Sequence details NCBI ID: XM_004839593.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ahr
Gene Name aryl hydrocarbon receptor, transcript variant X4
Entrez Gene ID 101708722

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AHR ENSCPOG00000005481 (Guinea pig)

Gene Details

Cavia porcellus aryl-hydrocarbon receptor (Ahr), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004936, Guinea pig)

Protein Percentage 83.39%
CDS Percentage 88.56%
Ka/Ks Ratio 0.41274 (Ka = 0.0946, Ks = 0.2292)

AHR ENSG00000106546 (Human)

Gene Details

aryl hydrocarbon receptor

External Links

Gene Match (Ensembl Protein ID: ENSP00000242057, Human)

Protein Percentage 79.0%
CDS Percentage 84.83%
Ka/Ks Ratio 0.30236 (Ka = 0.117, Ks = 0.387)

Ahr ENSMUSG00000019256 (Mouse)

Gene Details

aryl-hydrocarbon receptor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112137, Mouse)

Protein Percentage 71.21%
CDS Percentage 76.22%
Ka/Ks Ratio 0.22166 (Ka = 0.1766, Ks = 0.7967)

Ahr ENSRNOG00000004342 (Rat)

Gene Details

aryl hydrocarbon receptor (Ahr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006618, Rat)

Protein Percentage 71.17%
CDS Percentage 75.59%
Ka/Ks Ratio 0.21455 (Ka = 0.1801, Ks = 0.8393)

Genome Location

Sequence Coding sequence

Length: 2481 bp    Location: 12981383..12941483   Strand: -
Raw sequence   
>XM_004839593.1
ATGAGGACATTCAGAGTAAAACCAATCCCGGCCGAAGGAATCAAGTCAAATCCTTCCAAGCGACATAGAGATCGACTTAATACAGAGTTGGATCGTCTGGCTAGCCTGCTGCCTTTCCCGCAAGATGTTATTAATAAGCTGGACAAACTTTCAGTTCTTAGGCTCAGTGTCAGTTACCTGAGAGCTAAAAGCTTCTTTGACGTTGCATTAAAATCCTCTGCTGACAGAAATGGAGGCCAGGATAACCGCAGAGCATGGTTCAGAGATGGCCTGGATTTGCAAGAAGGAGAATTTTTCTTACAGGCTCTGAATGGCTTTGTATTGGCTGTCACTACAGATGCTTTGGTCTTTTATGCGTCTTCAACTATACAAGATTACTTGGGCTTTCAGCAATCTGATGTCATACATCAGAGTGTATATGAATTTATCCATACTGAAGATCGAGCTGAATTTCAGCATCAGCTCCATTGGGCATTCAACTCACAAGATACAGACTCTGGACAAGCAATTCATGAACCTCATGGTCTCTCACAGCCAGGAGTCTCTTATATCCCAGACCAGATTCCTCCAGAAAACTCTTCTTTTATGGAGAGGTGCTTCATATGCCGACTAAGGTGTTTGCTGGATAATTCATCTGGCTTTCTGGCAATGAAATTCCAAGGAAGGTTAAAGTATCTTCATGGACAGAACAAGAAAGGGAAAGATGGATCAATACTTCCTCCTCAGCTGGCTTTGTTTGCTATAGCCACTCCACTTCAGTCACCATCCATACTTGAAATTCGAACCAAAAATCTCATTTTTAGAACCAAACACAAACTGGATTTTACACCTATTGGTTGTGATGCCAAAGCCCAGATTGTTTTAGGTTACACTGAAGCAGAACTGTGCTCAAGAGGATCGGGATATCAGTTTGTTCATGCTGGGGATATGCTTTACTGTGCCGAATCCCATATCCGGATGATGAAGACTGGAGAAAGTGGCATGACAGTTTTCAGGCTTCTTCTGAAACATAACCGGTGGGCTTGGATACAGTCCAATGCACGTGTAGTCTATAAAAATGGAAGACCGGATTATATCATTGCAACTGTACGAGCTCTGACAGATGAAGAAGGAAGAGAGCATTTACAAAAACGCAATATGTCATTCCCTTTTATGTTTACCACTGGAGAAGCTGTGTTGTACGAGACCAGCAACACTTTTCCTCCTATGATGGATCCCTTACCAATACGGACTAAAAGCAGCACTAGTGGACAAGACTCTGCTACCAAATCAACTGAGAATAAGGATTCCCTTCATCCCAGTTCCCTCTTGGCTGCTGTGATGCCACAAGATGAGTCTATTTATCATTACCCTGCTTCAAATACTGCACCTTTTCAAACAAATTTTTTTAACGATTCTGTGATTGAATGCAGTAATTGGCAAGAGAATATTGTACCACTGGGATGTGATAATATCCCCAAACATAGACAAATTGGACAGTCTCAGGAGATGAACCCAGTGTTCTCTGGAAGTCATGCAGGGCCCTTTCCAGATAATAAAAATAGTGAATTGTACAGCATTATGAAAAACCTAGGCATTGATTTTGAAGATATCAAGCGCATGCAGAATGAGGAATTTTTCAGGACTGACATGTCTGGTGAGGTTGACTTCAGAGACATAGACATAAGGGATGAAATACTGACATATGTCCAAGATTCTTTAAGTAAGTCTTCATTCCTGAGTTCAGAGTACGAACAGCAACAGGCTGTGACCCTGAATTCAAGCTGTATGGTACAAGAACAGCTAGAGTTAGAACAGCAGCAGCTTCAGCACCATGAAAAGCAAATAGTAGTGGAAGCACAGCAACAACTGTGTCAGAAAATGAAACATATGCAAGTTAATGGCCTGCTTAGGAATTGGAGCTCTAACCCATCCATGCCTTTCAGTTGTCCTCAGCAAGACCTTCAACAGTATAGTGTGTTTCCAGACTTAAATGGGGAGAATCCAGAGTTTCCCTGCAAATCTGAGCTGGACACCATGCCTTATACACAGAACATTGTTCCCTGTGACCAGTCTGTCTTACCCCAGCATTCCAAATGTACACAGTTAGAATTTCCCATAGGGAATTTTGAACCATCCCTATACCCTACAACTTCTAATGTAGAAGATTTTGTCACTTGTTTACAAGTTTCTGAAAACCAAAGACATGGAATAAATCTACAGTCCACCATAGTAACTCCTCAGACATGTTATACTGGGGCCATGTCAACATATCAGTGCCAACCAGAACCTCAGCACACCCATGTGGATCAGATGCAGTACAATCCAGCAATTCCAGGTCCACAGGCATTTGTAAACAAGAATGGAGGAGTTTTAAATGACATGTACCCTGCTCAATTAAGTAACATAAGTAACACTCAGACTGCCACACATCTTCAGCCACTTCATCATCCAGCAGAAACCAGACCTTTCCCTGACTTGACACCCAGTGGATTCCTATAA

Related Sequences

XP_004839650.1 Protein

Ahr PREDICTED: aryl hydrocarbon receptor isoform X4 [Heterocephalus glaber]

Length: 826 aa      View alignments
>XP_004839650.1
MRTFRVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSADRNGGQDNRRAWFRDGLDLQEGEFFLQALNGFVLAVTTDALVFYASSTIQDYLGFQQSDVIHQSVYEFIHTEDRAEFQHQLHWAFNSQDTDSGQAIHEPHGLSQPGVSYIPDQIPPENSSFMERCFICRLRCLLDNSSGFLAMKFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQSPSILEIRTKNLIFRTKHKLDFTPIGCDAKAQIVLGYTEAELCSRGSGYQFVHAGDMLYCAESHIRMMKTGESGMTVFRLLLKHNRWAWIQSNARVVYKNGRPDYIIATVRALTDEEGREHLQKRNMSFPFMFTTGEAVLYETSNTFPPMMDPLPIRTKSSTSGQDSATKSTENKDSLHPSSLLAAVMPQDESIYHYPASNTAPFQTNFFNDSVIECSNWQENIVPLGCDNIPKHRQIGQSQEMNPVFSGSHAGPFPDNKNSELYSIMKNLGIDFEDIKRMQNEEFFRTDMSGEVDFRDIDIRDEILTYVQDSLSKSSFLSSEYEQQQAVTLNSSCMVQEQLELEQQQLQHHEKQIVVEAQQQLCQKMKHMQVNGLLRNWSSNPSMPFSCPQQDLQQYSVFPDLNGENPEFPCKSELDTMPYTQNIVPCDQSVLPQHSKCTQLEFPIGNFEPSLYPTTSNVEDFVTCLQVSENQRHGINLQSTIVTPQTCYTGAMSTYQCQPEPQHTHVDQMQYNPAIPGPQAFVNKNGGVLNDMYPAQLSNISNTQTATHLQPLHHPAETRPFPDLTPSGFL