Sequence details NCBI ID: XM_004839462.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc3a1
Gene Name solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
Entrez Gene ID 101712672

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC3A1 ENSCPOG00000009505 (Guinea pig)

Gene Details

solute carrier family 3 (amino acid transporter heavy chain), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008532, Guinea pig)

Protein Percentage 86.57%
CDS Percentage 89.05%
Ka/Ks Ratio 0.28394 (Ka = 0.0759, Ks = 0.2672)

SLC3A1 ENSG00000138079 (Human)

Gene Details

solute carrier family 3 (amino acid transporter heavy chain), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000260649, Human)

Protein Percentage 81.46%
CDS Percentage 85.11%
Ka/Ks Ratio 0.25948 (Ka = 0.1069, Ks = 0.4121)

Slc3a1 ENSMUSG00000024131 (Mouse)

Gene Details

solute carrier family 3, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024944, Mouse)

Protein Percentage 80.7%
CDS Percentage 82.02%
Ka/Ks Ratio 0.17024 (Ka = 0.1093, Ks = 0.6421)

Slc3a1 ENSRNOG00000007006 (Rat)

Gene Details

solute carrier family 3, member 1 (Slc3a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009581, Rat)

Protein Percentage 80.5%
CDS Percentage 82.4%
Ka/Ks Ratio 0.18125 (Ka = 0.1097, Ks = 0.6052)

Genome Location

Sequence Coding sequence

Length: 2187 bp    Location: 25762064..25802716   Strand: +
Raw sequence   
>XM_004839462.1
ATGACTATGTATACTTCCTACACTCTGCGTCCAGCCTCCGTGAGCCAGTTTGTACACAGCACTCAGCAAAACCACCTGTCCACCCTCCTCTCTACAGGAAGGCACTCAGAAGGGCTACAGCCTGGAGACATTGCTGAAGGCAAAGGCAAGGGAGACTCCATCAGGATGAGTATGAAAGGATGTCAGACAAACAATGGCTTTGTCCAAAATGAAGACACCCCAGAACTGGAACTGGATCCCATCAGCTCCGTGGACAGCCCACAGCACCAGGCTCTGAGCATCATGGGCCCAGAGGAGCTCAGCCTCCAGGGTGTGCGGCCCTATGCTGGGATGCCCAAGGATGTGCTGTTCCAATTCTCAGGCCAGGCCTGCTACCGAGTGCCCCGGGAGATCCTCTTCTGGCTCACCATTGTGACTGTGGTCCTGCTCATTGGGGCTACTGTGGCTATCATCGCCGTCTCTCCAAAGTGCCTGGACTGGTGGCAGGCAGGGCCCATGTACCAGATCTACCCAAGGTCTTTCAGGGACAGCGACAAGGATGGGAATGGAGATCTGAAAGGTATTCAAGATAAACTGGACTACATCACTACTTTGAATATAAAAACTATTTGGATCACTTCATTTTATAAATCATCCCTGAAAGATTTCAGATACGGTGTTGAAGATTTCCAAGAAATTGATCCTACTTTTGGAACAATGAAAGATTTTGAGAATCTGCTTGCAGCCATACATGATAAAGGTTTAAAATTAATAATTGATTTCATACCAAACCACACCAGCGATAAACATCCTTGGTTTGAAATGAGTAGGACATGGACTGGGAAATACACTGATTATTACATCTGGCGTGACTGTACCCATGAAAACGGCATAACCATCCCACCCAACAACTGGTTAAGTGTATATGGAAACTCCAGTTGGCACTTTGATGAAGTGCGACAGCAATGTTATTACCACCAGTTTTTGAAAGAGCAACCTGATTTAAATTTCCGAAATCCTGATGTTCAAGAAGAAATAAAAGAAATAATACAGTTCTGGCTCTTGAAGGGTGTTGATGGCTTTAGTTTCGATGCTGTTAAATTTCTTCTAGAAGCAAAAGATCTGAGAGATGAGATCCAAGTCAATAAGTCCCAAAACCCGGACACTGTCACTCGCTACTCAGAGCTGTACCATGACTTCACCACTACCCAAGTGGGAATGCACGACCTTGTCCGGAGCTTCCGGCAGACCATGGACCAATACAGCCGGGAGCCTGGGAGATACAGATTCATGGGGACAGAAGCCTATGCAGAGAGCATCGACAGGACCATGATGTACTATGGGCTGCCATTTATCCAAGAAGCTGATTTCCCTTTCAACAATTACTTTACCACCCTCTATACTCTTTCTGGGAACATTGTGCATGAGGTTATCACATCCTGGATGAAAAACATGCCAGAAGGAAAATGGCCTAATTGGATGACTGGTGGACCAGACAATACTCGGCTGACCTCTCGTTTGGGGAACCAATATGTCAACACCATGAACATGCTGCTTTTTACACTCCCTGGAACTCCTATCACTTACTATGGAGAAGAAATAGGGATGCAAGATATTTTAGCCACAAATCTCGAAGAAAGCTATGATACTAGTACTCTTCTTTCAAAGTCACCGATGCAGTGGGATAACAGCTCCAATGCCGGGTTTTCTGAAGGCAATCACACTTGGTTACCCACCAATTCAGATTATCACATTGTCAATGTTGACGTCCAAAAGACTCAGCCTAGTTCAACTTTGAAACTGTATCAAGATTTAGGTCTACTTCATGCCAATGAGCTGCTCCTCAACAGGGGCTGGTTTTGCCTTTTGAGCAATAACAGCCACTATGTTGTGTACACAAGGGAACTGGATGGCATTGACAGAGTCTTTCTGATGGTTCTGAATTTTGGAGACTCAACACTGCTAAATCTACAGGAAATGAATTTAGGTCTTCCTACAAAACTGAGAGTAAGACTGAGTACCAATCCTGCCTCCCAACACAGTGAAGTTGACACGTCTGGCATTTCTCTGGAGGAGGGAGAAGGATTAATCCTTGAATACAACACGAAGAATCTCCTTCATCAGCAAACAGCATTCAGAGACAAATGTTTTATTTCCAATCGGGCCTGCTACTCCAGTGCCTTCAACATATTGTACAGTGTGTGCTAA

Related Sequences

XP_004839519.1 Protein

Slc3a1 PREDICTED: neutral and basic amino acid transport protein rBAT [Heterocephalus glaber]

Length: 728 aa      View alignments
>XP_004839519.1
MTMYTSYTLRPASVSQFVHSTQQNHLSTLLSTGRHSEGLQPGDIAEGKGKGDSIRMSMKGCQTNNGFVQNEDTPELELDPISSVDSPQHQALSIMGPEELSLQGVRPYAGMPKDVLFQFSGQACYRVPREILFWLTIVTVVLLIGATVAIIAVSPKCLDWWQAGPMYQIYPRSFRDSDKDGNGDLKGIQDKLDYITTLNIKTIWITSFYKSSLKDFRYGVEDFQEIDPTFGTMKDFENLLAAIHDKGLKLIIDFIPNHTSDKHPWFEMSRTWTGKYTDYYIWRDCTHENGITIPPNNWLSVYGNSSWHFDEVRQQCYYHQFLKEQPDLNFRNPDVQEEIKEIIQFWLLKGVDGFSFDAVKFLLEAKDLRDEIQVNKSQNPDTVTRYSELYHDFTTTQVGMHDLVRSFRQTMDQYSREPGRYRFMGTEAYAESIDRTMMYYGLPFIQEADFPFNNYFTTLYTLSGNIVHEVITSWMKNMPEGKWPNWMTGGPDNTRLTSRLGNQYVNTMNMLLFTLPGTPITYYGEEIGMQDILATNLEESYDTSTLLSKSPMQWDNSSNAGFSEGNHTWLPTNSDYHIVNVDVQKTQPSSTLKLYQDLGLLHANELLLNRGWFCLLSNNSHYVVYTRELDGIDRVFLMVLNFGDSTLLNLQEMNLGLPTKLRVRLSTNPASQHSEVDTSGISLEEGEGLILEYNTKNLLHQQTAFRDKCFISNRACYSSAFNILYSVC