Details from NCBI annotation

Gene Symbol Gpnmb
Gene Name glycoprotein (transmembrane) nmb, transcript variant X1
Entrez Gene ID 101726702

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPNMB ENSCPOG00000015064 (Guinea pig)

Gene Details

glycoprotein (transmembrane) nmb

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013578, Guinea pig)

Protein Percentage 81.64%
CDS Percentage 87.28%
Ka/Ks Ratio 0.37281 (Ka = 0.1025, Ks = 0.2751)

GPNMB ENSG00000136235 (Human)

Gene Details

glycoprotein (transmembrane) nmb

External Links

Gene Match (Ensembl Protein ID: ENSP00000371420, Human)

Protein Percentage 75.4%
CDS Percentage 81.24%
Ka/Ks Ratio 0.33282 (Ka = 0.1533, Ks = 0.4607)

Gpnmb ENSMUSG00000029816 (Mouse)

Gene Details

glycoprotein (transmembrane) nmb

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031840, Mouse)

Protein Percentage 71.33%
CDS Percentage 77.76%
Ka/Ks Ratio 0.29891 (Ka = 0.1854, Ks = 0.6202)

Gpnmb ENSRNOG00000008816 (Rat)

Gene Details

glycoprotein (transmembrane) nmb (Gpnmb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011945, Rat)

Protein Percentage 70.09%
CDS Percentage 77.64%
Ka/Ks Ratio 0.31228 (Ka = 0.1908, Ks = 0.6109)

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location: 7386861..7358824   Strand: -
>XM_004839559.1
ATGGAAAGTCTCCACAGGATCCTGGGATTTCTGCTGCTGGCTACAAGACTGCCCCTTGATTCCACCAAACGGTTTCATGATGTGCTGGGCAATGAAAGGTATCCTGGTTATATGCGGGAGCACAACCAGTTACATGGCTGGTCTTCTGATGAAAATGACTGGGATGAAAAACTCTATCCAGTGTGGAAGAGAGGAGATCCAAGGTGGAAAAGCTCCTGGAAAGGAGGCCATGTGCAAGCGGTCCTGACCAGTAATTCCCCAGCACTGGTGGGCTCAAACATCACATTTGCAGTGAACCTCGTGTTCCCCAGATGCCAAAAGGAAGATGCCAATGGCAACATAGTCTATGAGAAGAACTGCAGAAACGACTCTAGACTGTCTCCGGACCTGTACGTTTACAACTGGACAGCAGCCTGGTCAGAGGACAGCGACTGGGGCCCCGGCCCCGACGGCCACCACGTGTTCCCCGACGGCAAGCCGTTCCCCCGCCCCCACGGGTGGAGGAAGTGGAATTTTGTCTACGTCTTTCACACGCTTGGTCAGTATTTCCAGAAACTGGGACGGTGTTCGGTAAGAATGTCTATGAACACAGCCAACCTGACACTTGGCCCTCAGGTCATGGAGGTGACTGTCTACAGAAGACACGGCTGGGCATACATTCCTATCGCACAAGTTAGAGATGTGTACGTGTTAACAGATCAGATTCCTATATTTGTGACCATGTTCCAGAAGAATGATCGAAATGTGTCTGATGAAACCTTTCTCAGAGACCTCCCCATTATATTTGACGTCCTGATTCATGATCCCAGCCACTTCCTCAATGAGTCTTCCATTTTCTACAAGTGGAACTTTGGGGACAACACCGGCCTGTTTGTTTCTAACAATCACACTTTGAATCACACCTACGTGCTCAATGGAACCTTCAACCTTAATCTCACTGTGCAAGCTTCAGTGCCCGGACCTTGTCCATCACCTTCCACACTTCCAAAGCCTTCCCCTTCTTCAGTAACTATTTTTAAAATATCTTACTATTCAAACACTCCAGTGCCTGCTGGTGACAGCCCCCTGGAGCTGAGCGAGATTCCTGATGAAAACTGCCAGATTAACAGATATGGTTACTTTGAAGCCACCCTCACGATTGTAGAGGGAATCCTAGAGATTAACATCATTCAGATAGCAGATGTCCCGAGCCCTGAGCTTCAGCCTGACAACTCCCTGATGGACTTCACTGTGACCTGCGAGGGCATCATCCCCAGGGAAGTCTGTACCATCATCTCTGACCCCGCCTGCCAGCTTGCCCAGGACATGGTCTGCAACAGCGTGGATGTGGACGAATGCCTGGTGACCGTGAGAAGAGCCTTCAAAGGCTCTGGGATGTACTGTGTAAACTTCACTCTGGGTGACAACACAAGTCTGGCCCTCACTAGCACCCTGGTCTCCGTTGCTAGCAAAGACCCAGCCTCCCCTTTCAGGATGACAAATGCTGCCCTGATCTCAGGTGGCTGCTTGGCCGTCATCGTCACCGTGATCGCCGTCCTGGTGCACAGAAAACACAAGGAATACAAACCAATTAAAAACAGTACTGAGAAGGTGCTCAAAAGCAAAGGCCTACATGTCGTCCTCAACGACACAAGGGCCGCATTCTTCCTGGGAAACCAGGAGACGAACCCACTGCTCAAGGACTACGCGGGAATTCTTTAA

Related Sequences

XP_004839616.1 Protein

Gpnmb PREDICTED: transmembrane glycoprotein NMB isoform X1 [Heterocephalus glaber]

Length: 566 aa      View alignments
>XP_004839616.1
MESLHRILGFLLLATRLPLDSTKRFHDVLGNERYPGYMREHNQLHGWSSDENDWDEKLYPVWKRGDPRWKSSWKGGHVQAVLTSNSPALVGSNITFAVNLVFPRCQKEDANGNIVYEKNCRNDSRLSPDLYVYNWTAAWSEDSDWGPGPDGHHVFPDGKPFPRPHGWRKWNFVYVFHTLGQYFQKLGRCSVRMSMNTANLTLGPQVMEVTVYRRHGWAYIPIAQVRDVYVLTDQIPIFVTMFQKNDRNVSDETFLRDLPIIFDVLIHDPSHFLNESSIFYKWNFGDNTGLFVSNNHTLNHTYVLNGTFNLNLTVQASVPGPCPSPSTLPKPSPSSVTIFKISYYSNTPVPAGDSPLELSEIPDENCQINRYGYFEATLTIVEGILEINIIQIADVPSPELQPDNSLMDFTVTCEGIIPREVCTIISDPACQLAQDMVCNSVDVDECLVTVRRAFKGSGMYCVNFTLGDNTSLALTSTLVSVASKDPASPFRMTNAALISGGCLAVIVTVIAVLVHRKHKEYKPIKNSTEKVLKSKGLHVVLNDTRAAFFLGNQETNPLLKDYAGIL