Details from NCBI annotation

Gene Symbol Lsmem1
Gene Name leucine-rich single-pass membrane protein 1
Entrez Gene ID 101719438

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSMEM1 ENSCPOG00000004797 (Guinea pig)

Gene Details

leucine-rich single-pass membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004317, Guinea pig)

Protein Percentage 93.75%
CDS Percentage 90.1%
Ka/Ks Ratio 0.08599 (Ka = 0.0306, Ks = 0.3561)

LSMEM1 ENSG00000181016 (Human)

Gene Details

leucine-rich single-pass membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000323304, Human)

Protein Percentage 86.72%
CDS Percentage 88.8%
Ka/Ks Ratio 0.23944 (Ka = 0.0697, Ks = 0.2911)

Lsmem1 ENSMUSG00000071342 (Mouse)

Gene Details

leucine-rich single-pass membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093434, Mouse)

Protein Percentage 77.34%
CDS Percentage 78.91%
Ka/Ks Ratio 0.19078 (Ka = 0.1471, Ks = 0.7708)

Lsmem1 ENSRNOG00000039110 (Rat)

Gene Details

leucine-rich single-pass membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056569, Rat)

Protein Percentage 82.35%
CDS Percentage 83.14%
Ka/Ks Ratio 0.16335 (Ka = 0.1027, Ks = 0.629)

Genome Location

Sequence Coding sequence

Length: 468 bp    Location: 17440088..17427457   Strand: -
>XM_004839623.1
ATGACCCCCAAAGCCTCGTGTCAAAGCAGCGGTTTCCAGTCCTCCAATCTTTGGGAACCAGACCAGATCACAGGAGGGACAATGAATCATTCTTTCCAGGACACTGGCTCTTGTGGCATACATGAAGATGGAAAGCTGTATGTCGTGGATTCCATAAATGACCTAAACAAACTGAACCTCTGTCCTGTGGGATCACAGCATCCGTTCCCCCTAGACGAGAAAGCCCCAGGTCTTGGCACCAACTCCGGAAATGGAAGCCGGAGTCTGTTTTTTGTGGGGCTGCTAATTGTCCTGCTTGTCAGCCTGACACTGGTTTTCTTCGTGATATTTCTAATAATTCAGACTGCAAACAAGATGGAGGATGTGTCGAGACGATTAGCAGCCGAAGGAAAGGACATAGATGATCTTAAGAAAATCAACAATATGATCATAAAGCGACTCAACCAACTGGATTCTGAACAGAACTAA

Related Sequences

XP_004839680.1 Protein

Lsmem1 PREDICTED: leucine-rich single-pass membrane protein 1 [Heterocephalus glaber]

Length: 155 aa      View alignments
>XP_004839680.1
MTPKASCQSSGFQSSNLWEPDQITGGTMNHSFQDTGSCGIHEDGKLYVVDSINDLNKLNLCPVGSQHPFPLDEKAPGLGTNSGNGSRSLFFVGLLIVLLVSLTLVFFVIFLIIQTANKMEDVSRRLAAEGKDIDDLKKINNMIIKRLNQLDSEQN