Details from NCBI annotation

Gene Symbol Hbp1
Gene Name HMG-box transcription factor 1, transcript variant X2
Entrez Gene ID 101706080

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HBP1 ENSCPOG00000002375 (Guinea pig)

Gene Details

HMG-box transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002159, Guinea pig)

Protein Percentage 94.35%
CDS Percentage 90.71%
Ka/Ks Ratio 0.08829 (Ka = 0.0303, Ks = 0.3432)

HBP1 ENSG00000105856 (Human)

Gene Details

HMG-box transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000222574, Human)

Protein Percentage 95.53%
CDS Percentage 93.26%
Ka/Ks Ratio 0.09003 (Ka = 0.0228, Ks = 0.2534)

Hbp1 ENSMUSG00000002996 (Mouse)

Gene Details

high mobility group box transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131158, Mouse)

Protein Percentage 93.0%
CDS Percentage 90.27%
Ka/Ks Ratio 0.09732 (Ka = 0.0365, Ks = 0.3753)

Hbp1 ENSRNOG00000008927 (Rat)

Gene Details

HMG-box transcription factor 1 (Hbp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012004, Rat)

Protein Percentage 91.6%
CDS Percentage 89.32%
Ka/Ks Ratio 0.10439 (Ka = 0.0425, Ks = 0.4067)

Genome Location

Sequence Coding sequence

Length: 1545 bp    Location: 22531551..22504759   Strand: -
>XM_004839670.1
ATGGTGTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGTACAGAAACTCCTGCTGGTGATGGACAAGAGAGCGTCAGGAATGAATGACTCCCTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCGTCACCTGGATATAACTGCTGTGATGAGCACATGGAGCTTGATGACCTGCCTGAACTTCAGGCTGTGCAAAGTGATCCTACGCAATCTGCCATATACCAGCTGAGTTCGGATGTTTCACATCAAGAGTATCCAAGATCATCTTGGAACCAGAATACCTCAGACATATCAGAAAATACTTACCCTGAAAGTGAGGTGGATTGGCTGACAGAATTAGCAAATATTGCCACAAGTCCGCAAAGCCCACTCATGCAGTGCTCATTTTACAACAGACCATCTCCTGTACACATCATTGCTACAAGCAAAAGTTTACATTCCTATGCACGCCCCCCGCCAGTGTCCTCTTCTTCGAAGAGTGAGCCAGCCTTCCCACATCACCGCTGGAAGGAGGAAACACCAGTGAGACATGAGAGGGCAAATAGTGAGTCAGAGTCTGGCATTTTCTGCATGTCCTCCCTGTCAGATGATGATGACTTGGGATGGTGCAATTCCTGGCCTTCAACTGTTTGGCACTGTTTTTTAAAAGGCACACGTCTGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAGACGTGGAAGACTTTGCTAGAGCTGAAGGCTGTGAGAATGAGGAAGATCTCCAGACGGGCACTCACAAGGGCTATGGTTCTGATGGTCTGAAGTTATTATCACATGAAGAAAGTGTATCGTTTGGTGAATCTGTACTGAAGTTGACTTTTGATCCTGGTACAGTAGAAGATGGTTTACTTACAGTAGAGTGTAAGCTGGACCACCCTTTCTATGTTAAAAATAAAGGTTGGTCATCGTTTTACCCGAGCTTGACTGTGGTGCAGCACGGCATTCCATGCTGTGAGGTCCATACTGGTGATGTCTGTCTACCTCCTGGACACCCCGATGCCATTAATTTTGACGATTCAGGTGTTTTTGATACATTTAAAAGCTATGACTTCACACCTATGGATTCTTCTGCAGTCTATGTGTTGAGTAGTATGGCTCGTCAGCGTCGTGCATCTTTGTCTTGTGGAGGACCTAGTGGTCAAGACTTTGCAGGATCTGGATTCAGTAAGAATTGTGGCTCGGCTGGATCGTCACAGCTCTCTTCCAGTTCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCCAGTTCTCCTAATAAGTGCAAAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAAAGTACAGAGTTGAATATACTCAGATGTATCCAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTGGTGACAGGTGGAAGAAAATGAAGAATGAAGAGAGGAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAGCAAAAACGTTTAAATCCTGACTGTTGGAAAAGGAAAAGAACCAATTCAGTATGTTTCACCAAGTAG

Related Sequences

XP_004839727.1 Protein

Hbp1 PREDICTED: HMG box-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 514 aa      View alignments
>XP_004839727.1
MVWEVKTNQMPNAVQKLLLVMDKRASGMNDSLELLQCNENLPSSPGYNCCDEHMELDDLPELQAVQSDPTQSAIYQLSSDVSHQEYPRSSWNQNTSDISENTYPESEVDWLTELANIATSPQSPLMQCSFYNRPSPVHIIATSKSLHSYARPPPVSSSSKSEPAFPHHRWKEETPVRHERANSESESGIFCMSSLSDDDDLGWCNSWPSTVWHCFLKGTRLCFHKGSNKEWQDVEDFARAEGCENEEDLQTGTHKGYGSDGLKLLSHEESVSFGESVLKLTFDPGTVEDGLLTVECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEVHTGDVCLPPGHPDAINFDDSGVFDTFKSYDFTPMDSSAVYVLSSMARQRRASLSCGGPSGQDFAGSGFSKNCGSAGSSQLSSSSLYAKAVKNHSSGTVSASSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCWKRKRTNSVCFTK