Sequence details NCBI ID: XM_004839503.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hoxa11
Gene Name homeobox A11
Entrez Gene ID 101706429

Database interlinks

Part of NW_004624739.1 (Scaffold)

For more information consult the page for NW_004624739.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXA11 ENSCPOG00000011369 (Guinea pig)

Gene Details

homeobox A11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010219, Guinea pig)

Protein Percentage 98.88%
CDS Percentage 97.26%
Ka/Ks Ratio 0.08843 (Ka = 0.012, Ks = 0.1358)

HOXA11 ENSG00000005073 (Human)

Gene Details

homeobox A11

External Links

Gene Match (Ensembl Protein ID: ENSP00000006015, Human)

Protein Percentage 99.04%
CDS Percentage 96.79%
Ka/Ks Ratio 0.03285 (Ka = 0.0054, Ks = 0.1637)

Hoxa11 ENSMUSG00000038210 (Mouse)

Gene Details

homeobox A11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040920, Mouse)

Protein Percentage 97.44%
CDS Percentage 95.1%
Ka/Ks Ratio 0.0552 (Ka = 0.0125, Ks = 0.227)

Genome Location

Sequence Coding sequence

Length: 960 bp    Location: 3418723..3423950   Strand: +
Raw sequence   
>XM_004839503.1
ATGATGGATTTTGATGAGCGTGGTCCCTGCTCCTCTAACATGTATTTGCCAAGTTGTACTTACTACGTCTCGGGTCCAGATTTCTCCAGCCTCCCTTCTTTTCTGCCCCAGACCCCGTCTTCGCGCCCAATGACATACTCCTACTCCTCCAACCTGCCCCAGGTCCAACCCGTGCGCGAAGTGACCTTCAGAGAGTACGCCATTGAGCCCGCCACTAAATGGCACCCCCGCGGCAATCTGGCCCACTGCTACTCCGCGGAGGAGCTCGTGCACAGAGACTGCCTGCAGGCGCCCAGCGCGGCCGGCGTGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACCCCACCCCCGCCGTCTCGTCCAATTTCTATAGCACCGTGGGCAGGAACGGCGTCCTGCCGCAGGCTTTCGACCAGTTTTTCGAGACGGCCTACGGCACCCCGGAAAACCTCGCCTCCTCCTCCGACTACCCCGGGGACAAGAGCGCCGCGGAGAAGGGGCCCCCGGCGGCCACGGCGACCTCCGCGGCGGCGGCCTCGGCGGCGGCGGCCACTGGCGCGCCGGCAACTTCAAGTTCGGACGGCGGCGGCGGCGGCGGCGGCGGCTGCAGGGAGGCGGCGGCGGCCGAGGAGAAGGAGCGGCGGCGGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGCCGGCGGCCCCAGTGGGCAACGCACGCGAAAAAAGCGCTGCCCCTACACCAAGTACCAGATCCGAGAGCTGGAGCGGGAATTCTTCTTCAGCGTCTACATCAACAAAGAGAAGCGCCTGCAGCTGTCCCGCATGCTCAACCTCACTGACCGTCAAGTCAAAATCTGGTTTCAGAACAGAAGAATGAAGGAAAAAAAAATTAACAGAGACCGTTTACAGTACTACTCAGCTAACCCGCTTCTCTAA

Related Sequences

XP_004839560.1 Protein

Hoxa11 PREDICTED: homeobox protein Hox-A11 [Heterocephalus glaber]

Length: 319 aa      
>XP_004839560.1
MMDFDERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYSYSSNLPQVQPVREVTFREYAIEPATKWHPRGNLAHCYSAEELVHRDCLQAPSAAGVPGDVLAKSSANVYHHPTPAVSSNFYSTVGRNGVLPQAFDQFFETAYGTPENLASSSDYPGDKSAAEKGPPAATATSAAAASAAAATGAPATSSSDGGGGGGGGCREAAAAEEKERRRRPESSSSPESSSGHTEDKAGGPSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRDRLQYYSANPLL