Sequence details NCBI ID: XM_004839580.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Twistnb
Gene Name TWIST neighbor, transcript variant X2
Entrez Gene ID 101704623

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TWISTNB ENSCPOG00000025319 (Guinea pig)

Gene Details

TWIST neighbor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017183, Guinea pig)

Protein Percentage 93.0%
CDS Percentage 90.0%
Ka/Ks Ratio 0.11515 (Ka = 0.0374, Ks = 0.325)

TWISTNB ENSG00000105849 (Human)

Gene Details

TWIST neighbor

External Links

Gene Match (Ensembl Protein ID: ENSP00000222567, Human)

Protein Percentage 82.99%
CDS Percentage 85.57%
Ka/Ks Ratio 0.29194 (Ka = 0.1066, Ks = 0.3651)

Twistnb ENSMUSG00000020561 (Mouse)

Gene Details

TWIST neighbor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020877, Mouse)

Protein Percentage 77.51%
CDS Percentage 81.36%
Ka/Ks Ratio 0.23735 (Ka = 0.1357, Ks = 0.5718)

Twistnb ENSRNOG00000010750 (Rat)

Gene Details

TWIST neighbor (Twistnb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014373, Rat)

Protein Percentage 77.26%
CDS Percentage 81.41%
Ka/Ks Ratio 0.22096 (Ka = 0.1312, Ks = 0.5936)

Genome Location

Sequence Coding sequence

Length: 1014 bp    Location: 10905013..10913146   Strand: +
Raw sequence   
>XM_004839580.1
ATGGCTGCTGGTCCCTCCGAGGCGCTGCTGCCCGAGGGGGCCTCGGAAGGGCGAGTGGTAGGACCGGCCGGCCCCCTTCCTTGCCTGGAGCTGCCGACCTATGCTGCTGCTTGTGCGCTGGTGAACAGCCGCTACTCGTGCCTTGTGGCTGGGCCACACAGAAGGCACATCGCCCTGTCGCCCCGCTATCTCAACCGGAAACGCACCGGGATCCGAGAGCAGCTAGATGCAGAGCTCTTGCGCTATTCCGAGAGCCTTTTAGGTGTCCCTGTTGCGTATGATAACATCAAAGTTGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACATATTCATCTTAACATTGAAGCAGATTTTGTTGTTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTATAGTTAATAAAGTGTCTTCTAGCCACATTGGCTGTCTAGTACATGGATGTTTTAATGCCTCCATTCCTAAGCCTGAGCAAATGTCAGCTGAGCAGTGGCACACTGTGGAGGTAAACGTGGGTGATGAACTAGAATTTGAAGTATTTCGTCTAGACTCAGATGCTGCTGGAGTATTCTGCATTCGAGGAAAACTAAGCATCACTAGTTTACAATCCAAGTGCTTTGAAATTTCTGAAGAAGTAGCAGAAACTGTCACAAAGGAGGCTGTTGAAAAAATTCCAAAGAAGAAAAAGAAAAAGAAGAAAGCCCCAGAAATAGATGAAATGGATGTCAGTGTAACAGAACTAGCAGATATAATAGATGTGACTCCAAAAGAAGAGGAAGACCTGCAGATTAGTAATAACGTAAATGACCTCTGGGAGGAAGAGCCAAAGAAGAAAAAAAAGAAGAAAAAGCACCAGGAGTATCAGGATCAGGACCCTGTTTTCCAAGGCAGTGACTCCAGTGGTTACCAAAGTGACCATAAAAAGAAAAAAAAGAAAAGAAAACACGGTGAAGAGGCTGAACTTACCCCAGTTCTGGAATGCTCACCTAAGAAGAAAAAAAAAAAGTAA

Related Sequences

XP_004839637.1 Protein

Twistnb PREDICTED: DNA-directed RNA polymerase I subunit RPA43 isoform X2 [Heterocephalus glaber]

Length: 337 aa      View alignments
>XP_004839637.1
MAAGPSEALLPEGASEGRVVGPAGPLPCLELPTYAAACALVNSRYSCLVAGPHRRHIALSPRYLNRKRTGIREQLDAELLRYSESLLGVPVAYDNIKVVGELGDIYDDQGHIHLNIEADFVVFCPEPGQKLMGIVNKVSSSHIGCLVHGCFNASIPKPEQMSAEQWHTVEVNVGDELEFEVFRLDSDAAGVFCIRGKLSITSLQSKCFEISEEVAETVTKEAVEKIPKKKKKKKKAPEIDEMDVSVTELADIIDVTPKEEEDLQISNNVNDLWEEEPKKKKKKKKHQEYQDQDPVFQGSDSSGYQSDHKKKKKKRKHGEEAELTPVLECSPKKKKKK