Sequence details NCBI ID: XM_004839656.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cbll1
Gene Name Cbl proto-oncogene, E3 ubiquitin protein ligase-like 1, transcript variant X4
Entrez Gene ID 101701435

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000006196 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005588, Guinea pig)

Protein Percentage 88.46%
CDS Percentage 89.98%
Ka/Ks Ratio 0.25413 (Ka = 0.0685, Ks = 0.2697)

CBLL1 ENSG00000105879 (Human)

Gene Details

Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000401277, Human)

Protein Percentage 97.89%
CDS Percentage 95.88%
Ka/Ks Ratio 0.0645 (Ka = 0.0106, Ks = 0.1639)

Cbll1 ENSMUSG00000020659 (Mouse)

Gene Details

Casitas B-lineage lymphoma-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099038, Mouse)

Protein Percentage 96.39%
CDS Percentage 91.47%
Ka/Ks Ratio 0.05332 (Ka = 0.0195, Ks = 0.3666)

Cbll1 ENSRNOG00000007253 (Rat)

Gene Details

Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase (Cbll1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009565, Rat)

Protein Percentage 96.69%
CDS Percentage 92.07%
Ka/Ks Ratio 0.05392 (Ka = 0.0181, Ks = 0.335)

Genome Location

Sequence Coding sequence

Length: 999 bp    Location: 22028627..22016133   Strand: -
Raw sequence   
>XM_004839656.1
ATGGATCACACTGACAATGAGTTACAAGGCACTAATAGTTCTGGATCGTTGGGTGGTCTTGATGTTCGCAGACGAATTCCTATAAAACTCATCTCCAAACAAGCGAACAAAGCCAAACCTGCACCTCGAGCTCAAAGGACTATAAACAGGATGCCTGCAAAGGCACCAACTGGATTTGATTATAATGAAGAAGAACGGTATGACTGTAAAGGGGGCGAACTGTTTGGAAATCAGCGAAGATTTCCTGGACATCTATTTTGGGACTTTAAGATAAACATCTTAGGTGAAAAGGATGATACACCAGTTCATTTCTGTGACAAATGTGGACTGCCTATTAAAATCTATGGGCGAATGATTCCATGCAAACATGTTTTTTGCTATGACTGTGCTATTTTACATGAAAAAAAGGGAGACAAAATGTGTCCGGGCTGTAGTGATCCTGTGCAGCGAATTGAACAGTGTACACGAGGTTCTCTCTTCATGTGTAGCATTGTTCAAGGGTGCAAGAGAACGTATTTGTCTCAGAGAGACTTACAGGCTCATATCAACCATCGCCACATGAGAGCTGGAAAACCTGTTACCCGGGCTTCGCTTGAAAATGTTCATCCTCCTATTGCCCCACCACCAGCTGAAATCCCTGAGCGCTTTATAATGCCACCAGACAAGCACCATATGAGCCATATTCCGCCAAAGCAGCACATCATGATGCCACCACCTCCTTTGCAGCATGTGCCACATGAGCACTACAATCAGCCACATGAGGATATTCGTGCTCCTCCAGCAGAATTGTCCATGGCTCCACCACCACCTCGTTCGTTTACTGAAGATCAAGGAACTCTCAGCCCTCCATTTACACAACCAGGGGGAATGAGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTCCTCCACGAATGCAGGGTCCGCCTTCTCAAACCCCACTTCCTGGACCACATCATCCAGATCAGACAAGATATAGACCGTATTACCAATGA

Related Sequences

XP_004839713.1 Protein

Cbll1 PREDICTED: E3 ubiquitin-protein ligase Hakai isoform X4 [Heterocephalus glaber]

Length: 332 aa      
>XP_004839713.1
MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRAQRTINRMPAKAPTGFDYNEEERYDCKGGELFGNQRRFPGHLFWDFKINILGEKDDTPVHFCDKCGLPIKIYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPVTRASLENVHPPIAPPPAEIPERFIMPPDKHHMSHIPPKQHIMMPPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRMQGPPSQTPLPGPHHPDQTRYRPYYQ