Details from NCBI annotation

Gene Symbol Rapgef5
Gene Name Rap guanine nucleotide exchange factor (GEF) 5, transcript variant X2
Entrez Gene ID 101700232

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAPGEF5 ENSCPOG00000003046 (Guinea pig)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002760, Guinea pig)

Protein Percentage 96.17%
CDS Percentage 94.35%
Ka/Ks Ratio 0.1086 (Ka = 0.0191, Ks = 0.176)

RAPGEF5 ENSG00000136237 (Human)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000343656, Human)

Protein Percentage 94.25%
CDS Percentage 92.51%
Ka/Ks Ratio 0.12363 (Ka = 0.0283, Ks = 0.2291)

Rapgef5 ENSMUSG00000041992 (Mouse)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105313, Mouse)

Protein Percentage 92.07%
CDS Percentage 87.87%
Ka/Ks Ratio 0.09176 (Ka = 0.0426, Ks = 0.4646)

Rapgef5 ENSRNOG00000005271 (Rat)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 5 (Rapgef5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007112, Rat)

Protein Percentage 87.93%
CDS Percentage 83.91%
Ka/Ks Ratio 0.13949 (Ka = 0.0829, Ks = 0.594)

Genome Location

Sequence Coding sequence

Length: 2196 bp    Location: 8388441..8614469   Strand: +
>XM_004839568.1
ATGGCCATAGGGGTCTGGCAGCTCCTATTGGACATGGGGATCATGTCATCAGTGGACCAGCACCTCTACTTTCAAGATAATTATGTTTTCTATCAGTTTTCATCTGATGAATGTAGCTACTTGTACTGTGAATTTGAAAGAGAAGAAGAATGGCAAAATGGTGTCAAACTTCTGCTACAGCTTGTGCCTCTCGTTCCTGCCAGAGCTGGCATCTGTGAACTGTCTCATCAGAAAATTGAAGATTCTGAAGAAAGCAGTGATGAAATCTTTGCTCGCCTAACATCTGCGGTGCAGAGAGAGCTAGCAGCTGTTATTGCTTTGAAAGCAAGGAAGTCTGCACTTGAACAAGATGATGAAAACAATGACAAACATGTATCTGTAACAGAAGCTGAAGGTGTTCCAGATTCTCAGGCTGGGGTGATGTGCAAGCTTCAAGAGAGAGATGACGTTGGACGCATTGAACTGGTCCAGAAGCTGGCGAGAGAACACTGTCAGTTTTTGCAGACAGACAAAAAAGAACCGGAGAAGTCTGAACATCAAGATGATGAAGTGACGACTCTTCAGGTTAAAGAGCAGGACCAGACCATCCTGGTGCTGAGGAAAGCGCAGGGCTGTGGCCCAGCCCCCGCAGCTGGGGGCGCGGAGAGCGATTGGAGATACGTGGTGGTATCCGGGACCCCGGAGAAGATCCTGGAGCACCTTTTGAATGACTTGCACCTGGAGGAAGTCCAGGACAAAGAAACAGAGACCCTCCTCGATGATTTCCTTCTCACGTACACTGTCTTCATGACGACTGATGACTTGTGCCAAGCACTCTTAAGGCACTATTCTGCTAAAAAGTATCAAGGCAAAGAAGAAAATTCAGATGTTCCTTGTAGGAAACGTAAAGTTTTGCATCTGGTTTCCCAATGGATTGCTCTATACAAAGACTGGCTACATGAGGATGAACATTCAAAAATGTTTTTAAAGACCATATATAGGAATGTCCTGGATGATGTCTATGAATATCCAATACTTGAAAAAGAGCTAAAAGAATTTCAAAAGATACTTGGAATGCATCGTCGTCACACCGTAGATGAATATTCACCACAAAGGAAGAATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGGCGGAAACAGAGGAAATTTTTTGCCACGTGTATATAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAGGTTTCCAGTACAGCCCAGGAGATCCTGAAGGTCGTAGCAGAAAAGATCCAACATGCAGAAGAAGATCTGGCTCTGGTGGCCATCATGTTCTCTGGGGAAAAGCATGAGCTTCAGTCAAATGATTTGGCCATCTCCAAATCCTTTGAGGCCTCTGGTCGGATATATGTCTACCGGAAGGACCTGGCGGACACATTGAACCCCTTTGCAGAAAATGAGGAATCACAGCAAAGGTCGATGAGAATTTTGGGAATGAACACTTGGGATCTTGCTCTGGAATTAATGAGTTTTGATTGGAGTCTCTTCAATTCAATTCACGAGCAAGAGCTGATCTACTTCACATTCAGCAGACAGGGAAGCGGGGAACACACTGTAAACCTCAGCCTCCTGCTCCAGAGATGCAACGAAGTCCAGCTCTGGGTGGCCACAGAGATTCTCCTTTGCACCCAGCTGGGCAAGCGAGTGCAGCTGGTGAAAAAATTCATCAAAATCGCAGCTCACTGCAAAGCCCAGAGAAACCTGAATTCTTTCTTTGCTATTGTGATGGGTCTCAACACTGCTTCAGTCAGCCGACTGTCACAGACCTGGGAGAAAATTCCTGGGAAGTTTAAGAAACTTTTCTCTGAGCTTGAAAGTTTAACAGATCCTTCCTTAAATCACAAAGCCTACAGAGATGCATTCAAAAAGATGAAGCCGCCAAAAATCCCTTTCATGCCCTTATTGCTTAAAGATGTAACATTTATTCATGAAGGAAATAAAACATTTTTGGATAATCTTGTCAATTTTGAAAAACTGCACATGATTGCAGACACTGTGCGAACCCTGAGACACTGCAGGACTAACCAGTTTGGAGGTGACATGTCTCCAAAGGAGCATCAGGAGCTGAAGTCCTACGTTACCCACCTGTATGTCATCGACAGCCAGCAGGCCCTGTTCGAGCTCTCCCACAGGCTCGAGCCTCGGGCCTGA

Related Sequences

XP_004839625.1 Protein

Rapgef5 PREDICTED: rap guanine nucleotide exchange factor 5 isoform X2 [Heterocephalus glaber]

Length: 731 aa      View alignments
>XP_004839625.1
MAIGVWQLLLDMGIMSSVDQHLYFQDNYVFYQFSSDECSYLYCEFEREEEWQNGVKLLLQLVPLVPARAGICELSHQKIEDSEESSDEIFARLTSAVQRELAAVIALKARKSALEQDDENNDKHVSVTEAEGVPDSQAGVMCKLQERDDVGRIELVQKLAREHCQFLQTDKKEPEKSEHQDDEVTTLQVKEQDQTILVLRKAQGCGPAPAAGGAESDWRYVVVSGTPEKILEHLLNDLHLEEVQDKETETLLDDFLLTYTVFMTTDDLCQALLRHYSAKKYQGKEENSDVPCRKRKVLHLVSQWIALYKDWLHEDEHSKMFLKTIYRNVLDDVYEYPILEKELKEFQKILGMHRRHTVDEYSPQRKNKALFHQFSLKENWLQHRGTVAETEEIFCHVYITEHSYVSVKAKVSSTAQEILKVVAEKIQHAEEDLALVAIMFSGEKHELQSNDLAISKSFEASGRIYVYRKDLADTLNPFAENEESQQRSMRILGMNTWDLALELMSFDWSLFNSIHEQELIYFTFSRQGSGEHTVNLSLLLQRCNEVQLWVATEILLCTQLGKRVQLVKKFIKIAAHCKAQRNLNSFFAIVMGLNTASVSRLSQTWEKIPGKFKKLFSELESLTDPSLNHKAYRDAFKKMKPPKIPFMPLLLKDVTFIHEGNKTFLDNLVNFEKLHMIADTVRTLRHCRTNQFGGDMSPKEHQELKSYVTHLYVIDSQQALFELSHRLEPRA