Details from NCBI annotation

Gene Symbol Scin
Gene Name scinderin, transcript variant X2
Entrez Gene ID 101718855

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCIN ENSCPOG00000005589 (Guinea pig)

Gene Details

scinderin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005035, Guinea pig)

Protein Percentage 92.17%
CDS Percentage 91.65%
Ka/Ks Ratio 0.16752 (Ka = 0.0418, Ks = 0.2493)

SCIN ENSG00000006747 (Human)

Gene Details

scinderin

External Links

Gene Match (Ensembl Protein ID: ENSP00000297029, Human)

Protein Percentage 90.73%
CDS Percentage 88.46%
Ka/Ks Ratio 0.11379 (Ka = 0.0479, Ks = 0.4212)

Scin ENSMUSG00000002565 (Mouse)

Gene Details

scinderin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002640, Mouse)

Protein Percentage 91.06%
CDS Percentage 87.59%
Ka/Ks Ratio 0.08643 (Ka = 0.0443, Ks = 0.512)

Scin ENSRNOG00000004498 (Rat)

Gene Details

scinderin (Scin), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005988, Rat)

Protein Percentage 90.57%
CDS Percentage 86.67%
Ka/Ks Ratio 0.08042 (Ka = 0.0469, Ks = 0.5827)

Genome Location

Sequence Coding sequence

Length: 1848 bp    Location: 17384063..17303805   Strand: -
>XM_004839622.1
ATGGCACAGGAGCTGCACCACCCCGAGTTCGCCCGCGCCGGCAGGCAGGCGGGGCTGCAGATCTGGAGGATCGAGGAGCTGGAGCTGGTCCCGGTGCCCGAAGGCGCGCACGGCGACTTCTTCGTGGGCGACGCCTACGTGGTGCTGCACACCGCGCGGACCAGCCGGGGGTTCGCCTACCGCCTGCACTTCTGGCTGGGAAAGGAGTGCTCGCAGGATGAGAGCACGGCCGCTGCCATCTTCACCGTCCAGATGGACGACTACCTGGGAGGCAGGCCGGTGCAGAGCAGGGAGCTCCAGGGCTTCGAGTCCACAGACTTCGTGGGCTACTTCAAAGGAGGCCTGAAGTACAAGGCTGGAGGTGTGGCATCAGGACTCAACCATGTTCTCACCAACGACCTGTCGGCCCAGAGGCTCCTGCACGTGAAGGGGCGCAGAGTGGTCAGGGCCACTGAAGTTCCCCTCAGCTGGGACAGTTTCAACAAGGGCGACTGCTTCATCGTAGACCTTGGCTCTGAAATTTACCAGTGGTGTGGTTCCTCATGCAACAAATATGAGCGTCTGAAAGCAAGCCAGGTTGCCATTGGCATTCGAGACAATGAGAGGAAAGGAAGATCTCAGCTCATTGTGGTGGAAGAAGGAAGTGAACCTTTGGGACTTATTGAGGTTTTAGGGAAAAAGCCAGAGCTTCGTGATGGAGACAGTGATGATGACGCCATAGCAGACATCAGTAACAGGAAGATGGCGAAGCTGTACATGGTTTCAGATGCAAGTGGCTCCATGAAAGTGACGGTGGTGGCTGAAGAAAATCCCTTCACAATGGCAATGCTGCTTTCTGAAGAATGCTTTATTTTGGACCATGGTGCTGCAAAACAAATTTTTGTATGGAAAGGTAAAGATGCTAATCCCGAAGAGAGGAAGGCTGCAATGAAGACAGCAGAAGAATTTCTACAGCAAATGAATTACTCCACCAATACTCAAATTCAGGTTCTTCCAGAAGGAGGTGAGACACCAATCTTCAAACAGTTTTTTAAAGACTGGAAAGATAAAGATCAGAGTGATGGCTTTGGGAAAGTTTATGTCACAGAGAAAGTGGCTCGAATAAAACAAATTCCATTTGATGCCTCAAAGTTACACAGTTTTCCGGAGATGGCAGCCCAGCACAATATGGTGGATGATGGTTCTGGCAAAGTGGAGATTTGGCGTGTAGAAAGCAATGGTAGAATTGAAATTGACCCAAACTCCTATGGTGAGTTCTATGGTGGTGACTGCTACATTATCCTCTACACTTATCCCAGGGGGCAGATCATCTACACGTGGCAGGGAGCAAATGCCACACGAGATGAACTGACCATGTCTGCGTTCCTGACTGTCCAGTTGGATCGGTCCCTGGGAGGGCAGGCTGTGCAGGTCCGAGTCTCCCAAGGCAAAGAGCCTGCTCACCTGCTGAGTTTGTTCAAAGACAAACCACTCATTGTTTACAAGAATGGGACATCCAAGAAAGGCGGACAGGCCCCGGCTCCGCCTGTGCGCCTCTTTCAAGTCCGGAGAAACCTGGCATCTGTTACCAGGATTGTGGAGATTGAGGAGGTTCCAGGAGAGTTCACCCAGGATGACTTAGCAGAGGATGACGTTATGCTACTAGATGCTTGGGAACAGATATTTATTTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAACAGAATCACTGAAGTCTGCCAAAATGTACCTTGAGACAGATCCTTCTGGAAGAGATAAGAAGACTCCAATTGTCATCATAAAACAGGGACATGAGCCACCCACATTCACAGGCTGGTTTCTGGGCTGGGATTCCAGTAGGTGGTAA

Related Sequences

XP_004839679.1 Protein

Scin PREDICTED: adseverin-like isoform X2 [Heterocephalus glaber]

Length: 615 aa      View alignments
>XP_004839679.1
MAQELHHPEFARAGRQAGLQIWRIEELELVPVPEGAHGDFFVGDAYVVLHTARTSRGFAYRLHFWLGKECSQDESTAAAIFTVQMDDYLGGRPVQSRELQGFESTDFVGYFKGGLKYKAGGVASGLNHVLTNDLSAQRLLHVKGRRVVRATEVPLSWDSFNKGDCFIVDLGSEIYQWCGSSCNKYERLKASQVAIGIRDNERKGRSQLIVVEEGSEPLGLIEVLGKKPELRDGDSDDDAIADISNRKMAKLYMVSDASGSMKVTVVAEENPFTMAMLLSEECFILDHGAAKQIFVWKGKDANPEERKAAMKTAEEFLQQMNYSTNTQIQVLPEGGETPIFKQFFKDWKDKDQSDGFGKVYVTEKVARIKQIPFDASKLHSFPEMAAQHNMVDDGSGKVEIWRVESNGRIEIDPNSYGEFYGGDCYIILYTYPRGQIIYTWQGANATRDELTMSAFLTVQLDRSLGGQAVQVRVSQGKEPAHLLSLFKDKPLIVYKNGTSKKGGQAPAPPVRLFQVRRNLASVTRIVEIEEVPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKTESLKSAKMYLETDPSGRDKKTPIVIIKQGHEPPTFTGWFLGWDSSRW