Details from NCBI annotation

Gene Symbol Pmpcb
Gene Name peptidase (mitochondrial processing) beta, transcript variant X2
Entrez Gene ID 101721772

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PMPCB ENSCPOG00000008108 (Guinea pig)

Gene Details

peptidase (mitochondrial processing) beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007291, Guinea pig)

Protein Percentage 91.39%
CDS Percentage 87.16%
Ka/Ks Ratio 0.09728 (Ka = 0.0465, Ks = 0.478)

PMPCB ENSG00000105819 (Human)

Gene Details

peptidase (mitochondrial processing) beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000249269, Human)

Protein Percentage 90.8%
CDS Percentage 89.3%
Ka/Ks Ratio 0.12148 (Ka = 0.0461, Ks = 0.3793)

Pmpcb ENSMUSG00000029017 (Mouse)

Gene Details

peptidase (mitochondrial processing) beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030882, Mouse)

Protein Percentage 88.14%
CDS Percentage 83.98%
Ka/Ks Ratio 0.10323 (Ka = 0.0669, Ks = 0.6484)

Pmpcb ENSRNOG00000012693 (Rat)

Gene Details

peptidase (mitochondrial processing) beta (Pmpcb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017017, Rat)

Protein Percentage 88.14%
CDS Percentage 83.78%
Ka/Ks Ratio 0.10539 (Ka = 0.0683, Ks = 0.6481)

Genome Location

Sequence Coding sequence

Length: 1470 bp    Location: 26061468..26045745   Strand: -
>XM_004839715.1
ATGGCGGCGGCGGCGGCCAGAGTGGTCCTGCTGCCGGCGGCGAGACGGCGCCTGTGCGGTTTGGTGGAAAGGCAACGGGGCCCCGGCGCATCCGGGCGGCCATTGTATTTTGGAGGTAACAGATTGAGAAGTACCCAGGTAGCTGCACAGGTTGTTCTGAATGTTCCTGAAACGCAAGTGACATGTTTGGAAAATGGACTCAGAGTGGCCTCTGAAGACTCTGGGCTGTCAACGTGCACAGTTGGGCTCTGGATTGATGCTGGAAGTCGATATGAAAATGAGAAGAATAATGGATCAGCTCACTTTCTGGAGCATATGGCTTTCAAGGGCACCAGAAAGAGGTCCCAGTTAGACCTGGAGCTTGAGATTGAAAACATGGGCGCTCATCTCAATGCCTACACCTCCAGGGAGCAGACTGTGTATTATGCCAAAGCCCTCTCTAAAGACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAGAAGCAGAGATTGAACGCGAGCGTGGAGTGATCCTTAGAGAGATGCAGGAAGTTGAAACCAATTTACAGGAAGTTGTTTTTGATTATCTTCATGCCACAGCTTATCGAAATACAGCACTCGGAAGGACAATTTTGGGACCAACTGAAAATATTAAGTCTATAAGTCGTAAGGACTTAGTGGATTATATAACTACACATTATAAGGGGCCAAGAATGGTGCTTGCTGCTGCTGGAGGTGTTTCCCACGATGAACTGCTTGAGTTAGCGAAGTTTCATTTTGGTGACTCTCTCTGTGCTCACAAAGGAGAAATACCAACTCTGCCTCCCTGCCAGTTCACAGGAAGTGAGATTCGTGTGCGGGATGACAAGATGCCCTTGGCACACCTTGCAATAGCTGTCGAAGCTGTTGGCTGGGTGCATCCAGATACAATTTGCCTCATGGTTGCAAACACACTGATTGGCAACTGGGATCGCTCTTTCGGAGTAGGGATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTGTCAGGGCAGTCTCTGCCACAGCTTCCAGTCTTTCAACACCTCCTACACAGATACAGGATTATGGGGACTCTACATGGTTTGTGAACCAGCCACAGTTGCAGACATGATACATGCTGTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTAACTGATAGTGAAGTTGCACGAGCCAAAAACCTTCTGAAAACAAACATGTTGTTACAGCTTGACGGTTCTACACCAATTTGTGAAGATATTGGTAGGCAGATGTTATGCTACAATAGAAGAATTCCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGAATGCCAAGACACTTCGAGAAGTCTGCACCAAATACATCTATGACAAAAGTCCAGCTCTTGCTGCTGTTGGTCCTGTTAAGCAGCTACCAGATTTTAACCAGATTTGCAGTAACATGTGCTGGCTTCGTGGTTAA

Related Sequences

XP_004839772.1 Protein

Pmpcb PREDICTED: mitochondrial-processing peptidase subunit beta isoform X2 [Heterocephalus glaber]

Length: 489 aa      View alignments
>XP_004839772.1
MAAAAARVVLLPAARRRLCGLVERQRGPGASGRPLYFGGNRLRSTQVAAQVVLNVPETQVTCLENGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGSAHFLEHMAFKGTRKRSQLDLELEIENMGAHLNAYTSREQTVYYAKALSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYRNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRMVLAAAGGVSHDELLELAKFHFGDSLCAHKGEIPTLPPCQFTGSEIRVRDDKMPLAHLAIAVEAVGWVHPDTICLMVANTLIGNWDRSFGVGMNLSSKLAQLTCQGSLCHSFQSFNTSYTDTGLWGLYMVCEPATVADMIHAVQKEWMRLCTSVTDSEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAKTLREVCTKYIYDKSPALAAVGPVKQLPDFNQICSNMCWLRG