Sequence details NCBI ID: XM_004839539.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Osbpl3
Gene Name oxysterol binding protein-like 3, transcript variant X1
Entrez Gene ID 101718853

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OSBPL3 ENSCPOG00000007017 (Guinea pig)

Gene Details

oxysterol binding protein-like 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006329, Guinea pig)

Protein Percentage 94.02%
CDS Percentage 93.24%
Ka/Ks Ratio 0.15587 (Ka = 0.0302, Ks = 0.194)

OSBPL3 ENSG00000070882 (Human)

Gene Details

oxysterol binding protein-like 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000315410, Human)

Protein Percentage 91.54%
CDS Percentage 90.08%
Ka/Ks Ratio 0.13397 (Ka = 0.0431, Ks = 0.3213)

Osbpl3 ENSMUSG00000029822 (Mouse)

Gene Details

oxysterol binding protein-like 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110112, Mouse)

Protein Percentage 90.53%
CDS Percentage 85.96%
Ka/Ks Ratio 0.0852 (Ka = 0.0496, Ks = 0.582)

Osbpl3 ENSRNOG00000010011 (Rat)

Gene Details

Oxysterol-binding protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013828, Rat)

Protein Percentage 89.82%
CDS Percentage 85.38%
Ka/Ks Ratio 0.08654 (Ka = 0.0529, Ks = 0.611)

Genome Location

Sequence Coding sequence

Length: 2667 bp    Location: 5558143..5759074   Strand: +
Raw sequence   
>XM_004839539.1
ATGATGAGTGATGAGAAGAACCTCAGTGTGTCCCAAAAATTGGTCTCACCTTCAAGGAGCACAAGTAGCTGTTCCTCCAAGCAGGGAAGTCGACAGGACAGCTGGGAAGTGGTAGAAGGACTGAGGGGGGACATGACTTACACCCAGGAGCCTCCTGTTCAGAAAGGATTTTTGCTGAAAAAGCGGAAATGGCCCTTAAAAGGCTGGCACAAGAGATTCTTCTACCTGGACAAAGGAATCTTGAAATATGCCAAGAGCCAAGCCGATATAGAGAGAGAGAAGCTGCATGGCTGCATTGATGTGGGGCTGTCAGTGATGTCTGTAAAGAAGTCGTGCAAGTGCATCGACCTTGACACCGAGGAGCACATCTACCATCTGAAGGTGAAGTCAGAAGAAGTTTTTGATGAGTGGGTAGCCAAACTCCGGCACCACAGAATGTTTCGTCAGAATGAAATCGCCATGTTTCCACGAGAAGTGAATCACTTTTATCCAGGGTCTACCATCACAGATGCTGCACCGGGGGCATTTGACTCCATTTCCGGGAGGAAGCGTAGCAGTATATCAAAGCAGAACTCATTTCAAACTGGAAGCAATTTATCATTTTCTTGTGGTGGTGAGGCGAGAGTTCCATTATGGCTACAGTCTTCGGAGGACATGGAAAAATGTTCAAAAGACCTGACACAGTGCCATGCCTATCTGGTGGAGATGAGTCAGCTCCTGCAAAGCATGGACGTCCTGCATCGAACATACTCAGCGCCAGCAATCAATGCCATACAGGGTGGAGCTTTTGAAAGTCCCAAAAAGGAAAAAAGATTGCACAGGAGGTGGCGGTCCAGAGCTATTGGGAAAGATACTAAAGGAACACTGCAGGTCCCTAAACCTTTCTCTGGCCCTGTAAGACTACATTCCTCCAATCCTAATTTGTCAACACTAGATTTTGGAGAAGAGAAAAATTATTCTGATGGCTCTGAAACCTCATCAGAATTTTCTAAAATGCAAGAAGACCTGTGTCATATTGCACATAAAGTTTACTTCGCTTTAAGGTCAGCTTTTAATGCCGTATCGACGGAGAGAGAGAGACTGAAGCAGCTGATGGAGCAGGACGCCTCCTCCTCCCCTTCTGCTCAGACCGTTGGTCTGAAGCACGCTCTGTCATCCGCCATAGCGCAAAACACAGATCTTAAAGAACGCTTACGCAGAATCCATGCTGAATCTCTGCTCCTCGACCCGCCTGCTGTTGCCAAGTTGGGTGACAATCTGGCAGAGGAAAACTCCAGAGATGAAAATCGAGCTCTGGTCCATCAGCTTTCCAATGAAAGCAGGCTCTCTATCACTGACTCCCTTTCGGAATTTTTTGATGCACAGGAAGTACTGTTGTCTCCAAGCTCTTCAGAAAATGAGATTTCTGATGACGATTCATATGTCAGTGACATAAGTGATAACCTTTCCTTAGACAATCTTAGTAATGATTTAGATAATGAAAGACAAACCTTGGGGCCTCTTCTTGAGCGTGATGGGCGAGTGAGGTCCAAGAGAAGGACGTGCCTGCCCGCACCGGGTCCCAACACCAGCAACATCAGCCTGTGGAACATCCTTCGCAACAACATCGGGAAGGATCTGTCCAAGGTGGCCATGCCGGTGGAGTTGAACGAGCCCCTGAACATGCTGCAGCGGCTCTGTGAGGAGCTGGAGTACAGCGAGCTCCTGGACAAGGCAGCACGGATCCCTAACCCTCTGGAAAGGATGGTGTATGTGGCAGCCTTTGCCATATCCGCATATGCGTCCAGCTACTACCGAGCTGGGAGCAAGCCATTTAATCCAGTCCTTGGAGAAACGTACGAGTGTTTTCGAGAGGACAAGGGCTTCCAGTTTTTCGCAGAACAGGTCAGCCACCATCCACCTATCTCTGCGTGTCATGCTGAGTCTGGAAATTTTGTTTTCTGGCAAGATGTGAGATGGAAAAACAAATTCTGGGGCAAATCCATGGAAATTGTTCCAGTCGGCACAACCCATGTGACTCTCCCAGCCTTTGGAGATCACTTTGAGTGGAACAAGGTGACCTCTTGCATCCACAACATCTTAAGTGGGCAGAGGTGGATTGAGCACTATGGAGAGATTGTCATCAACAACCTGAATGATGATTCCTGCCACTGCAAAGTGAACTTCATAAAGGCAAAATACTGGAGCCCTAATGCCCACGAGATCGAAGGCACAGTATTCGACCGGAGTGGACAAGCAGTGCACCGGCTGTTTGGGAAGTGGCACGAGAGCATCTACTGCAGTGGCAGCTCCTCTTCATCCATGTGCATCTGGAGAGCAAATCCCATGCCAAAAGGCTATGAGCAATTTTATGGCTTCACACAGTTTGCATTAGAGTTGAATGAAATGGACCCCTTGTCAAAGTCTTTATTACCACCTACTGACACTCGATTTAGACCAGATCAAAGGTTTCTAGAAGAAGGAAACATAGAAGAAGCCGAAATACAAAAGCAAATGATTGAACAGCAGCAGAGAGAAAGGCGGCGGATCTTAGAAGAAAATAACATGGAACATCAGCCACGGTTTTTCAGGAAATCCAGTGATGACTCTTGGGTGAGCAATGGCACCTATTTAGAACTTAGAAAAGATTTTGGTTTTTCCAAATTGAACCATCCTGTCTTGTGGTGA

Related Sequences

XP_004839596.1 Protein

Osbpl3 PREDICTED: oxysterol-binding protein-related protein 3 isoform X1 [Heterocephalus glaber]

Length: 888 aa      View alignments
>XP_004839596.1
MMSDEKNLSVSQKLVSPSRSTSSCSSKQGSRQDSWEVVEGLRGDMTYTQEPPVQKGFLLKKRKWPLKGWHKRFFYLDKGILKYAKSQADIEREKLHGCIDVGLSVMSVKKSCKCIDLDTEEHIYHLKVKSEEVFDEWVAKLRHHRMFRQNEIAMFPREVNHFYPGSTITDAAPGAFDSISGRKRSSISKQNSFQTGSNLSFSCGGEARVPLWLQSSEDMEKCSKDLTQCHAYLVEMSQLLQSMDVLHRTYSAPAINAIQGGAFESPKKEKRLHRRWRSRAIGKDTKGTLQVPKPFSGPVRLHSSNPNLSTLDFGEEKNYSDGSETSSEFSKMQEDLCHIAHKVYFALRSAFNAVSTERERLKQLMEQDASSSPSAQTVGLKHALSSAIAQNTDLKERLRRIHAESLLLDPPAVAKLGDNLAEENSRDENRALVHQLSNESRLSITDSLSEFFDAQEVLLSPSSSENEISDDDSYVSDISDNLSLDNLSNDLDNERQTLGPLLERDGRVRSKRRTCLPAPGPNTSNISLWNILRNNIGKDLSKVAMPVELNEPLNMLQRLCEELEYSELLDKAARIPNPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECFREDKGFQFFAEQVSHHPPISACHAESGNFVFWQDVRWKNKFWGKSMEIVPVGTTHVTLPAFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVINNLNDDSCHCKVNFIKAKYWSPNAHEIEGTVFDRSGQAVHRLFGKWHESIYCSGSSSSSMCIWRANPMPKGYEQFYGFTQFALELNEMDPLSKSLLPPTDTRFRPDQRFLEEGNIEEAEIQKQMIEQQQRERRRILEENNMEHQPRFFRKSSDDSWVSNGTYLELRKDFGFSKLNHPVLW