATGAGCAGCCCAACGGTTCGCCACTGTTCCGAGTCCCCCTGAGTTTCACGAATCCTCTTCATTCGGATGACTCGGATTCGGATGACAGGAACTCTGATGGTGCTGGGACCAAGAACAAAACTAGCATTTCAACAGCAAGTGCCACAGTCTCTGCTGCCACCAGCACTGAGAGCATTTCCGCCAGGAAAGTGGTGCCCATGTCCATTGCTAGACACGATGCAGCAGGAGCGCTGCGTCCTGGTGCTGACAAAGATGTTGATGTTAGTGAAGACTCACCTCCTCCCCTCCCTGAAAGAACTCCTGAATCTTTTGTACTGGCAGGTGAACATAATATACCTATAGGATCTGAATGGAGTGAACTTCACAGTCAGAAATGGTCTGAACAAAGACAGTCGGAAGGCTTGGTAACCTCTGGAAGTGAAAAATGTGATCATCCAGCAGCAGGTCTACCAGAGACTTGTACAGAATCTCCACTTACTGTAAATGACAAGAAAGATCAGATGACAGAAAGTCCAGCAGAAGCCACAGATATTGGTTTTGGTAATCGCTGTGGAAAACCCAAAGGACCAAGAGACCCACCTTCAGAATGGACATGA

Related Sequences

XP_004839794.1 Protein

Ptpn12 PREDICTED: tyrosine-protein phosphatase non-receptor type 12 isoform X2 [Heterocephalus glaber]

Length: 780 aa     
>XP_004839794.1
MEQVEILRRFIQRVQAMKSPDHNGEDNFARDFMRLRRLSTKYRTEKIYPTATGEKEENVKKNRYKDILPFDHSRVKLTLKTPSQDSDYINANFIKGVYGPKAYVATQGPLANTVIDFWRMIWEYNVVIIVMACREFEMGRKKCERYWPLYGEDPITFAPFKISCEDEQARTDYFIRTLLLEFQNESRRLHQFHYVNWPDHDVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQLYEIHGAQKITDEGNEITTENTVSSIDTEKQDSPPPKPPRTRSCLVEGDAKEEILQPPEPHPVPPILTPSPPSSFPTVTTVWQDNDRYHPKPVLHMVSSEQHSTDLNRNYNKSADLPGRNESPIEQIDKKLERNLSFEIKKVPLQEGPKSFDGNTLLNRGHAFKIKSASSCTADKISKSPELSAGDVKADDISPNSCVDCSTPQLSAAPVSLPEEPRLSADTPPRPDRLPLDRKGHAAWSFHGPENATPAPAASEDRSPDSHCPALKPLSSSPNPPIPGEAQDHEQPNGSPLFRVPLSFTNPLHSDDSDSDDRNSDGAGTKNKTSISTASATVSAATSTESISARKVVPMSIARHDAAGALRPGADKDVDVSEDSPPPLPERTPESFVLAGEHNIPIGSEWSELHSQKWSEQRQSEGLVTSGSEKCDHPAAGLPETCTESPLTVNDKKDQMTESPAEATDIGFGNRCGKPKGPRDPPSEWT