Sequence details NCBI ID: XM_004839732.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc146
Gene Name coiled-coil domain containing 146, transcript variant X1
Entrez Gene ID 101696448

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC146 ENSCPOG00000005922 (Guinea pig)

Gene Details

coiled-coil domain containing 146

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005343, Guinea pig)

Protein Percentage 87.83%
CDS Percentage 87.68%
Ka/Ks Ratio 0.14652 (Ka = 0.064, Ks = 0.4369)

CCDC146 ENSG00000135205 (Human)

Gene Details

coiled-coil domain containing 146

External Links

Gene Match (Ensembl Protein ID: ENSP00000285871, Human)

Protein Percentage 83.14%
CDS Percentage 85.34%
Ka/Ks Ratio 0.19704 (Ka = 0.0932, Ks = 0.4728)

Ccdc146 ENSMUSG00000064280 (Mouse)

Gene Details

coiled-coil domain containing 146

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110900, Mouse)

Protein Percentage 73.01%
CDS Percentage 78.45%
Ka/Ks Ratio 0.2206 (Ka = 0.1711, Ks = 0.7756)

Ccdc146 ENSRNOG00000012932 (Rat)

Gene Details

coiled-coil domain containing 146 (Ccdc146), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017374, Rat)

Protein Percentage 74.13%
CDS Percentage 78.63%
Ka/Ks Ratio 0.19461 (Ka = 0.1659, Ks = 0.8526)

Genome Location

Sequence Coding sequence

Length: 2871 bp    Location: 26445984..26580754   Strand: +
Raw sequence   
>XM_004839732.1
ATGGAAGATAGCTCCACAGACACAGAAAAAGAAGAGGAAGAGGAGGAAGATGAAAAGTATAAAAAAGACATCGGTTATGCCATAGTGCCCACGATTAACATTCAAGACGAGCGGTTTGTTGATTTATCTGCAACTCCAGCTTTCCTTTGTCTGAATGAGTTGCACGCCATGGGAAAACTTCCTGGAACCAGAGTGGCAGAGTTAAAAGCCAAGTACACATTGCTGCATGACACCATGATAAGCACCCAAGACTCCGAGGTCCAGCTGCTGCAGAACGCCAAGCGCTTTATGGAGCAGATACAGCAGCAGCAGCTCCACCTGCAGCAAGCGGATGGTTTCCCTGAGGCACTGTCCACCGAGGTCTCCAAACTGCGGGAGCAGCTGCTCAAGTACCAAAATGAATACAGCTCAGTGAAGGAAAGAGAGTTCCACAACCAGTACCGATTAAGCAGCTTAACCGAAGAAAAGAACCTCATATTAAAGGAATTTGAGAAGCTATCTAAGCCAGGAGAGATGGAGAATAAGATGAAAATGCTGAGAGAAAGCACTGAAGAATTACGTAAGGAAATAATACAGAAGAAACTAGAAATTAAAAATTTACAGGAAGATTTGGCATCAAAGCAAAAGCAATTAGTAAAGGAGCAGAAGGAACTAGAAGAAGTGTTGGAACATCAGGTTGTCCTGAAGGATGAAGTGGTTCAGCATCAAACCATTCCTATACAGATTGGAAAGGAGATAGAAAAAATAACACGCAAGAAAGTAGAAATGGAAAGGAAAAAAATTGTCTTGGAATATGAAGTCAAAGAGCTAAACAACTCCCTAAAGAAAGTCAAAAGCAAAGTTAGCACTCTGGTGGAAGAGAAGGAGGACGTAATGAAGGAAGTTGAAGGCAAACGAGCCTTACTTGAAGTGAGAGAGCGGGAGTGTAACCAACTGGTCAAGCTTTTGGAACTAACCCGGGAGAATGAGGCGTCGTCGCTAACTGAAAGAGGGGTCTTGGACCTCAGTTTACAAAACAGTCTCATCGACAAGCAGAACTACCATGATGAACTCTCTCACAAGCAGAGAGAGAAGGAGCGAGATTTTCGAAATTTAAAAAAGATGGAGCTGCTCTTGAAAGTGTCGTGGGACTCACTCACACAGACTCAAGCCCTGCACCAGAGGCTTCTGTTAGAGAAGGACGCAATGCCTAAAGATAATTCTGTGTTATCTGAAAGAAGGAGAGAGCTCCACAAGGAAGTTGAAGTCGCCAAGAGGAATTTGGCCCAGCAGAAAGTTCTATCAGAAACTGAGTCGAAGTTAGTAGAACAACAACTTGCAGAAGAAAACAAGCTTATAAAGGAACAAGAAACCTTGCGAAATTTGGTATTCAACCTTGTCCATGTGATAAAAGTCAAAAATGATGAAAAGGAGCAAAAGTCCAAGGATTTCTTGAGAGCTAAGCAAAAATATAACAACCTTGTTAAGGAAATCAAAGCGAAGGATCTTGAAATCAGGGTACACAAGAAGAAAAGACGTGAAATTCATCGGAGGCTCAAAGAATTTGCTAAACTGTATGATGCAATTCGAAATGAAAGAAACAAGTTTGTTAACCTACTCCACAAAGCTCACCAGAAAGTAAATGAAATTAGAGAGAGGCATAAGATGTCACTAAACGAACTGGAAATTTTAAGAAGCAGCGCAGTTACTCAAGAAAGAAAGCTACAAAATAGCTTGCTGAAACAGGCCAACAACATTACCATCAGAGAGAGCATGAGAAGCGACGTAAGCAAAATTGTCTCCAAAGTTCAGGAAATGAGAGAGAAGAAGGAAGCGCAGTTGAGCAACCTGGACAGACTGGCGCACGTGATCACTGCGGTAGAGGAGGAGATGGTGCACCTCCGCAGAAAGTACGAGAAAGCTGTCCAGCGGCGAAATGAATGTGGCGTTCAGCTGATAGAGCGGGAAGAGGAAGTGTCCATTTTTTATGAAAAAATAGACATCCAAGAAAAACTGAAACTAAATGGGGAAATCGAAATCCACGTCCTGGAAGAAAAGATCCGGTTCCTGAAGCTGAAGATTTCGGAGAAGCAAAGACAGATTCACGTGTCTCAGAAATTACTGCCGGCCAAGAGGGCCCTGGACGCGGAGCTCGCCGTGCTCCAGATTCAGTTTTCACAGTGTACAGACAGAATAAAAGACCTGGAGAAAGAGTTTGTAAACCCTGAGAGTAAGAACAGAACCCGCCTCCTTCCAGGAAAAGATCTGAGCCAAGAAGAAATGATCAAAAAATTAGATGAGCTGGAACTGCAGCTGGCCAAGAAGGAGGAGAAGTTACTGGAGAAGGATTTCATCTATGAACAGGTCTCCCGGCTCACGGACAGGCTCTACAGCAAAACAGAGGCCTGTAAGCTAGACACACTGCACTTGGCCAAGAAGATGAACGGCTATCAGAGGAGGATCAAAGATGCTACAGAAAAAATGATGGCTGTCATTGCTGAGCTGTCCATGAAACAAGCCCTGACCATTGAACTCCAAAAAGAAGTAAGAGAGAAGGAAGAATTCATCTTCTCTTGCAATTCCAGAATAGAAAAGGGTCTGCCGCTCAATAAAGATATTGAGACAAAATGGTTGAAGGTCCTTCGAGATGAAGAGATGTATGCCATGGCGGTGGCTGAGAAGTCCCGGGAGTTCTTGGAAGCAGAGAATCACCAGTTGCCCAATGGCATCTACACGACTGCGGAGCAGCGTCCAAATGCCTACATCCCCGAGGCAGACGCTACTCTGCCTTTGCCAAAACCATATGGTGCTCTGGCTCCATTTAAGCCCAGCGAGCCCGGAGCCAACATGAGACACATAAGGAAACCTGTTATAAAGCCGATGGAAATCTGA

Related Sequences

XP_004839789.1 Protein

Ccdc146 PREDICTED: coiled-coil domain-containing protein 146 isoform X1 [Heterocephalus glaber]

Length: 956 aa      View alignments
>XP_004839789.1
MEDSSTDTEKEEEEEEDEKYKKDIGYAIVPTINIQDERFVDLSATPAFLCLNELHAMGKLPGTRVAELKAKYTLLHDTMISTQDSEVQLLQNAKRFMEQIQQQQLHLQQADGFPEALSTEVSKLREQLLKYQNEYSSVKEREFHNQYRLSSLTEEKNLILKEFEKLSKPGEMENKMKMLRESTEELRKEIIQKKLEIKNLQEDLASKQKQLVKEQKELEEVLEHQVVLKDEVVQHQTIPIQIGKEIEKITRKKVEMERKKIVLEYEVKELNNSLKKVKSKVSTLVEEKEDVMKEVEGKRALLEVRERECNQLVKLLELTRENEASSLTERGVLDLSLQNSLIDKQNYHDELSHKQREKERDFRNLKKMELLLKVSWDSLTQTQALHQRLLLEKDAMPKDNSVLSERRRELHKEVEVAKRNLAQQKVLSETESKLVEQQLAEENKLIKEQETLRNLVFNLVHVIKVKNDEKEQKSKDFLRAKQKYNNLVKEIKAKDLEIRVHKKKRREIHRRLKEFAKLYDAIRNERNKFVNLLHKAHQKVNEIRERHKMSLNELEILRSSAVTQERKLQNSLLKQANNITIRESMRSDVSKIVSKVQEMREKKEAQLSNLDRLAHVITAVEEEMVHLRRKYEKAVQRRNECGVQLIEREEEVSIFYEKIDIQEKLKLNGEIEIHVLEEKIRFLKLKISEKQRQIHVSQKLLPAKRALDAELAVLQIQFSQCTDRIKDLEKEFVNPESKNRTRLLPGKDLSQEEMIKKLDELELQLAKKEEKLLEKDFIYEQVSRLTDRLYSKTEACKLDTLHLAKKMNGYQRRIKDATEKMMAVIAELSMKQALTIELQKEVREKEEFIFSCNSRIEKGLPLNKDIETKWLKVLRDEEMYAMAVAEKSREFLEAENHQLPNGIYTTAEQRPNAYIPEADATLPLPKPYGALAPFKPSEPGANMRHIRKPVIKPMEI